4JDF - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A POTF MUTANT COMPLEXED WITH SPERMIDINE
• Keywords: PERIPLASMIC BINDING PROTEIN-LIKE II, POLYAMINE RECEPTOR, SPE BINDING PROTEIN, PROTEIN BINDING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JDF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PUTRESCINE-BINDING PERIPLASMIC PROTEIN	A	341	2668	0
2	Ligand	PUTRESCINE-BINDING PERIPLASMIC PROTEIN	A	1	0	10
3	Water			378	0	378
total				720	2668	388

Proteins

Unit 1

GLN 29 LYS 30 THR 31 LEU 32 HIS 33 ILE 34 TYR 35 ASN 36 TRP 37 THR 38 GLU 39 TYR 40 ILE 41 ALA 42 PRO 43 ASP 44 THR 45 VAL 46 ALA 47 ASN 48 PHE 49 GLU 50 LYS 51 GLU 52 THR 53 GLY 54 ILE 55 LYS 56 VAL 57 VAL 58 TYR 59 ASP 60 VAL 61 PHE 62 ASP 63 SER 64 ASN 65 GLU 66 VAL 67 LEU 68 GLU 69 GLY 70 LYS 71 LEU 72 MET 73 ALA 74 GLY 75 SER 76 THR 77 GLY 78 PHE 79 ASP 80 LEU 81 VAL 82 VAL 83 PRO 84 SER 85 ALA 86 TYR 87 PHE 88 LEU 89 GLU 90 ARG 91 GLN 92 LEU 93 THR 94 ALA 95 GLY 96 VAL 97 PHE 98 GLN 99 PRO 100 LEU 101 ASP 102 LYS 103 SER 104 LYS 105 LEU 106 PRO 107 GLU 108 TRP 109 LYS 110 ASN 111 LEU 112 ASP 113 PRO 114 GLU 115 LEU 116 LEU 117 LYS 118 LEU 119 VAL 120 ALA 121 LYS 122 HIS 123 ASP 124 PRO 125 ASP 126 ASN 127 LYS 128 PHE 129 ALA 130 MET 131 PRO 132 TYR 133 MET 134 TRP 135 ALA 136 THR 137 THR 138 GLY 139 ILE 140 GLY 141 TYR 142 ASN 143 VAL 144 ASP 145 LYS 146 VAL 147 LYS 148 ALA 149 VAL 150 LEU 151 GLY 152 GLU 153 ASN 154 ALA 155 PRO 156 VAL 157 ASP 158 SER 159 TRP 160 ASP 161 LEU 162 ILE 163 LEU 164 LYS 165 PRO 166 GLU 167 ASN 168 LEU 169 GLU 170 LYS 171 LEU 172 LYS 173 SER 174 CYS 175 GLY 176 VAL 177 SER 178 PHE 179 LEU 180 ASP 181 ASP 182 PRO 183 GLU 184 GLU 185 VAL 186 PHE 187 ALA 188 THR 189 VAL 190 LEU 191 ASN 192 TYR 193 LEU 194 GLY 195 LYS 196 ASP 197 PRO 198 ASN 199 SER 200 THR 201 LYS 202 ALA 203 ASP 204 ASP 205 TYR 206 THR 207 GLY 208 PRO 209 ALA 210 THR 211 ASP 212 LEU 213 LEU 214 LEU 215 LYS 216 LEU 217 ARG 218 PRO 219 ASN 220 ILE 221 ARG 222 TYR 223 PHE 224 HIS 225 SER 226 SER 227 GLN 228 TYR 229 ILE 230 ASN 231 ASP 232 LEU 233 ALA 234 ASN 235 GLY 236 ASP 237 ILE 238 CYS 239 VAL 240 ALA 241 ILE 242 GLY 243 TRP 244 ALA 245 GLY 246 SER 247 VAL 248 TRP 249 GLN 250 ALA 251 SER 252 ASN 253 ARG 254 ALA 255 LYS 256 GLU 257 ALA 258 LYS 259 ASN 260 GLY 261 VAL 262 ASN 263 VAL 264 SER 265 PHE 266 SER 267 ILE 268 PRO 269 LYS 270 GLU 271 GLY 272 ALA 273 MET 274 ALA 275 TRP 276 PHE 277 ASP 278 VAL 279 PHE 280 ALA 281 MET 282 PRO 283 ALA 284 ASP 285 ALA 286 LYS 287 ASN 288 LYS 289 ASP 290 GLU 291 ALA 292 TYR 293 GLN 294 PHE 295 LEU 296 ASN 297 TYR 298 LEU 299 LEU 300 ARG 301 PRO 302 ASP 303 VAL 304 VAL 305 ALA 306 HIS 307 ILE 308 SER 309 ASP 310 HIS 311 VAL 312 PHE 313 TYR 314 ALA 315 ASN 316 ALA 317 ASN 318 LYS 319 ALA 320 ALA 321 THR 322 PRO 323 LEU 324 VAL 325 SER 326 ALA 327 GLU 328 VAL 329 ARG 330 GLU 331 ASN 332 PRO 333 GLY 334 ILE 335 TYR 336 PRO 337 PRO 338 ALA 339 ASP 340 VAL 341 ARG 342 ALA 343 LYS 344 LEU 345 PHE 346 THR 347 GLN 348 LYS 349 VAL 350 GLN 351 ASP 352 PRO 353 LYS 354 ILE 355 ASP 356 ARG 357 VAL 358 ARG 359 THR 360 ARG 361 ALA 362 TRP 363 THR 364 LYS 365 VAL 366 LYS 367 SER 368 GLY 369

Ligands

Unit 2

SPD 401