4JGS - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE XMRV TM RETROVIRAL FUSION CORE
• Keywords: SIX HELIX BUNDLE, VIRAL-HOST MEMBRANE FUSION, XMRV TM, VIRAL VIRAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JGS	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	A	82	634	0
2	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	B	82	620	0
3	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	C	88	668	0
4	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	D	85	645	0
5	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	E	84	633	0
6	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	F	80	606	0
7	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	G	90	693	0
8	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	H	84	633	0
9	Protein	MLV-RELATED PROVIRAL ENV POLYPROTEIN	I	82	616	0
10	Ligand	MLV-RELATED PROVIRAL ENV POLYPROTEIN	A	1	0	1
11	Ligand	MLV-RELATED PROVIRAL ENV POLYPROTEIN	B	1	0	1
12	Ligand	MLV-RELATED PROVIRAL ENV POLYPROTEIN	C	1	0	1
13	Water			301	0	301
total				1061	5748	304

Proteins

Unit 1	PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559 GLN 560 ARG 561
Unit 2	LYS 478 GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559
Unit 3	ALA 476 THR 477 LYS 478 GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559 GLN 560 ARG 561 GLN 562 ARG 563
Unit 4	ALA 476 THR 477 LYS 478 GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559 GLN 560
Unit 5	LYS 478 GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559 GLN 560 ARG 561
Unit 6	PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559
Unit 7	LYS 478 GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559 GLN 560 ARG 561 GLN 562 ARG 563 LEU 564 PHE 565 GLU 566 SER 567
Unit 8	ALA 476 THR 477 LYS 478 GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559
Unit 9	GLN 479 PHE 480 GLU 481 GLN 482 LEU 483 GLN 484 ALA 485 ALA 486 ILE 487 HIS 488 THR 489 ASP 490 LEU 491 GLY 492 ALA 493 LEU 494 GLU 495 LYS 496 SER 497 VAL 498 SER 499 ALA 500 LEU 501 GLU 502 LYS 503 SER 504 LEU 505 THR 506 SER 507 LEU 508 SER 509 GLU 510 VAL 511 VAL 512 LEU 513 GLN 514 ASN 515 ARG 516 ARG 517 GLY 518 LEU 519 ASP 520 LEU 521 LEU 522 PHE 523 LEU 524 LYS 525 GLU 526 GLY 527 GLY 528 LEU 529 CYS 530 ALA 531 ALA 532 LEU 533 LYS 534 GLU 535 GLU 536 CYS 537 SER 538 PHE 539 TYR 540 ALA 541 ASP 542 HIS 543 THR 544 GLY 545 VAL 546 VAL 547 ARG 548 ASP 549 SER 550 MET 551 ALA 552 LYS 553 LEU 554 ARG 555 GLU 556 ARG 557 LEU 558 ASN 559 GLN 560

Ligands

Unit 10	CL 601
Unit 11	CL 601
Unit 12	CL 601