|
[Image Library Home] | [Image Library Entry] |
| Title | CRYSTAL STRUCTURE OF THE SR12813-BOUND PXR/RXRALPHA LBD HETE COMPLEX | |
| Keywords | PREGNANE X RECEPTOR, RETINOID X RECEPTOR ALPHA, LIGAND BINDI DOMAIN, NUCLEAR RECEPTOR, SR12813, ALPHA HELICAL SANDWICH, INTERMOLECULAR BETA-SHEET DIMERIZATION, XENOBIOTIC SENSING, UPREGULATION OF DRUG METABOLISM ENZYMES, RETINOIC ACID-BIND PROTEIN | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 4J5X | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | RETINOIC ACID RECEPTOR RXR-ALPHA, NUCLEAR RECEPTO COACTIVATOR 1 | D | 239 | 1898 | 0 |
| 2 | Protein | RETINOIC ACID RECEPTOR RXR-ALPHA, NUCLEAR RECEPTO COACTIVATOR 1 | C | 238 | 1887 | 0 |
| 3 | Protein | NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2, NU RECEPTOR COACTIVATOR 1 | A | 293 | 2389 | 0 |
| 4 | Protein | NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2, NU RECEPTOR COACTIVATOR 1 | B | 293 | 2371 | 0 |
| 5 | Ligand | NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2, NU RECEPTOR COACTIVATOR 1 | A | 1 | 0 | 33 |
| 6 | Ligand | NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2, NU RECEPTOR COACTIVATOR 1 | B | 1 | 0 | 33 |
| 7 | Water | 160 | 0 | 160 | ||
| total | 1225 | 8545 | 226 |
| Unit 1 | GLU228 ASP229 MET230 PRO231 VAL232 GLU233 ARG234 ILE235 LEU236 GLU237 ALA238 GLU239 LEU240 ALA241 VAL242 GLU243 PRO244 LYS245 THR246 GLU247 THR248 TYR249 VAL250 GLU251 ALA252 ASN253 MET254 GLY255 LEU256 ASN257 PRO261 ASN262 ASP263 PRO264 VAL265 THR266 ASN267 ILE268 CYS269 GLN270 ALA271 ALA272 ASP273 LYS274 GLN275 LEU276 PHE277 THR278 LEU279 VAL280 GLU281 TRP282 ALA283 LYS284 ARG285 ILE286 PRO287 HIS288 PHE289 SER290 GLU291 LEU292 PRO293 LEU294 ASP295 ASP296 GLN297 VAL298 ILE299 LEU300 LEU301 ARG302 ALA303 GLY304 TRP305 ASN306 GLU307 LEU308 LEU309 ILE310 ALA311 SER312 PHE313 SER314 HIS315 ARG316 SER317 ILE318 ALA319 VAL320 LYS321 ASP322 GLY323 ILE324 LEU325 LEU326 ALA327 THR328 GLY329 LEU330 HIS331 VAL332 HIS333 ARG334 ASN335 SER336 ALA337 HIS338 SER339 ALA340 GLY341 VAL342 GLY343 ALA344 ILE345 PHE346 ASP347 ARG348 VAL349 LEU350 THR351 GLU352 LEU353 VAL354 SER355 LYS356 MET357 ARG358 ASP359 MET360 GLN361 MET362 ASP363 LYS364 THR365 GLU366 LEU367 GLY368 CYS369 LEU370 ARG371 ALA372 ILE373 VAL374 LEU375 PHE376 ASN377 PRO378 ASP379 SER380 LYS381 GLY382 LEU383 SER384 ASN385 PRO386 ALA387 GLU388 VAL389 GLU390 ALA391 LEU392 ARG393 GLU394 LYS395 VAL396 TYR397 ALA398 SER399 LEU400 GLU401 ALA402 TYR403 CYS404 LYS405 HIS406 LYS407 TYR408 PRO409 GLU410 GLN411 PRO412 GLY413 ARG414 PHE415 ALA416 LYS417 LEU418 LEU419 LEU420 ARG421 LEU422 PRO423 ALA424 LEU425 ARG426 SER427 ILE428 GLY429 LEU430 LYS431 CYS432 LEU433 GLU434 HIS435 LEU436 PHE437 PHE438 PHE439 LYS440 LEU441 ILE442 GLY443 ASP444 THR445 PRO446 ILE447 ASP448 THR449 PHE450 LEU451 MET452 GLU453 MET454 LEU455 GLU456 ALA457 PRO458 ARG476 HIS477 LYS478 ILE479 LEU480 HIS481 ARG482 LEU483 LEU484 GLN485 GLU486 |
| Unit 2 | GLU228 ASP229 MET230 PRO231 VAL232 GLU233 ARG234 ILE235 LEU236 GLU237 ALA238 GLU239 LEU240 ALA241 VAL242 GLU243 PRO244 LYS245 THR246 GLU247 THR248 TYR249 VAL250 GLU251 ALA252 ASN253 MET254 GLY255 LEU256 PRO261 ASN262 ASP263 PRO264 VAL265 THR266 ASN267 ILE268 CYS269 GLN270 ALA271 ALA272 ASP273 LYS274 GLN275 LEU276 PHE277 THR278 LEU279 VAL280 GLU281 TRP282 ALA283 LYS284 ARG285 ILE286 PRO287 HIS288 PHE289 SER290 GLU291 LEU292 PRO293 LEU294 ASP295 ASP296 GLN297 VAL298 ILE299 LEU300 LEU301 ARG302 ALA303 GLY304 TRP305 ASN306 GLU307 LEU308 LEU309 ILE310 ALA311 SER312 PHE313 SER314 HIS315 ARG316 SER317 ILE318 ALA319 VAL320 LYS321 ASP322 GLY323 ILE324 LEU325 LEU326 ALA327 THR328 GLY329 LEU330 HIS331 VAL332 HIS333 ARG334 ASN335 SER336 ALA337 HIS338 SER339 ALA340 GLY341 VAL342 GLY343 ALA344 ILE345 PHE346 ASP347 ARG348 VAL349 LEU350 THR351 GLU352 LEU353 VAL354 SER355 LYS356 MET357 ARG358 ASP359 MET360 GLN361 MET362 ASP363 LYS364 THR365 GLU366 LEU367 GLY368 CYS369 LEU370 ARG371 ALA372 ILE373 VAL374 LEU375 PHE376 ASN377 PRO378 ASP379 SER380 LYS381 GLY382 LEU383 SER384 ASN385 PRO386 ALA387 GLU388 VAL389 GLU390 ALA391 LEU392 ARG393 GLU394 LYS395 VAL396 TYR397 ALA398 SER399 LEU400 GLU401 ALA402 TYR403 CYS404 LYS405 HIS406 LYS407 TYR408 PRO409 GLU410 GLN411 PRO412 GLY413 ARG414 PHE415 ALA416 LYS417 LEU418 LEU419 LEU420 ARG421 LEU422 PRO423 ALA424 LEU425 ARG426 SER427 ILE428 GLY429 LEU430 LYS431 CYS432 LEU433 GLU434 HIS435 LEU436 PHE437 PHE438 PHE439 LYS440 LEU441 ILE442 GLY443 ASP444 THR445 PRO446 ILE447 ASP448 THR449 PHE450 LEU451 MET452 GLU453 MET454 LEU455 GLU456 ALA457 PRO458 ARG476 HIS477 LYS478 ILE479 LEU480 HIS481 ARG482 LEU483 LEU484 GLN485 GLU486 |
| Unit 3 | GLN141 GLY142 LEU143 THR144 GLU145 GLU146 GLN147 ARG148 MET149 MET150 ILE151 ARG152 GLU153 LEU154 MET155 ASP156 ALA157 GLN158 MET159 LYS160 THR161 PHE162 ASP163 THR164 THR165 PHE166 SER167 HIS168 PHE169 LYS170 ASN171 PHE172 ARG173 LEU174 PRO175 GLY176 VAL177 SER192 ARG193 GLU194 GLU195 ALA196 ALA197 LYS198 TRP199 SER200 GLN201 VAL202 ARG203 LYS204 ASP205 LEU206 CYS207 SER208 LEU209 LYS210 VAL211 SER212 LEU213 GLN214 LEU215 ARG216 GLY217 GLU218 ASP219 GLY220 SER221 VAL222 TRP223 ASN224 TYR225 LYS226 PRO227 PRO228 ALA229 ASP230 SER231 GLY232 GLY233 LYS234 GLU235 ILE236 PHE237 SER238 LEU239 LEU240 PRO241 HIS242 MET243 ALA244 ASP245 MET246 SER247 THR248 TYR249 MET250 PHE251 LYS252 GLY253 ILE254 ILE255 SER256 PHE257 ALA258 LYS259 VAL260 ILE261 SER262 TYR263 PHE264 ARG265 ASP266 LEU267 PRO268 ILE269 GLU270 ASP271 GLN272 ILE273 SER274 LEU275 LEU276 LYS277 GLY278 ALA279 ALA280 PHE281 GLU282 LEU283 CYS284 GLN285 LEU286 ARG287 PHE288 ASN289 THR290 VAL291 PHE292 ASN293 ALA294 GLU295 THR296 GLY297 THR298 TRP299 GLU300 CYS301 GLY302 ARG303 LEU304 SER305 TYR306 CYS307 LEU308 GLU309 ASP310 THR311 ALA312 GLY313 GLY314 PHE315 GLN316 GLN317 LEU318 LEU319 LEU320 GLU321 PRO322 MET323 LEU324 LYS325 PHE326 HIS327 TYR328 MET329 LEU330 LYS331 LYS332 LEU333 GLN334 LEU335 HIS336 GLU337 GLU338 GLU339 TYR340 VAL341 LEU342 MET343 GLN344 ALA345 ILE346 SER347 LEU348 PHE349 SER350 PRO351 ASP352 ARG353 PRO354 GLY355 VAL356 LEU357 GLN358 HIS359 ARG360 VAL361 VAL362 ASP363 GLN364 LEU365 GLN366 GLU367 GLN368 PHE369 ALA370 ILE371 THR372 LEU373 LYS374 SER375 TYR376 ILE377 GLU378 CYS379 ASN380 ARG381 PRO382 GLN383 PRO384 ALA385 HIS386 ARG387 PHE388 LEU389 PHE390 LEU391 LYS392 ILE393 MET394 ALA395 MET396 LEU397 THR398 GLU399 LEU400 ARG401 SER402 ILE403 ASN404 ALA405 GLN406 HIS407 THR408 GLN409 ARG410 LEU411 LEU412 ARG413 ILE414 GLN415 ASP416 ILE417 HIS418 PRO419 PHE420 ALA421 THR422 PRO423 LEU424 MET425 GLN426 GLU427 LEU428 PHE429 GLY430 ILE431 THR432 SER444 LEU445 THR446 GLU447 ARG448 HIS449 LYS450 ILE451 LEU452 HIS453 ARG454 LEU455 LEU456 GLN457 GLU458 |
| Unit 4 | GLY139 VAL140 GLN141 GLY142 LEU143 THR144 GLU145 GLU146 GLN147 ARG148 MET149 MET150 ILE151 ARG152 GLU153 LEU154 MET155 ASP156 ALA157 GLN158 MET159 LYS160 THR161 PHE162 ASP163 THR164 THR165 PHE166 SER167 HIS168 PHE169 LYS170 ASN171 PHE172 ARG173 LEU174 PRO175 GLY176 VAL177 SER192 ARG193 GLU194 GLU195 ALA196 ALA197 LYS198 TRP199 SER200 GLN201 VAL202 ARG203 LYS204 ASP205 LEU206 CYS207 SER208 LEU209 LYS210 VAL211 SER212 LEU213 GLN214 LEU215 ARG216 GLY217 GLU218 ASP219 GLY220 SER221 VAL222 TRP223 ASN224 TYR225 LYS226 PRO227 PRO228 ALA229 ASP230 SER231 GLY232 GLY233 LYS234 GLU235 ILE236 PHE237 SER238 LEU239 LEU240 PRO241 HIS242 MET243 ALA244 ASP245 MET246 SER247 THR248 TYR249 MET250 PHE251 LYS252 GLY253 ILE254 ILE255 SER256 PHE257 ALA258 LYS259 VAL260 ILE261 SER262 TYR263 PHE264 ARG265 ASP266 LEU267 PRO268 ILE269 GLU270 ASP271 GLN272 ILE273 SER274 LEU275 LEU276 LYS277 GLY278 ALA279 ALA280 PHE281 GLU282 LEU283 CYS284 GLN285 LEU286 ARG287 PHE288 ASN289 THR290 VAL291 PHE292 ASN293 ALA294 GLU295 THR296 GLY297 THR298 TRP299 GLU300 CYS301 GLY302 ARG303 LEU304 SER305 TYR306 CYS307 LEU308 GLU309 ASP310 THR311 ALA312 GLN317 LEU318 LEU319 LEU320 GLU321 PRO322 MET323 LEU324 LYS325 PHE326 HIS327 TYR328 MET329 LEU330 LYS331 LYS332 LEU333 GLN334 LEU335 HIS336 GLU337 GLU338 GLU339 TYR340 VAL341 LEU342 MET343 GLN344 ALA345 ILE346 SER347 LEU348 PHE349 SER350 PRO351 ASP352 ARG353 PRO354 GLY355 VAL356 LEU357 GLN358 HIS359 ARG360 VAL361 VAL362 ASP363 GLN364 LEU365 GLN366 GLU367 GLN368 PHE369 ALA370 ILE371 THR372 LEU373 LYS374 SER375 TYR376 ILE377 GLU378 CYS379 ASN380 ARG381 PRO382 GLN383 PRO384 ALA385 HIS386 ARG387 PHE388 LEU389 PHE390 LEU391 LYS392 ILE393 MET394 ALA395 MET396 LEU397 THR398 GLU399 LEU400 ARG401 SER402 ILE403 ASN404 ALA405 GLN406 HIS407 THR408 GLN409 ARG410 LEU411 LEU412 ARG413 ILE414 GLN415 ASP416 ILE417 HIS418 PRO419 PHE420 ALA421 THR422 PRO423 LEU424 MET425 GLN426 GLU427 LEU428 PHE429 GLY430 ILE431 SER443 SER444 LEU445 THR446 GLU447 ARG448 HIS449 LYS450 ILE451 LEU452 HIS453 ARG454 LEU455 LEU456 GLN457 GLU458 GLY459 SER460 |
| Unit 5 | SRL501 |
| Unit 6 | SRL501 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |