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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PASTEURELLA MULTOCIDA N-ACETYL-D-NEURAM LYASE
Keywords TIM BARREL, SCHIFF BASE, LYASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4IMC     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   N-ACETYLNEURAMINATE LYASE  A 292 2291 0
2  Protein   N-ACETYLNEURAMINATE LYASE  B 292 2291 0
3  Protein   N-ACETYLNEURAMINATE LYASE  C 292 2291 0
4  Protein   N-ACETYLNEURAMINATE LYASE  D 292 2291 0
5  Ligand   N-ACETYLNEURAMINATE LYASE  A 6 0 26
6  Ligand   N-ACETYLNEURAMINATE LYASE  B 6 0 26
7  Ligand   N-ACETYLNEURAMINATE LYASE  C 5 0 21
8  Ligand   N-ACETYLNEURAMINATE LYASE  D 4 0 18
9 Water     1206 0 1206
total       2395 9164 1297

Proteins
Unit 1 LYS2 ASN3 LEU4 LYS5 GLY6 ILE7 PHE8 SER9 ALA10 LEU11 LEU12 VAL13 SER14 PHE15 ASN16 ALA17 ASP18 GLY19 SER20 ILE21 ASN22 GLU23 LYS24 GLY25 LEU26 ARG27 GLN28 ILE29 VAL30 ARG31 TYR32 ASN33 ILE34 ASP35 LYS36 MET37 LYS38 VAL39 ASP40 GLY41 LEU42 TYR43 VAL44 GLY45 GLY46 SER47 THR48 GLY49 GLU50 ASN51 PHE52 MET53 LEU54 SER55 THR56 GLU57 GLU58 LYS59 LYS60 GLU61 ILE62 PHE63 ARG64 ILE65 ALA66 LYS67 ASP68 GLU69 ALA70 LYS71 ASP72 GLU73 ILE74 ALA75 LEU76 ILE77 ALA78 GLN79 VAL80 GLY81 SER82 VAL83 ASN84 LEU85 GLN86 GLU87 ALA88 ILE89 GLU90 LEU91 GLY92 LYS93 TYR94 ALA95 THR96 GLU97 LEU98 GLY99 TYR100 ASP101 SER102 LEU103 SER104 ALA105 VAL106 THR107 PRO108 PHE109 TYR110 TYR111 LYS112 PHE113 SER114 PHE115 PRO116 GLU117 ILE118 LYS119 HIS120 TYR121 TYR122 ASP123 SER124 ILE125 ILE126 GLU127 ALA128 THR129 GLY130 ASN131 TYR132 MET133 ILE134 VAL135 TYR136 SER137 ILE138 PRO139 PHE140 LEU141 THR142 GLY143 VAL144 ASN145 ILE146 GLY147 VAL148 GLU149 GLN150 PHE151 GLY152 GLU153 LEU154 TYR155 LYS156 ASN157 PRO158 LYS159 VAL160 LEU161 GLY162 VAL163 LYS164 PHE165 THR166 ALA167 GLY168 ASP169 PHE170 TYR171 LEU172 LEU173 GLU174 ARG175 LEU176 LYS177 LYS178 ALA179 TYR180 PRO181 ASN182 HIS183 LEU184 ILE185 TRP186 ALA187 GLY188 PHE189 ASP190 GLU191 MET192 MET193 LEU194 PRO195 ALA196 ALA197 SER198 LEU199 GLY200 VAL201 ASP202 GLY203 ALA204 ILE205 GLY206 SER207 THR208 PHE209 ASN210 VAL211 ASN212 GLY213 VAL214 ARG215 ALA216 ARG217 GLN218 ILE219 PHE220 GLU221 LEU222 THR223 GLN224 ALA225 GLY226 LYS227 LEU228 LYS229 GLU230 ALA231 LEU232 GLU233 ILE234 GLN235 HIS236 VAL237 THR238 ASN239 ASP240 LEU241 ILE242 GLU243 GLY244 ILE245 LEU246 ALA247 ASN248 GLY249 LEU250 TYR251 LEU252 THR253 ILE254 LYS255 GLU256 LEU257 LEU258 LYS259 LEU260 ASP261 GLY262 VAL263 GLU264 ALA265 GLY266 TYR267 CYS268 ARG269 GLU270 PRO271 MET272 THR273 LYS274 GLU275 LEU276 SER277 SER278 GLU279 LYS280 VAL281 ALA282 PHE283 ALA284 LYS285 GLU286 LEU287 LYS288 ALA289 LYS290 TYR291 LEU292 SER293
Unit 2 LYS2 ASN3 LEU4 LYS5 GLY6 ILE7 PHE8 SER9 ALA10 LEU11 LEU12 VAL13 SER14 PHE15 ASN16 ALA17 ASP18 GLY19 SER20 ILE21 ASN22 GLU23 LYS24 GLY25 LEU26 ARG27 GLN28 ILE29 VAL30 ARG31 TYR32 ASN33 ILE34 ASP35 LYS36 MET37 LYS38 VAL39 ASP40 GLY41 LEU42 TYR43 VAL44 GLY45 GLY46 SER47 THR48 GLY49 GLU50 ASN51 PHE52 MET53 LEU54 SER55 THR56 GLU57 GLU58 LYS59 LYS60 GLU61 ILE62 PHE63 ARG64 ILE65 ALA66 LYS67 ASP68 GLU69 ALA70 LYS71 ASP72 GLU73 ILE74 ALA75 LEU76 ILE77 ALA78 GLN79 VAL80 GLY81 SER82 VAL83 ASN84 LEU85 GLN86 GLU87 ALA88 ILE89 GLU90 LEU91 GLY92 LYS93 TYR94 ALA95 THR96 GLU97 LEU98 GLY99 TYR100 ASP101 SER102 LEU103 SER104 ALA105 VAL106 THR107 PRO108 PHE109 TYR110 TYR111 LYS112 PHE113 SER114 PHE115 PRO116 GLU117 ILE118 LYS119 HIS120 TYR121 TYR122 ASP123 SER124 ILE125 ILE126 GLU127 ALA128 THR129 GLY130 ASN131 TYR132 MET133 ILE134 VAL135 TYR136 SER137 ILE138 PRO139 PHE140 LEU141 THR142 GLY143 VAL144 ASN145 ILE146 GLY147 VAL148 GLU149 GLN150 PHE151 GLY152 GLU153 LEU154 TYR155 LYS156 ASN157 PRO158 LYS159 VAL160 LEU161 GLY162 VAL163 LYS164 PHE165 THR166 ALA167 GLY168 ASP169 PHE170 TYR171 LEU172 LEU173 GLU174 ARG175 LEU176 LYS177 LYS178 ALA179 TYR180 PRO181 ASN182 HIS183 LEU184 ILE185 TRP186 ALA187 GLY188 PHE189 ASP190 GLU191 MET192 MET193 LEU194 PRO195 ALA196 ALA197 SER198 LEU199 GLY200 VAL201 ASP202 GLY203 ALA204 ILE205 GLY206 SER207 THR208 PHE209 ASN210 VAL211 ASN212 GLY213 VAL214 ARG215 ALA216 ARG217 GLN218 ILE219 PHE220 GLU221 LEU222 THR223 GLN224 ALA225 GLY226 LYS227 LEU228 LYS229 GLU230 ALA231 LEU232 GLU233 ILE234 GLN235 HIS236 VAL237 THR238 ASN239 ASP240 LEU241 ILE242 GLU243 GLY244 ILE245 LEU246 ALA247 ASN248 GLY249 LEU250 TYR251 LEU252 THR253 ILE254 LYS255 GLU256 LEU257 LEU258 LYS259 LEU260 ASP261 GLY262 VAL263 GLU264 ALA265 GLY266 TYR267 CYS268 ARG269 GLU270 PRO271 MET272 THR273 LYS274 GLU275 LEU276 SER277 SER278 GLU279 LYS280 VAL281 ALA282 PHE283 ALA284 LYS285 GLU286 LEU287 LYS288 ALA289 LYS290 TYR291 LEU292 SER293
Unit 3 LYS2 ASN3 LEU4 LYS5 GLY6 ILE7 PHE8 SER9 ALA10 LEU11 LEU12 VAL13 SER14 PHE15 ASN16 ALA17 ASP18 GLY19 SER20 ILE21 ASN22 GLU23 LYS24 GLY25 LEU26 ARG27 GLN28 ILE29 VAL30 ARG31 TYR32 ASN33 ILE34 ASP35 LYS36 MET37 LYS38 VAL39 ASP40 GLY41 LEU42 TYR43 VAL44 GLY45 GLY46 SER47 THR48 GLY49 GLU50 ASN51 PHE52 MET53 LEU54 SER55 THR56 GLU57 GLU58 LYS59 LYS60 GLU61 ILE62 PHE63 ARG64 ILE65 ALA66 LYS67 ASP68 GLU69 ALA70 LYS71 ASP72 GLU73 ILE74 ALA75 LEU76 ILE77 ALA78 GLN79 VAL80 GLY81 SER82 VAL83 ASN84 LEU85 GLN86 GLU87 ALA88 ILE89 GLU90 LEU91 GLY92 LYS93 TYR94 ALA95 THR96 GLU97 LEU98 GLY99 TYR100 ASP101 SER102 LEU103 SER104 ALA105 VAL106 THR107 PRO108 PHE109 TYR110 TYR111 LYS112 PHE113 SER114 PHE115 PRO116 GLU117 ILE118 LYS119 HIS120 TYR121 TYR122 ASP123 SER124 ILE125 ILE126 GLU127 ALA128 THR129 GLY130 ASN131 TYR132 MET133 ILE134 VAL135 TYR136 SER137 ILE138 PRO139 PHE140 LEU141 THR142 GLY143 VAL144 ASN145 ILE146 GLY147 VAL148 GLU149 GLN150 PHE151 GLY152 GLU153 LEU154 TYR155 LYS156 ASN157 PRO158 LYS159 VAL160 LEU161 GLY162 VAL163 LYS164 PHE165 THR166 ALA167 GLY168 ASP169 PHE170 TYR171 LEU172 LEU173 GLU174 ARG175 LEU176 LYS177 LYS178 ALA179 TYR180 PRO181 ASN182 HIS183 LEU184 ILE185 TRP186 ALA187 GLY188 PHE189 ASP190 GLU191 MET192 MET193 LEU194 PRO195 ALA196 ALA197 SER198 LEU199 GLY200 VAL201 ASP202 GLY203 ALA204 ILE205 GLY206 SER207 THR208 PHE209 ASN210 VAL211 ASN212 GLY213 VAL214 ARG215 ALA216 ARG217 GLN218 ILE219 PHE220 GLU221 LEU222 THR223 GLN224 ALA225 GLY226 LYS227 LEU228 LYS229 GLU230 ALA231 LEU232 GLU233 ILE234 GLN235 HIS236 VAL237 THR238 ASN239 ASP240 LEU241 ILE242 GLU243 GLY244 ILE245 LEU246 ALA247 ASN248 GLY249 LEU250 TYR251 LEU252 THR253 ILE254 LYS255 GLU256 LEU257 LEU258 LYS259 LEU260 ASP261 GLY262 VAL263 GLU264 ALA265 GLY266 TYR267 CYS268 ARG269 GLU270 PRO271 MET272 THR273 LYS274 GLU275 LEU276 SER277 SER278 GLU279 LYS280 VAL281 ALA282 PHE283 ALA284 LYS285 GLU286 LEU287 LYS288 ALA289 LYS290 TYR291 LEU292 SER293
Unit 4 LYS2 ASN3 LEU4 LYS5 GLY6 ILE7 PHE8 SER9 ALA10 LEU11 LEU12 VAL13 SER14 PHE15 ASN16 ALA17 ASP18 GLY19 SER20 ILE21 ASN22 GLU23 LYS24 GLY25 LEU26 ARG27 GLN28 ILE29 VAL30 ARG31 TYR32 ASN33 ILE34 ASP35 LYS36 MET37 LYS38 VAL39 ASP40 GLY41 LEU42 TYR43 VAL44 GLY45 GLY46 SER47 THR48 GLY49 GLU50 ASN51 PHE52 MET53 LEU54 SER55 THR56 GLU57 GLU58 LYS59 LYS60 GLU61 ILE62 PHE63 ARG64 ILE65 ALA66 LYS67 ASP68 GLU69 ALA70 LYS71 ASP72 GLU73 ILE74 ALA75 LEU76 ILE77 ALA78 GLN79 VAL80 GLY81 SER82 VAL83 ASN84 LEU85 GLN86 GLU87 ALA88 ILE89 GLU90 LEU91 GLY92 LYS93 TYR94 ALA95 THR96 GLU97 LEU98 GLY99 TYR100 ASP101 SER102 LEU103 SER104 ALA105 VAL106 THR107 PRO108 PHE109 TYR110 TYR111 LYS112 PHE113 SER114 PHE115 PRO116 GLU117 ILE118 LYS119 HIS120 TYR121 TYR122 ASP123 SER124 ILE125 ILE126 GLU127 ALA128 THR129 GLY130 ASN131 TYR132 MET133 ILE134 VAL135 TYR136 SER137 ILE138 PRO139 PHE140 LEU141 THR142 GLY143 VAL144 ASN145 ILE146 GLY147 VAL148 GLU149 GLN150 PHE151 GLY152 GLU153 LEU154 TYR155 LYS156 ASN157 PRO158 LYS159 VAL160 LEU161 GLY162 VAL163 LYS164 PHE165 THR166 ALA167 GLY168 ASP169 PHE170 TYR171 LEU172 LEU173 GLU174 ARG175 LEU176 LYS177 LYS178 ALA179 TYR180 PRO181 ASN182 HIS183 LEU184 ILE185 TRP186 ALA187 GLY188 PHE189 ASP190 GLU191 MET192 MET193 LEU194 PRO195 ALA196 ALA197 SER198 LEU199 GLY200 VAL201 ASP202 GLY203 ALA204 ILE205 GLY206 SER207 THR208 PHE209 ASN210 VAL211 ASN212 GLY213 VAL214 ARG215 ALA216 ARG217 GLN218 ILE219 PHE220 GLU221 LEU222 THR223 GLN224 ALA225 GLY226 LYS227 LEU228 LYS229 GLU230 ALA231 LEU232 GLU233 ILE234 GLN235 HIS236 VAL237 THR238 ASN239 ASP240 LEU241 ILE242 GLU243 GLY244 ILE245 LEU246 ALA247 ASN248 GLY249 LEU250 TYR251 LEU252 THR253 ILE254 LYS255 GLU256 LEU257 LEU258 LYS259 LEU260 ASP261 GLY262 VAL263 GLU264 ALA265 GLY266 TYR267 CYS268 ARG269 GLU270 PRO271 MET272 THR273 LYS274 GLU275 LEU276 SER277 SER278 GLU279 LYS280 VAL281 ALA282 PHE283 ALA284 LYS285 GLU286 LEU287 LYS288 ALA289 LYS290 TYR291 LEU292 SER293

Ligands
Unit 5 PO4301 PO4302 EDO303 EDO304 EDO305 EDO306
Unit 6 PO4301 PO4302 EDO303 EDO304 EDO305 EDO306
Unit 7 PO4301 EDO302 EDO303 EDO304 EDO305
Unit 8 PO4301 PO4302 EDO303 EDO304

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany