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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF HUMAN BETA1, 4GALACTOSYLTRANSFERASE 7 IN CLOSED CONFORMATION IN COMPLEX MANGANESE AND UDP
Keywords GT-A FOLD, CLOSED CONFORMATION, MANGANESE AND UDP COMPLEX, GLYCOSYLTRANSFERASE, GOLGI, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4IRQ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-1,4-GALACTOSYLTRANSFERASE 7  A 246 2032 0
2  Protein   BETA-1,4-GALACTOSYLTRANSFERASE 7  B 240 1973 0
3  Protein   BETA-1,4-GALACTOSYLTRANSFERASE 7  C 249 2055 0
4  Protein   BETA-1,4-GALACTOSYLTRANSFERASE 7  D 243 1999 0
5  Ligand   BETA-1,4-GALACTOSYLTRANSFERASE 7  A 3 0 34
6  Ligand   BETA-1,4-GALACTOSYLTRANSFERASE 7  B 3 0 34
7  Ligand   BETA-1,4-GALACTOSYLTRANSFERASE 7  C 3 0 34
8  Ligand   BETA-1,4-GALACTOSYLTRANSFERASE 7  D 3 0 34
9 Water     289 0 289
total       1279 8059 425

Proteins
Unit 1 GLU82 HIS83 TRP84 GLU85 GLU86 ASP87 ALA88 SER89 TRP90 GLY91 PRO92 HIS93 ARG94 LEU95 ALA96 VAL97 LEU98 VAL99 PRO100 PHE101 ARG102 GLU103 ARG104 PHE105 GLU106 GLU107 LEU108 LEU109 VAL110 PHE111 VAL112 PRO113 HIS114 MET115 ARG116 ARG117 PHE118 LEU119 SER120 ARG121 LYS122 LYS123 ILE124 ARG125 HIS126 HIS127 ILE128 TYR129 VAL130 LEU131 ASN132 GLN133 VAL134 ASP135 HIS136 PHE137 ARG138 PHE139 ASN140 ARG141 ALA142 ALA143 LEU144 ILE145 ASN146 VAL147 GLY148 PHE149 LEU150 GLU151 SER152 SER153 ASN154 SER155 THR156 ASP157 TYR158 ILE159 ALA160 MET161 HIS162 ASP163 VAL164 ASP165 LEU166 LEU167 PRO168 LEU169 ASN170 GLU171 GLU172 LEU173 ASP174 TYR175 GLY176 PHE177 PRO178 GLU179 ALA180 GLY181 PRO182 PHE183 HIS184 VAL185 ALA186 SER187 PRO188 GLU189 LEU190 HIS191 PRO192 LEU193 TYR194 HIS195 TYR196 LYS197 THR198 TYR199 VAL200 GLY201 GLY202 ILE203 LEU204 LEU205 LEU206 SER207 LYS208 GLN209 HIS210 TYR211 ARG212 LEU213 CYS214 ASN215 GLY216 MET217 SER218 ASN219 ARG220 PHE221 TRP222 GLY223 TRP224 GLY225 ARG226 GLU227 ASP228 ASP229 GLU230 PHE231 TYR232 ARG233 ARG234 ILE235 LYS236 GLY237 ALA238 GLY239 LEU240 GLN241 LEU242 PHE243 ARG244 PRO245 SER246 GLY247 ILE248 THR249 THR250 GLY251 TYR252 LYS253 THR254 PHE255 ARG256 HIS257 LEU258 HIS259 ASP260 PRO261 ALA262 TRP263 ARG264 LYS265 ARG266 ASP267 GLN268 LYS269 ARG270 ILE271 ALA272 ALA273 GLN274 LYS275 GLN276 GLU277 GLN278 PHE279 LYS280 VAL281 ASP282 ARG283 GLU284 GLY285 GLY286 LEU287 ASN288 THR289 VAL290 LYS291 TYR292 HIS293 VAL294 ALA295 SER296 ARG297 THR298 ALA299 LEU300 SER301 VAL302 GLY303 GLY304 ALA305 PRO306 CYS307 THR308 VAL309 LEU310 ASN311 ILE312 MET313 LEU314 ASP315 CYS316 ASP317 LYS318 THR319 ALA320 THR321 PRO322 TRP323 CYS324 THR325 PHE326 SER327
Unit 2 ALA88 SER89 TRP90 GLY91 PRO92 HIS93 ARG94 LEU95 ALA96 VAL97 LEU98 VAL99 PRO100 PHE101 ARG102 GLU103 ARG104 PHE105 GLU106 GLU107 LEU108 LEU109 VAL110 PHE111 VAL112 PRO113 HIS114 MET115 ARG116 ARG117 PHE118 LEU119 SER120 ARG121 LYS122 LYS123 ILE124 ARG125 HIS126 HIS127 ILE128 TYR129 VAL130 LEU131 ASN132 GLN133 VAL134 ASP135 HIS136 PHE137 ARG138 PHE139 ASN140 ARG141 ALA142 ALA143 LEU144 ILE145 ASN146 VAL147 GLY148 PHE149 LEU150 GLU151 SER152 SER153 ASN154 SER155 THR156 ASP157 TYR158 ILE159 ALA160 MET161 HIS162 ASP163 VAL164 ASP165 LEU166 LEU167 PRO168 LEU169 ASN170 GLU171 GLU172 LEU173 ASP174 TYR175 GLY176 PHE177 PRO178 GLU179 ALA180 GLY181 PRO182 PHE183 HIS184 VAL185 ALA186 SER187 PRO188 GLU189 LEU190 HIS191 PRO192 LEU193 TYR194 HIS195 TYR196 LYS197 THR198 TYR199 VAL200 GLY201 GLY202 ILE203 LEU204 LEU205 LEU206 SER207 LYS208 GLN209 HIS210 TYR211 ARG212 LEU213 CYS214 ASN215 GLY216 MET217 SER218 ASN219 ARG220 PHE221 TRP222 GLY223 TRP224 GLY225 ARG226 GLU227 ASP228 ASP229 GLU230 PHE231 TYR232 ARG233 ARG234 ILE235 LYS236 GLY237 ALA238 GLY239 LEU240 GLN241 LEU242 PHE243 ARG244 PRO245 SER246 GLY247 ILE248 THR249 THR250 GLY251 TYR252 LYS253 THR254 PHE255 ARG256 HIS257 LEU258 HIS259 ASP260 PRO261 ALA262 TRP263 ARG264 LYS265 ARG266 ASP267 GLN268 LYS269 ARG270 ILE271 ALA272 ALA273 GLN274 LYS275 GLN276 GLU277 GLN278 PHE279 LYS280 VAL281 ASP282 ARG283 GLU284 GLY285 GLY286 LEU287 ASN288 THR289 VAL290 LYS291 TYR292 HIS293 VAL294 ALA295 SER296 ARG297 THR298 ALA299 LEU300 SER301 VAL302 GLY303 GLY304 ALA305 PRO306 CYS307 THR308 VAL309 LEU310 ASN311 ILE312 MET313 LEU314 ASP315 CYS316 ASP317 LYS318 THR319 ALA320 THR321 PRO322 TRP323 CYS324 THR325 PHE326 SER327
Unit 3 ASP79 ILE80 PRO81 GLU82 HIS83 TRP84 GLU85 GLU86 ASP87 ALA88 SER89 TRP90 GLY91 PRO92 HIS93 ARG94 LEU95 ALA96 VAL97 LEU98 VAL99 PRO100 PHE101 ARG102 GLU103 ARG104 PHE105 GLU106 GLU107 LEU108 LEU109 VAL110 PHE111 VAL112 PRO113 HIS114 MET115 ARG116 ARG117 PHE118 LEU119 SER120 ARG121 LYS122 LYS123 ILE124 ARG125 HIS126 HIS127 ILE128 TYR129 VAL130 LEU131 ASN132 GLN133 VAL134 ASP135 HIS136 PHE137 ARG138 PHE139 ASN140 ARG141 ALA142 ALA143 LEU144 ILE145 ASN146 VAL147 GLY148 PHE149 LEU150 GLU151 SER152 SER153 ASN154 SER155 THR156 ASP157 TYR158 ILE159 ALA160 MET161 HIS162 ASP163 VAL164 ASP165 LEU166 LEU167 PRO168 LEU169 ASN170 GLU171 GLU172 LEU173 ASP174 TYR175 GLY176 PHE177 PRO178 GLU179 ALA180 GLY181 PRO182 PHE183 HIS184 VAL185 ALA186 SER187 PRO188 GLU189 LEU190 HIS191 PRO192 LEU193 TYR194 HIS195 TYR196 LYS197 THR198 TYR199 VAL200 GLY201 GLY202 ILE203 LEU204 LEU205 LEU206 SER207 LYS208 GLN209 HIS210 TYR211 ARG212 LEU213 CYS214 ASN215 GLY216 MET217 SER218 ASN219 ARG220 PHE221 TRP222 GLY223 TRP224 GLY225 ARG226 GLU227 ASP228 ASP229 GLU230 PHE231 TYR232 ARG233 ARG234 ILE235 LYS236 GLY237 ALA238 GLY239 LEU240 GLN241 LEU242 PHE243 ARG244 PRO245 SER246 GLY247 ILE248 THR249 THR250 GLY251 TYR252 LYS253 THR254 PHE255 ARG256 HIS257 LEU258 HIS259 ASP260 PRO261 ALA262 TRP263 ARG264 LYS265 ARG266 ASP267 GLN268 LYS269 ARG270 ILE271 ALA272 ALA273 GLN274 LYS275 GLN276 GLU277 GLN278 PHE279 LYS280 VAL281 ASP282 ARG283 GLU284 GLY285 GLY286 LEU287 ASN288 THR289 VAL290 LYS291 TYR292 HIS293 VAL294 ALA295 SER296 ARG297 THR298 ALA299 LEU300 SER301 VAL302 GLY303 GLY304 ALA305 PRO306 CYS307 THR308 VAL309 LEU310 ASN311 ILE312 MET313 LEU314 ASP315 CYS316 ASP317 LYS318 THR319 ALA320 THR321 PRO322 TRP323 CYS324 THR325 PHE326 SER327
Unit 4 GLU85 GLU86 ASP87 ALA88 SER89 TRP90 GLY91 PRO92 HIS93 ARG94 LEU95 ALA96 VAL97 LEU98 VAL99 PRO100 PHE101 ARG102 GLU103 ARG104 PHE105 GLU106 GLU107 LEU108 LEU109 VAL110 PHE111 VAL112 PRO113 HIS114 MET115 ARG116 ARG117 PHE118 LEU119 SER120 ARG121 LYS122 LYS123 ILE124 ARG125 HIS126 HIS127 ILE128 TYR129 VAL130 LEU131 ASN132 GLN133 VAL134 ASP135 HIS136 PHE137 ARG138 PHE139 ASN140 ARG141 ALA142 ALA143 LEU144 ILE145 ASN146 VAL147 GLY148 PHE149 LEU150 GLU151 SER152 SER153 ASN154 SER155 THR156 ASP157 TYR158 ILE159 ALA160 MET161 HIS162 ASP163 VAL164 ASP165 LEU166 LEU167 PRO168 LEU169 ASN170 GLU171 GLU172 LEU173 ASP174 TYR175 GLY176 PHE177 PRO178 GLU179 ALA180 GLY181 PRO182 PHE183 HIS184 VAL185 ALA186 SER187 PRO188 GLU189 LEU190 HIS191 PRO192 LEU193 TYR194 HIS195 TYR196 LYS197 THR198 TYR199 VAL200 GLY201 GLY202 ILE203 LEU204 LEU205 LEU206 SER207 LYS208 GLN209 HIS210 TYR211 ARG212 LEU213 CYS214 ASN215 GLY216 MET217 SER218 ASN219 ARG220 PHE221 TRP222 GLY223 TRP224 GLY225 ARG226 GLU227 ASP228 ASP229 GLU230 PHE231 TYR232 ARG233 ARG234 ILE235 LYS236 GLY237 ALA238 GLY239 LEU240 GLN241 LEU242 PHE243 ARG244 PRO245 SER246 GLY247 ILE248 THR249 THR250 GLY251 TYR252 LYS253 THR254 PHE255 ARG256 HIS257 LEU258 HIS259 ASP260 PRO261 ALA262 TRP263 ARG264 LYS265 ARG266 ASP267 GLN268 LYS269 ARG270 ILE271 ALA272 ALA273 GLN274 LYS275 GLN276 GLU277 GLN278 PHE279 LYS280 VAL281 ASP282 ARG283 GLU284 GLY285 GLY286 LEU287 ASN288 THR289 VAL290 LYS291 TYR292 HIS293 VAL294 ALA295 SER296 ARG297 THR298 ALA299 LEU300 SER301 VAL302 GLY303 GLY304 ALA305 PRO306 CYS307 THR308 VAL309 LEU310 ASN311 ILE312 MET313 LEU314 ASP315 CYS316 ASP317 LYS318 THR319 ALA320 THR321 PRO322 TRP323 CYS324 THR325 PHE326 SER327

Ligands
Unit 5 MN401 UDP402 TRS403
Unit 6 MN401 UDP402 TRS403
Unit 7 MN401 UDP402 TRS403
Unit 8 MN401 UDP402 TRS403

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany