4JDV - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GERM-LINE PRECURSOR OF NIH45-46 FAB
• Keywords: IG FOLD, ANTI HIV ANTIBODY, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JDV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FAB HEAVY CHAIN	A	227	1737	0
2	Protein	FAB LIGHT CHAIN	B	208	1604	0
3	Protein	FAB HEAVY CHAIN	H	215	1652	0
4	Protein	FAB LIGHT CHAIN	L	209	1613	0
5	Ligand	FAB HEAVY CHAIN	A	4	0	24
6	Ligand	FAB LIGHT CHAIN	B	2	0	11
7	Ligand	FAB HEAVY CHAIN	H	2	0	24
8	Ligand	FAB LIGHT CHAIN	L	2	0	21
9	Water			911	0	911
total				1780	6606	991

Proteins

Unit 1	VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 GLY 31 TYR 32 TYR 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 TRP 50 ILE 51 ASN 52 PRO 52A ASN 53 SER 54 GLY 55 GLY 56 THR 57 ASN 58 TYR 59 ALA 60 GLN 61 LYS 62 PHE 63 GLN 64 GLY 65 ARG 66 VAL 67 THR 68 MET 69 THR 70 ARG 71 ASP 72 THR 73 SER 74 ILE 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A ARG 82B LEU 82C ARG 83 SER 84 ASP 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 GLY 95 LYS 96 TYR 97 CYS 98 THR 99 ALA 99A ARG 99B ASP 99C TYR 99D TYR 100 ASN 101 TRP 102 ASP 103 PHE 104 GLN 105 HIS 106 TRP 107 GLY 108 GLN 109 GLY 110 THR 111 LEU 112 VAL 113 THR 114 VAL 115 SER 116 SER 117 ALA 118 SER 119 THR 120 LYS 121 GLY 122 PRO 123 SER 124 VAL 125 PHE 126 PRO 127 LEU 128 ALA 129 PRO 130 SER 131 SER 132 LYS 133 GLY 138 THR 139 ALA 140 ALA 141 LEU 142 GLY 143 CYS 144 LEU 145 VAL 146 LYS 147 ASP 148 TYR 149 PHE 150 PRO 151 GLU 152 PRO 153 VAL 154 THR 155 VAL 156 SER 157 TRP 158 ASN 159 SER 160 GLY 161 ALA 162 LEU 163 THR 164 SER 165 GLY 166 VAL 167 HIS 168 THR 169 PHE 170 PRO 171 ALA 172 VAL 173 LEU 174 GLN 175 SER 176 SER 177 GLY 178 LEU 179 TYR 180 SER 181 LEU 182 SER 183 SER 184 VAL 185 VAL 186 THR 187 VAL 188 PRO 189 SER 190 SER 191 SER 192 LEU 193 GLY 194 THR 195 GLN 196 THR 197 TYR 198 ILE 199 CYS 200 ASN 201 VAL 202 ASN 203 HIS 204 LYS 205 PRO 206 SER 207 ASN 208 THR 209 LYS 210 VAL 211 ASP 212 LYS 213 ARG 214 VAL 215 GLU 216 PRO 217 LYS 218 SER 219 CYS 220 ASP 221 LYS 222 THR 223 HIS 224
Unit 2	ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 LEU 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 VAL 29 SER 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 ALA 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 ASN 53 ARG 54 ALA 55 THR 56 GLY 57 ILE 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLU 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 TYR 91 GLU 92 PHE 93 PHE 94 GLY 95 GLN 96 GLY 97 THR 98 LYS 99 LEU 100 GLU 101 ILE 102 LYS 103 ARG 104 THR 105 VAL 106 ALA 107 ALA 108 PRO 109 SER 110 VAL 111 PHE 112 ILE 113 PHE 114 PRO 115 PRO 116 SER 117 ASP 118 GLU 119 GLN 120 LEU 121 LYS 122 SER 123 GLY 124 THR 125 ALA 126 SER 127 VAL 128 VAL 129 CYS 130 LEU 131 LEU 132 ASN 133 ASN 134 PHE 135 TYR 136 PRO 137 ARG 138 GLU 139 ALA 140 LYS 141 VAL 142 GLN 143 TRP 144 LYS 145 VAL 146 ASP 147 ASN 148 ALA 149 LEU 150 GLN 151 SER 152 GLY 153 ASN 154 SER 155 GLN 156 GLU 157 SER 158 VAL 159 THR 160 GLU 161 GLN 162 ASP 163 SER 164 LYS 165 ASP 166 SER 167 THR 168 TYR 169 SER 170 LEU 171 SER 172 SER 173 THR 174 LEU 175 THR 176 LEU 177 SER 178 LYS 179 ALA 180 ASP 181 TYR 182 GLU 183 LYS 184 HIS 185 LYS 186 VAL 187 TYR 188 ALA 189 CYS 190 GLU 191 VAL 192 THR 193 HIS 194 GLN 195 GLY 196 LEU 197 SER 198 SER 199 PRO 200 VAL 201 THR 202 LYS 203 SER 204 PHE 205 ASN 206 ARG 207 GLY 208 GLU 209
Unit 3	VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 GLY 31 TYR 32 TYR 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 TRP 50 ILE 51 ASN 52 PRO 52A ASN 53 SER 54 GLY 55 GLY 56 THR 57 ASN 58 TYR 59 ALA 60 GLN 61 LYS 62 PHE 63 GLN 64 GLY 65 ARG 66 VAL 67 THR 68 MET 69 THR 70 ARG 71 ASP 72 THR 73 SER 74 ILE 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A ARG 82B LEU 82C ARG 83 SER 84 ASP 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 GLY 95 LYS 96 TYR 97 CYS 98 THR 99 ALA 99A ARG 99B ASP 99C TYR 99D TYR 100 ASN 101 TRP 102 ASP 103 PHE 104 GLN 105 HIS 106 TRP 107 GLY 108 GLN 109 GLY 110 THR 111 LEU 112 VAL 113 THR 114 VAL 115 SER 116 SER 117 ALA 118 SER 119 THR 120 LYS 121 GLY 122 PRO 123 SER 124 VAL 125 PHE 126 PRO 127 LEU 128 ALA 129 PRO 130 SER 131 THR 139 ALA 140 ALA 141 LEU 142 GLY 143 CYS 144 LEU 145 VAL 146 LYS 147 ASP 148 TYR 149 PHE 150 PRO 151 GLU 152 PRO 153 VAL 154 THR 155 VAL 156 SER 157 TRP 158 ASN 159 SER 160 GLY 161 ALA 162 LEU 163 THR 164 SER 165 GLY 166 VAL 167 HIS 168 THR 169 PHE 170 PRO 171 ALA 172 VAL 173 LEU 174 GLN 175 SER 176 SER 177 GLY 178 LEU 179 TYR 180 SER 181 LEU 182 SER 183 SER 184 VAL 185 VAL 186 THR 187 VAL 188 PRO 189 SER 190 SER 191 SER 192 LEU 193 GLN 196 THR 197 TYR 198 ILE 199 CYS 200 ASN 201 VAL 202 ASN 203 HIS 204 LYS 205 PRO 206 SER 207 ASN 208 THR 209 LYS 210 VAL 211 ASP 212 LYS 213 ARG 214 VAL 215 GLU 216 PRO 217
Unit 4	GLU 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 LEU 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 VAL 29 SER 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 ALA 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 ASN 53 ARG 54 ALA 55 THR 56 GLY 57 ILE 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLU 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 TYR 91 GLU 92 PHE 93 PHE 94 GLY 95 GLN 96 GLY 97 THR 98 LYS 99 LEU 100 GLU 101 ILE 102 LYS 103 ARG 104 THR 105 VAL 106 ALA 107 ALA 108 PRO 109 SER 110 VAL 111 PHE 112 ILE 113 PHE 114 PRO 115 PRO 116 SER 117 ASP 118 GLU 119 GLN 120 LEU 121 LYS 122 SER 123 GLY 124 THR 125 ALA 126 SER 127 VAL 128 VAL 129 CYS 130 LEU 131 LEU 132 ASN 133 ASN 134 PHE 135 TYR 136 PRO 137 ARG 138 GLU 139 ALA 140 LYS 141 VAL 142 GLN 143 TRP 144 LYS 145 VAL 146 ASP 147 ASN 148 ALA 149 LEU 150 GLN 151 SER 152 GLY 153 ASN 154 SER 155 GLN 156 GLU 157 SER 158 VAL 159 THR 160 GLU 161 GLN 162 ASP 163 SER 164 LYS 165 ASP 166 SER 167 THR 168 TYR 169 SER 170 LEU 171 SER 172 SER 173 THR 174 LEU 175 THR 176 LEU 177 SER 178 LYS 179 ALA 180 ASP 181 TYR 182 GLU 183 LYS 184 HIS 185 LYS 186 VAL 187 TYR 188 ALA 189 CYS 190 GLU 191 VAL 192 THR 193 HIS 194 GLN 195 GLY 196 LEU 197 SER 198 SER 199 PRO 200 VAL 201 THR 202 LYS 203 SER 204 PHE 205 ASN 206 ARG 207 GLY 208 GLU 209

Ligands

Unit 5	SO4 301 SO4 302 GOL 303 144 304
Unit 6	SO4 301 GOL 302
Unit 7	144 301 1PE 302
Unit 8	SO4 301 1PE 302