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Sequence, Chains, Asymmetric and Biological Units

Title ALIX V DOMAIN
Keywords UBIQUITIN, ENDOSOME, MEMBRANE TRAFFICKING, VIRUS BUDDING, ES PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4JJY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN  A 342 2666 32
2  Protein   PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN  B 342 2666 32
total       684 5332 64

Proteins
Unit 1 VAL361 SER362 VAL363 GLN364 GLN365 SER366 LEU367 ALA368 ALA369 TYR370 ASN371 GLN372 ARG373 LYS374 ALA375 ASP376 LEU377 VAL378 ASN379 ARG380 SER381 ILE382 ALA383 GLN384 MSE385 ARG386 GLU387 ALA388 THR389 THR390 LEU391 ALA392 ASN393 GLY394 VAL395 LEU396 ALA397 SER398 LEU399 ASN400 LEU401 PRO402 ALA403 ALA404 ILE405 GLU406 ASP407 VAL408 SER409 GLY410 ASP411 THR412 VAL413 PRO414 GLN415 SER416 ILE417 LEU418 THR419 LYS420 SER421 ARG422 SER423 VAL424 ILE425 GLU426 GLN427 GLY428 GLY429 ILE430 GLN431 THR432 VAL433 ASP434 GLN435 LEU436 ILE437 LYS438 GLU439 LEU440 PRO441 GLU442 LEU443 LEU444 GLN445 ARG446 ASN447 ARG448 GLU449 ILE450 LEU451 ASP452 GLU453 SER454 LEU455 ARG456 LEU457 LEU458 ASP459 GLU460 GLU461 GLU462 ALA463 THR464 ASP465 ASN466 ASP467 LEU468 ARG469 ALA470 LYS471 PHE472 LYS473 GLU474 ARG475 TRP476 GLN477 ARG478 THR479 PRO480 SER481 ASN482 GLU483 LEU484 TYR485 LYS486 PRO487 LEU488 ARG489 ALA490 GLU491 GLY492 THR493 ASN494 PHE495 ARG496 THR497 VAL498 LEU499 ASP500 LYS501 ALA502 VAL503 GLN504 ALA505 ASP506 GLY507 GLN508 VAL509 LYS510 GLU511 CYS512 TYR513 GLN514 SER515 HIS516 ARG517 ASP518 THR519 ILE520 VAL521 LEU522 LEU523 CYS524 LYS525 PRO526 GLU527 PRO528 GLU529 LEU530 ASN531 ALA532 ALA533 ILE534 PRO535 SER536 ALA537 ASN538 PRO539 ALA540 LYS541 THR542 MSE543 GLN544 GLY545 SER546 GLU547 VAL548 VAL549 ASN550 VAL551 LEU552 LYS553 SER554 LEU555 LEU556 SER557 ASN558 LEU559 ASP560 GLU561 VAL562 LYS563 LYS564 GLU565 ARG566 GLU567 GLY568 LEU569 GLU570 ASN571 ASP572 LEU573 LYS574 SER575 VAL576 ASN577 PHE578 ASP579 MSE580 THR581 SER582 LYS583 PHE584 LEU585 THR586 ALA587 LEU588 ALA589 GLN590 ASP591 GLY592 VAL593 ILE594 ASN595 GLU596 GLU597 ALA598 LEU599 SER600 VAL601 THR602 GLU603 LEU604 ASP605 ARG606 VAL607 TYR608 GLY609 GLY610 LEU611 THR612 THR613 LYS614 VAL615 GLN616 GLU617 SER618 LEU619 LYS620 LYS621 GLN622 GLU623 GLY624 LEU625 LEU626 LYS627 ASN628 ILE629 GLN630 VAL631 SER632 HIS633 GLN634 GLU635 PHE636 SER637 LYS638 MSE639 LYS640 GLN641 SER642 ASN643 ASN644 GLU645 ALA646 ASN647 LEU648 ARG649 GLU650 GLU651 VAL652 LEU653 LYS654 ASN655 LEU656 ALA657 THR658 ALA659 TYR660 ASP661 ASN662 PHE663 VAL664 GLU665 LEU666 VAL667 ALA668 ASN669 LEU670 LYS671 GLU672 GLY673 THR674 LYS675 PHE676 TYR677 ASN678 GLU679 LEU680 THR681 GLU682 ILE683 LEU684 VAL685 ARG686 PHE687 GLN688 ASN689 LYS690 CYS691 SER692 ASP693 ILE694 VAL695 PHE696 ALA697 ARG698 LYS699 THR700 GLU701 ARG702
Unit 2 VAL361 SER362 VAL363 GLN364 GLN365 SER366 LEU367 ALA368 ALA369 TYR370 ASN371 GLN372 ARG373 LYS374 ALA375 ASP376 LEU377 VAL378 ASN379 ARG380 SER381 ILE382 ALA383 GLN384 MSE385 ARG386 GLU387 ALA388 THR389 THR390 LEU391 ALA392 ASN393 GLY394 VAL395 LEU396 ALA397 SER398 LEU399 ASN400 LEU401 PRO402 ALA403 ALA404 ILE405 GLU406 ASP407 VAL408 SER409 GLY410 ASP411 THR412 VAL413 PRO414 GLN415 SER416 ILE417 LEU418 THR419 LYS420 SER421 ARG422 SER423 VAL424 ILE425 GLU426 GLN427 GLY428 GLY429 ILE430 GLN431 THR432 VAL433 ASP434 GLN435 LEU436 ILE437 LYS438 GLU439 LEU440 PRO441 GLU442 LEU443 LEU444 GLN445 ARG446 ASN447 ARG448 GLU449 ILE450 LEU451 ASP452 GLU453 SER454 LEU455 ARG456 LEU457 LEU458 ASP459 GLU460 GLU461 GLU462 ALA463 THR464 ASP465 ASN466 ASP467 LEU468 ARG469 ALA470 LYS471 PHE472 LYS473 GLU474 ARG475 TRP476 GLN477 ARG478 THR479 PRO480 SER481 ASN482 GLU483 LEU484 TYR485 LYS486 PRO487 LEU488 ARG489 ALA490 GLU491 GLY492 THR493 ASN494 PHE495 ARG496 THR497 VAL498 LEU499 ASP500 LYS501 ALA502 VAL503 GLN504 ALA505 ASP506 GLY507 GLN508 VAL509 LYS510 GLU511 CYS512 TYR513 GLN514 SER515 HIS516 ARG517 ASP518 THR519 ILE520 VAL521 LEU522 LEU523 CYS524 LYS525 PRO526 GLU527 PRO528 GLU529 LEU530 ASN531 ALA532 ALA533 ILE534 PRO535 SER536 ALA537 ASN538 PRO539 ALA540 LYS541 THR542 MSE543 GLN544 GLY545 SER546 GLU547 VAL548 VAL549 ASN550 VAL551 LEU552 LYS553 SER554 LEU555 LEU556 SER557 ASN558 LEU559 ASP560 GLU561 VAL562 LYS563 LYS564 GLU565 ARG566 GLU567 GLY568 LEU569 GLU570 ASN571 ASP572 LEU573 LYS574 SER575 VAL576 ASN577 PHE578 ASP579 MSE580 THR581 SER582 LYS583 PHE584 LEU585 THR586 ALA587 LEU588 ALA589 GLN590 ASP591 GLY592 VAL593 ILE594 ASN595 GLU596 GLU597 ALA598 LEU599 SER600 VAL601 THR602 GLU603 LEU604 ASP605 ARG606 VAL607 TYR608 GLY609 GLY610 LEU611 THR612 THR613 LYS614 VAL615 GLN616 GLU617 SER618 LEU619 LYS620 LYS621 GLN622 GLU623 GLY624 LEU625 LEU626 LYS627 ASN628 ILE629 GLN630 VAL631 SER632 HIS633 GLN634 GLU635 PHE636 SER637 LYS638 MSE639 LYS640 GLN641 SER642 ASN643 ASN644 GLU645 ALA646 ASN647 LEU648 ARG649 GLU650 GLU651 VAL652 LEU653 LYS654 ASN655 LEU656 ALA657 THR658 ALA659 TYR660 ASP661 ASN662 PHE663 VAL664 GLU665 LEU666 VAL667 ALA668 ASN669 LEU670 LYS671 GLU672 GLY673 THR674 LYS675 PHE676 TYR677 ASN678 GLU679 LEU680 THR681 GLU682 ILE683 LEU684 VAL685 ARG686 PHE687 GLN688 ASN689 LYS690 CYS691 SER692 ASP693 ILE694 VAL695 PHE696 ALA697 ARG698 LYS699 THR700 GLU701 ARG702

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany