4IRK - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF POLYMERASE-DNA COMPLEX, DNA
• Keywords: DNA POLYMERASE, Y-FAMILY, TRANSFERASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4IRK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA POLYMERASE IV	B	342	2688	0
2	Other macromolecule		C	18	364	0
3	DNA		G	14	265	18
4	Protein	DNA POLYMERASE IV	A	342	2688	0
5	Other macromolecule		F	18	364	0
6	DNA		H	14	265	18
7	Ligand	DNA POLYMERASE IV	B	2	0	29
8	Ligand	DNA POLYMERASE IV	A	2	0	29
9	Water			324	0	324
total				1076	6634	418

Proteins

Unit 1

GLY 0 SER 1 ARG 2 LYS 3 ILE 4 ILE 5 HIS 6 VAL 7 ASP 8 MET 9 ASP 10 CYS 11 PHE 12 PHE 13 ALA 14 ALA 15 VAL 16 GLU 17 MET 18 ARG 19 ASP 20 ASN 21 PRO 22 ALA 23 LEU 24 ARG 25 ASP 26 ILE 27 PRO 28 ILE 29 ALA 30 ILE 31 GLY 32 GLY 33 SER 34 ARG 35 GLU 36 ARG 37 ARG 38 GLY 39 VAL 40 ILE 41 SER 42 THR 43 ALA 44 ASN 45 TYR 46 PRO 47 ALA 48 ARG 49 LYS 50 PHE 51 GLY 52 VAL 53 ARG 54 SER 55 ALA 56 MET 57 PRO 58 THR 59 GLY 60 MET 61 ALA 62 LEU 63 ALA 64 LEU 65 CYS 66 PRO 67 HIS 68 LEU 69 THR 70 LEU 71 LEU 72 PRO 73 GLY 74 ARG 75 PHE 76 ASP 77 ALA 78 TYR 79 LYS 80 GLU 81 ALA 82 SER 83 ASN 84 HIS 85 ILE 86 ARG 87 GLU 88 ILE 89 PHE 90 SER 91 ARG 92 TYR 93 THR 94 SER 95 ARG 96 ILE 97 GLU 98 PRO 99 LEU 100 SER 101 LEU 102 ASP 103 GLU 104 ALA 105 TYR 106 LEU 107 ASP 108 VAL 109 THR 110 ASP 111 SER 112 VAL 113 HIS 114 CYS 115 HIS 116 GLY 117 SER 118 ALA 119 THR 120 LEU 121 ILE 122 ALA 123 GLN 124 GLU 125 ILE 126 ARG 127 GLN 128 THR 129 ILE 130 PHE 131 ASN 132 GLU 133 LEU 134 GLN 135 LEU 136 THR 137 ALA 138 SER 139 ALA 140 GLY 141 VAL 142 ALA 143 PRO 144 VAL 145 LYS 146 PHE 147 LEU 148 ALA 149 LYS 150 ILE 151 ALA 152 SER 153 ASP 154 MET 155 ASN 156 LYS 157 PRO 158 ASN 159 GLY 160 GLN 161 PHE 162 VAL 163 ILE 164 THR 165 PRO 166 ALA 167 GLU 168 VAL 169 PRO 170 ALA 171 PHE 172 LEU 173 GLN 174 THR 175 LEU 176 PRO 177 LEU 178 ALA 179 LYS 180 ILE 181 PRO 182 GLY 183 VAL 184 GLY 185 LYS 186 VAL 187 SER 188 ALA 189 ALA 190 LYS 191 LEU 192 GLU 193 ALA 194 MET 195 GLY 196 LEU 197 ARG 198 THR 199 CYS 200 GLY 201 ASP 202 VAL 203 GLN 204 ALA 205 CYS 206 ASP 207 LEU 208 VAL 209 MET 210 LEU 211 LEU 212 LYS 213 ARG 214 PHE 215 GLY 216 LYS 217 PHE 218 GLY 219 ARG 220 ILE 221 LEU 222 TRP 223 GLU 224 ARG 225 SER 226 GLN 227 GLY 228 ILE 229 ASP 230 GLU 231 ARG 232 ASP 233 VAL 234 ASN 235 SER 236 GLU 237 ARG 238 LEU 239 ARG 240 LYS 241 SER 242 VAL 243 GLY 244 VAL 245 GLU 246 ARG 247 THR 248 MET 249 ALA 250 GLU 251 ASP 252 ILE 253 HIS 254 HIS 255 TRP 256 SER 257 GLU 258 CYS 259 GLU 260 ALA 261 ILE 262 ILE 263 GLU 264 ARG 265 LEU 266 TYR 267 PRO 268 GLU 269 LEU 270 GLU 271 ARG 272 ARG 273 LEU 274 ALA 275 LYS 276 VAL 277 LYS 278 PRO 279 ASP 280 LEU 281 LEU 282 ILE 283 ALA 284 ARG 285 GLN 286 GLY 287 VAL 288 LYS 289 LEU 290 LYS 291 PHE 292 ASP 293 ASP 294 PHE 295 GLN 296 GLN 297 THR 298 THR 299 GLN 300 GLU 301 HIS 302 VAL 303 TRP 304 PRO 305 ARG 306 LEU 307 ASN 308 LYS 309 ALA 310 ASP 311 LEU 312 ILE 313 ALA 314 THR 315 ALA 316 ARG 317 LYS 318 THR 319 TRP 320 ASP 321 GLU 322 ARG 323 ARG 324 GLY 325 GLY 326 ARG 327 GLY 328 VAL 329 ARG 330 LEU 331 VAL 332 GLY 333 LEU 334 HIS 335 VAL 336 THR 337 LEU 338 LEU 339 ASP 340 PRO 341

Unit 4

GLY 0 SER 1 ARG 2 LYS 3 ILE 4 ILE 5 HIS 6 VAL 7 ASP 8 MET 9 ASP 10 CYS 11 PHE 12 PHE 13 ALA 14 ALA 15 VAL 16 GLU 17 MET 18 ARG 19 ASP 20 ASN 21 PRO 22 ALA 23 LEU 24 ARG 25 ASP 26 ILE 27 PRO 28 ILE 29 ALA 30 ILE 31 GLY 32 GLY 33 SER 34 ARG 35 GLU 36 ARG 37 ARG 38 GLY 39 VAL 40 ILE 41 SER 42 THR 43 ALA 44 ASN 45 TYR 46 PRO 47 ALA 48 ARG 49 LYS 50 PHE 51 GLY 52 VAL 53 ARG 54 SER 55 ALA 56 MET 57 PRO 58 THR 59 GLY 60 MET 61 ALA 62 LEU 63 ALA 64 LEU 65 CYS 66 PRO 67 HIS 68 LEU 69 THR 70 LEU 71 LEU 72 PRO 73 GLY 74 ARG 75 PHE 76 ASP 77 ALA 78 TYR 79 LYS 80 GLU 81 ALA 82 SER 83 ASN 84 HIS 85 ILE 86 ARG 87 GLU 88 ILE 89 PHE 90 SER 91 ARG 92 TYR 93 THR 94 SER 95 ARG 96 ILE 97 GLU 98 PRO 99 LEU 100 SER 101 LEU 102 ASP 103 GLU 104 ALA 105 TYR 106 LEU 107 ASP 108 VAL 109 THR 110 ASP 111 SER 112 VAL 113 HIS 114 CYS 115 HIS 116 GLY 117 SER 118 ALA 119 THR 120 LEU 121 ILE 122 ALA 123 GLN 124 GLU 125 ILE 126 ARG 127 GLN 128 THR 129 ILE 130 PHE 131 ASN 132 GLU 133 LEU 134 GLN 135 LEU 136 THR 137 ALA 138 SER 139 ALA 140 GLY 141 VAL 142 ALA 143 PRO 144 VAL 145 LYS 146 PHE 147 LEU 148 ALA 149 LYS 150 ILE 151 ALA 152 SER 153 ASP 154 MET 155 ASN 156 LYS 157 PRO 158 ASN 159 GLY 160 GLN 161 PHE 162 VAL 163 ILE 164 THR 165 PRO 166 ALA 167 GLU 168 VAL 169 PRO 170 ALA 171 PHE 172 LEU 173 GLN 174 THR 175 LEU 176 PRO 177 LEU 178 ALA 179 LYS 180 ILE 181 PRO 182 GLY 183 VAL 184 GLY 185 LYS 186 VAL 187 SER 188 ALA 189 ALA 190 LYS 191 LEU 192 GLU 193 ALA 194 MET 195 GLY 196 LEU 197 ARG 198 THR 199 CYS 200 GLY 201 ASP 202 VAL 203 GLN 204 ALA 205 CYS 206 ASP 207 LEU 208 VAL 209 MET 210 LEU 211 LEU 212 LYS 213 ARG 214 PHE 215 GLY 216 LYS 217 PHE 218 GLY 219 ARG 220 ILE 221 LEU 222 TRP 223 GLU 224 ARG 225 SER 226 GLN 227 GLY 228 ILE 229 ASP 230 GLU 231 ARG 232 ASP 233 VAL 234 ASN 235 SER 236 GLU 237 ARG 238 LEU 239 ARG 240 LYS 241 SER 242 VAL 243 GLY 244 VAL 245 GLU 246 ARG 247 THR 248 MET 249 ALA 250 GLU 251 ASP 252 ILE 253 HIS 254 HIS 255 TRP 256 SER 257 GLU 258 CYS 259 GLU 260 ALA 261 ILE 262 ILE 263 GLU 264 ARG 265 LEU 266 TYR 267 PRO 268 GLU 269 LEU 270 GLU 271 ARG 272 ARG 273 LEU 274 ALA 275 LYS 276 VAL 277 LYS 278 PRO 279 ASP 280 LEU 281 LEU 282 ILE 283 ALA 284 ARG 285 GLN 286 GLY 287 VAL 288 LYS 289 LEU 290 LYS 291 PHE 292 ASP 293 ASP 294 PHE 295 GLN 296 GLN 297 THR 298 THR 299 GLN 300 GLU 301 HIS 302 VAL 303 TRP 304 PRO 305 ARG 306 LEU 307 ASN 308 LYS 309 ALA 310 ASP 311 LEU 312 ILE 313 ALA 314 THR 315 ALA 316 ARG 317 LYS 318 THR 319 TRP 320 ASP 321 GLU 322 ARG 323 ARG 324 GLY 325 GLY 326 ARG 327 GLY 328 VAL 329 ARG 330 LEU 331 VAL 332 GLY 333 LEU 334 HIS 335 VAL 336 THR 337 LEU 338 LEU 339 ASP 340 PRO 341

Nucleic acids

Unit 3	DG 860 DG 861 DG 862 DT 863 DC 864 DC 865 DT 866 DA 867 DG 868 DG 869 DA 870 DC 871 DC 872 DOC 873
Unit 6	DG 860 DG 861 DG 862 DT 863 DC 864 DC 865 DT 866 DA 867 DG 868 DG 869 DA 870 DC 871 DC 872 DOC 873

Other macromolecules

Unit 2	DT 837 DC 838 DT 839 DA 840 DG 841 DG 842 DG 843 DT 844 DC 845 DC 846 DT 847 DA 848 DG 849 DG 850 DA 851 DC 852 DC 853 DC 854
Unit 5	DT 837 DC 838 DT 839 DA 840 DG 841 DG 842 DG 843 DT 844 DC 845 DC 846 DT 847 DA 848 DG 849 DG 850 DA 851 DC 852 DC 853 DC 854

Ligands

Unit 7	DCP 401 MG 402
Unit 8	DCP 401 MG 402