4J07 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A PROBABLE RIBOFLAVIN SYNTHASE, BETA CH (6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE, DMRL SYNTHASE, LU SYNTHASE) FROM MYCOBACTERIUM LEPRAE
• Keywords: SSGCID, MYCOBACTERIUM LEPRAE, 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE, DMRL SYNTHASE, LUMAZINE SYNTHASE, STRUCTURAL GENO SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4J07	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	A	152	1093	0
2	Protein	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	B	148	1063	0
3	Protein	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	C	149	1074	0
4	Protein	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	D	146	1054	0
5	Protein	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	E	148	1070	0
6	Ligand	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	A	2	0	6
7	Ligand	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	B	2	0	6
8	Ligand	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	C	2	0	6
9	Ligand	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	D	3	0	11
10	Ligand	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	E	2	0	6
11	Water			467	0	467
total				1221	5354	502

Proteins

Unit 1	PRO 8 GLU 9 VAL 10 PRO 11 GLY 12 ILE 13 ASP 14 ALA 15 SER 16 GLY 17 LEU 18 ARG 19 LEU 20 GLY 21 ILE 22 VAL 23 ALA 24 SER 25 THR 26 TRP 27 HIS 28 SER 29 ARG 30 ILE 31 CYS 32 ASP 33 ALA 34 LEU 35 LEU 36 ALA 37 GLY 38 ALA 39 ARG 40 LYS 41 VAL 42 ALA 43 ALA 44 ASP 45 SER 46 GLY 47 ILE 48 ASP 49 GLY 50 PRO 51 THR 52 VAL 53 VAL 54 ARG 55 VAL 56 LEU 57 GLY 58 ALA 59 ILE 60 GLU 61 ILE 62 PRO 63 VAL 64 VAL 65 VAL 66 GLN 67 GLU 68 LEU 69 ALA 70 ARG 71 HIS 72 HIS 73 ASP 74 ALA 75 VAL 76 VAL 77 ALA 78 LEU 79 GLY 80 VAL 81 VAL 82 ILE 83 ARG 84 GLY 85 ASP 86 THR 87 PRO 88 HIS 89 PHE 90 ASP 91 TYR 92 VAL 93 CYS 94 ASN 95 SER 96 VAL 97 THR 98 GLN 99 GLY 100 LEU 101 THR 102 ARG 103 ILE 104 ALA 105 LEU 106 ASP 107 THR 108 SER 109 THR 110 PRO 111 VAL 112 GLY 113 ASN 114 GLY 115 VAL 116 LEU 117 THR 118 THR 119 ASN 120 THR 121 GLU 122 LYS 123 GLN 124 ALA 125 LEU 126 ASP 127 ARG 128 ALA 129 GLY 130 LEU 131 PRO 132 THR 133 SER 134 ALA 135 GLU 136 ASP 137 LYS 138 GLY 139 ALA 140 GLN 141 ALA 142 ALA 143 ALA 144 ALA 145 ALA 146 LEU 147 THR 148 THR 149 ALA 150 LEU 151 THR 152 LEU 153 LEU 154 ASN 155 LEU 156 ARG 157 SER 158 ARG 159
Unit 2	GLY 12 ILE 13 ASP 14 ALA 15 SER 16 GLY 17 LEU 18 ARG 19 LEU 20 GLY 21 ILE 22 VAL 23 ALA 24 SER 25 THR 26 TRP 27 HIS 28 SER 29 ARG 30 ILE 31 CYS 32 ASP 33 ALA 34 LEU 35 LEU 36 ALA 37 GLY 38 ALA 39 ARG 40 LYS 41 VAL 42 ALA 43 ALA 44 ASP 45 SER 46 GLY 47 ILE 48 ASP 49 GLY 50 PRO 51 THR 52 VAL 53 VAL 54 ARG 55 VAL 56 LEU 57 GLY 58 ALA 59 ILE 60 GLU 61 ILE 62 PRO 63 VAL 64 VAL 65 VAL 66 GLN 67 GLU 68 LEU 69 ALA 70 ARG 71 HIS 72 HIS 73 ASP 74 ALA 75 VAL 76 VAL 77 ALA 78 LEU 79 GLY 80 VAL 81 VAL 82 ILE 83 ARG 84 GLY 85 ASP 86 THR 87 PRO 88 HIS 89 PHE 90 ASP 91 TYR 92 VAL 93 CYS 94 ASN 95 SER 96 VAL 97 THR 98 GLN 99 GLY 100 LEU 101 THR 102 ARG 103 ILE 104 ALA 105 LEU 106 ASP 107 THR 108 SER 109 THR 110 PRO 111 VAL 112 GLY 113 ASN 114 GLY 115 VAL 116 LEU 117 THR 118 THR 119 ASN 120 THR 121 GLU 122 LYS 123 GLN 124 ALA 125 LEU 126 ASP 127 ARG 128 ALA 129 GLY 130 LEU 131 PRO 132 THR 133 SER 134 ALA 135 GLU 136 ASP 137 LYS 138 GLY 139 ALA 140 GLN 141 ALA 142 ALA 143 ALA 144 ALA 145 ALA 146 LEU 147 THR 148 THR 149 ALA 150 LEU 151 THR 152 LEU 153 LEU 154 ASN 155 LEU 156 ARG 157 SER 158 ARG 159
Unit 3	GLY 12 ILE 13 ASP 14 ALA 15 SER 16 GLY 17 LEU 18 ARG 19 LEU 20 GLY 21 ILE 22 VAL 23 ALA 24 SER 25 THR 26 TRP 27 HIS 28 SER 29 ARG 30 ILE 31 CYS 32 ASP 33 ALA 34 LEU 35 LEU 36 ALA 37 GLY 38 ALA 39 ARG 40 LYS 41 VAL 42 ALA 43 ALA 44 ASP 45 SER 46 GLY 47 ILE 48 ASP 49 GLY 50 PRO 51 THR 52 VAL 53 VAL 54 ARG 55 VAL 56 LEU 57 GLY 58 ALA 59 ILE 60 GLU 61 ILE 62 PRO 63 VAL 64 VAL 65 VAL 66 GLN 67 GLU 68 LEU 69 ALA 70 ARG 71 HIS 72 HIS 73 ASP 74 ALA 75 VAL 76 VAL 77 ALA 78 LEU 79 GLY 80 VAL 81 VAL 82 ILE 83 ARG 84 GLY 85 ASP 86 THR 87 PRO 88 HIS 89 PHE 90 ASP 91 TYR 92 VAL 93 CYS 94 ASN 95 SER 96 VAL 97 THR 98 GLN 99 GLY 100 LEU 101 THR 102 ARG 103 ILE 104 ALA 105 LEU 106 ASP 107 THR 108 SER 109 THR 110 PRO 111 VAL 112 GLY 113 ASN 114 GLY 115 VAL 116 LEU 117 THR 118 THR 119 ASN 120 THR 121 GLU 122 LYS 123 GLN 124 ALA 125 LEU 126 ASP 127 ARG 128 ALA 129 GLY 130 LEU 131 PRO 132 THR 133 SER 134 ALA 135 GLU 136 ASP 137 LYS 138 GLY 139 ALA 140 GLN 141 ALA 142 ALA 143 ALA 144 ALA 145 ALA 146 LEU 147 THR 148 THR 149 ALA 150 LEU 151 THR 152 LEU 153 LEU 154 ASN 155 LEU 156 ARG 157 SER 158 ARG 159 ILE 160
Unit 4	ILE 13 ASP 14 ALA 15 SER 16 GLY 17 LEU 18 ARG 19 LEU 20 GLY 21 ILE 22 VAL 23 ALA 24 SER 25 THR 26 TRP 27 HIS 28 SER 29 ARG 30 ILE 31 CYS 32 ASP 33 ALA 34 LEU 35 LEU 36 ALA 37 GLY 38 ALA 39 ARG 40 LYS 41 VAL 42 ALA 43 ALA 44 ASP 45 SER 46 GLY 47 ILE 48 ASP 49 GLY 50 PRO 51 THR 52 VAL 53 VAL 54 ARG 55 VAL 56 LEU 57 GLY 58 ALA 59 ILE 60 GLU 61 ILE 62 PRO 63 VAL 64 VAL 65 VAL 66 GLN 67 GLU 68 LEU 69 ALA 70 ARG 71 HIS 72 HIS 73 ASP 74 ALA 75 VAL 76 VAL 77 ALA 78 LEU 79 GLY 80 VAL 81 VAL 82 ILE 83 ARG 84 GLY 85 ASP 86 THR 87 PRO 88 HIS 89 PHE 90 ASP 91 TYR 92 VAL 93 CYS 94 ASN 95 SER 96 VAL 97 THR 98 GLN 99 GLY 100 LEU 101 THR 102 ARG 103 ILE 104 ALA 105 LEU 106 ASP 107 THR 108 SER 109 THR 110 PRO 111 VAL 112 GLY 113 ASN 114 GLY 115 VAL 116 LEU 117 THR 118 THR 119 ASN 120 THR 121 GLU 122 LYS 123 GLN 124 ALA 125 LEU 126 ASP 127 ARG 128 ALA 129 GLY 130 LEU 131 PRO 132 THR 133 SER 134 ALA 135 GLU 136 ASP 137 LYS 138 GLY 139 ALA 140 GLN 141 ALA 142 ALA 143 ALA 144 ALA 145 ALA 146 LEU 147 THR 148 THR 149 ALA 150 LEU 151 THR 152 LEU 153 LEU 154 ASN 155 LEU 156 ARG 157 SER 158
Unit 5	ILE 13 ASP 14 ALA 15 SER 16 GLY 17 LEU 18 ARG 19 LEU 20 GLY 21 ILE 22 VAL 23 ALA 24 SER 25 THR 26 TRP 27 HIS 28 SER 29 ARG 30 ILE 31 CYS 32 ASP 33 ALA 34 LEU 35 LEU 36 ALA 37 GLY 38 ALA 39 ARG 40 LYS 41 VAL 42 ALA 43 ALA 44 ASP 45 SER 46 GLY 47 ILE 48 ASP 49 GLY 50 PRO 51 THR 52 VAL 53 VAL 54 ARG 55 VAL 56 LEU 57 GLY 58 ALA 59 ILE 60 GLU 61 ILE 62 PRO 63 VAL 64 VAL 65 VAL 66 GLN 67 GLU 68 LEU 69 ALA 70 ARG 71 HIS 72 HIS 73 ASP 74 ALA 75 VAL 76 VAL 77 ALA 78 LEU 79 GLY 80 VAL 81 VAL 82 ILE 83 ARG 84 GLY 85 ASP 86 THR 87 PRO 88 HIS 89 PHE 90 ASP 91 TYR 92 VAL 93 CYS 94 ASN 95 SER 96 VAL 97 THR 98 GLN 99 GLY 100 LEU 101 THR 102 ARG 103 ILE 104 ALA 105 LEU 106 ASP 107 THR 108 SER 109 THR 110 PRO 111 VAL 112 GLY 113 ASN 114 GLY 115 VAL 116 LEU 117 THR 118 THR 119 ASN 120 THR 121 GLU 122 LYS 123 GLN 124 ALA 125 LEU 126 ASP 127 ARG 128 ALA 129 GLY 130 LEU 131 PRO 132 THR 133 SER 134 ALA 135 GLU 136 ASP 137 LYS 138 GLY 139 ALA 140 GLN 141 ALA 142 ALA 143 ALA 144 ALA 145 ALA 146 LEU 147 THR 148 THR 149 ALA 150 LEU 151 THR 152 LEU 153 LEU 154 ASN 155 LEU 156 ARG 157 SER 158 ARG 159 ILE 160

Ligands

Unit 6	NA 201 SO4 202
Unit 7	NA 201 SO4 202
Unit 8	NA 201 SO4 202
Unit 9	SO4 201 SO4 202 NA 203
Unit 10	SO4 201 NA 202