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Sequence, Chains, Asymmetric and Biological Units

Title OPEN AND CLOSED FORMS OF WILD-TYPE HUMAN PRP8 RNASE H-LIKE D BOUND CO ION
Keywords METALLOPROTEIN, CONFORMATIONAL CHANGE, RNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4JK9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PRE-MRNA-PROCESSING-SPLICING FACTOR 8  A 219 1783 0
2  Protein   PRE-MRNA-PROCESSING-SPLICING FACTOR 8  B 220 1792 0
3  Ligand   PRE-MRNA-PROCESSING-SPLICING FACTOR 8  A 4 0 9
4  Ligand   PRE-MRNA-PROCESSING-SPLICING FACTOR 8  B 6 0 6
5 Water     518 0 518
total       967 3575 533

Proteins
Unit 1 LEU1771 PHE1772 SER1773 GLN1775 ILE1776 ILE1777 TRP1778 PHE1779 VAL1780 ASP1781 ASP1782 THR1783 ASN1784 VAL1785 TYR1786 ARG1787 VAL1788 THR1789 ILE1790 HIS1791 LYS1792 THR1793 PHE1794 GLU1795 GLY1796 ASN1797 LEU1798 THR1799 THR1800 LYS1801 PRO1802 ILE1803 ASN1804 GLY1805 ALA1806 ILE1807 PHE1808 ILE1809 PHE1810 ASN1811 PRO1812 ARG1813 THR1814 GLY1815 GLN1816 LEU1817 PHE1818 LEU1819 LYS1820 ILE1821 ILE1822 HIS1823 THR1824 SER1825 VAL1826 TRP1827 ALA1828 GLY1829 GLN1830 LYS1831 ARG1832 LEU1833 GLY1834 GLN1835 LEU1836 ALA1837 LYS1838 TRP1839 LYS1840 THR1841 ALA1842 GLU1843 GLU1844 VAL1845 ALA1846 ALA1847 LEU1848 ILE1849 ARG1850 SER1851 LEU1852 PRO1853 VAL1854 GLU1855 GLU1856 GLN1857 PRO1858 LYS1859 GLN1860 ILE1861 ILE1862 VAL1863 THR1864 ARG1865 LYS1866 GLY1867 MET1868 LEU1869 ASP1870 PRO1871 LEU1872 GLU1873 VAL1874 HIS1875 LEU1876 LEU1877 ASP1878 PHE1879 PRO1880 ASN1881 ILE1882 VAL1883 ILE1884 LYS1885 GLY1886 SER1887 GLU1888 LEU1889 GLN1890 LEU1891 PRO1892 PHE1893 GLN1894 ALA1895 CYS1896 LEU1897 LYS1898 VAL1899 GLU1900 LYS1901 PHE1902 GLY1903 ASP1904 LEU1905 ILE1906 LEU1907 LYS1908 ALA1909 THR1910 GLU1911 PRO1912 GLN1913 MET1914 VAL1915 LEU1916 PHE1917 ASN1918 LEU1919 TYR1920 ASP1921 ASP1922 TRP1923 LEU1924 LYS1925 THR1926 ILE1927 SER1928 SER1929 TYR1930 THR1931 ALA1932 PHE1933 SER1934 ARG1935 LEU1936 ILE1937 LEU1938 ILE1939 LEU1940 ARG1941 ALA1942 LEU1943 HIS1944 VAL1945 ASN1946 ASN1947 ASP1948 ARG1949 ALA1950 LYS1951 VAL1952 ILE1953 LEU1954 LYS1955 PRO1956 ASP1957 LYS1958 THR1959 THR1960 ILE1961 THR1962 GLU1963 PRO1964 HIS1965 HIS1966 ILE1967 TRP1968 PRO1969 THR1970 LEU1971 THR1972 ASP1973 GLU1974 GLU1975 TRP1976 ILE1977 LYS1978 VAL1979 GLU1980 VAL1981 GLN1982 LEU1983 LYS1984 ASP1985 LEU1986 ILE1987 LEU1988 ALA1989 ASP1990
Unit 2 GLU1770 LEU1771 PHE1772 SER1773 ASN1774 GLN1775 ILE1776 ILE1777 TRP1778 PHE1779 VAL1780 ASP1781 ASP1782 THR1783 ASN1784 VAL1785 TYR1786 ARG1787 VAL1788 THR1789 ILE1790 HIS1791 LYS1792 THR1793 PHE1794 GLU1795 GLY1796 ASN1797 LEU1798 THR1799 THR1800 LYS1801 PRO1802 ILE1803 ASN1804 GLY1805 ALA1806 ILE1807 PHE1808 ILE1809 PHE1810 ASN1811 PRO1812 ARG1813 THR1814 GLY1815 GLN1816 LEU1817 PHE1818 LEU1819 LYS1820 ILE1821 ILE1822 HIS1823 THR1824 SER1825 VAL1826 TRP1827 ALA1828 GLY1829 GLN1830 LYS1831 ARG1832 LEU1833 GLY1834 GLN1835 LEU1836 ALA1837 LYS1838 TRP1839 LYS1840 THR1841 ALA1842 GLU1843 GLU1844 VAL1845 ALA1846 ALA1847 LEU1848 ILE1849 ARG1850 SER1851 LEU1852 PRO1853 VAL1854 GLU1855 GLU1856 GLN1857 PRO1858 LYS1859 GLN1860 ILE1861 ILE1862 VAL1863 THR1864 ARG1865 LYS1866 GLY1867 MET1868 LEU1869 ASP1870 PRO1871 LEU1872 GLU1873 VAL1874 HIS1875 LEU1876 LEU1877 ASP1878 PHE1879 PRO1880 ASN1881 ILE1882 VAL1883 ILE1884 LYS1885 GLY1886 SER1887 GLU1888 LEU1889 GLN1890 LEU1891 PRO1892 PHE1893 GLN1894 ALA1895 CYS1896 LEU1897 LYS1898 VAL1899 GLU1900 LYS1901 PHE1902 GLY1903 ASP1904 LEU1905 ILE1906 LEU1907 LYS1908 ALA1909 THR1910 GLU1911 PRO1912 GLN1913 MET1914 VAL1915 LEU1916 PHE1917 ASN1918 LEU1919 TYR1920 ASP1921 ASP1922 TRP1923 LEU1924 LYS1925 THR1926 ILE1927 SER1928 SER1929 TYR1930 THR1931 ALA1932 PHE1933 SER1934 ARG1935 LEU1936 ILE1937 LEU1938 ILE1939 LEU1940 ARG1941 ALA1942 LEU1943 HIS1944 VAL1945 ASN1946 ASN1947 ASP1948 ARG1949 ALA1950 LYS1951 VAL1952 ILE1953 LEU1954 LYS1955 PRO1956 ASP1957 LYS1958 THR1959 THR1960 ILE1961 THR1962 GLU1963 PRO1964 HIS1965 HIS1966 ILE1967 TRP1968 PRO1969 THR1970 LEU1971 THR1972 ASP1973 GLU1974 GLU1975 TRP1976 ILE1977 LYS1978 VAL1979 GLU1980 VAL1981 GLN1982 LEU1983 LYS1984 ASP1985 LEU1986 ILE1987 LEU1988 ALA1989

Ligands
Unit 3 CO2001 CO2002 GOL2003 CL2004
Unit 4 CO2001 CO2002 CO2003 CO2004 CL2005 CL2006

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany