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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AAR2P IN COMPLEX WITH THE PRP8P RNASEH JAB1/MPN DOMAINS
Keywords U5 SNRNP ASSEMBLY, AAR2, PRP8, SPLICING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4ILG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   A1 CISTRON-SPLICING FACTOR AAR2  A 566 4623 0
2  Protein   PRE-MRNA-SPLICING FACTOR 8  B 252 2030 0
3  Protein   PRE-MRNA-SPLICING FACTOR 8  C 566 4623 0
4  Ligand   PRE-MRNA-SPLICING FACTOR 8  C 1 0 15
5 Water     689 0 689
total       2074 11276 704

Proteins
Unit 1 MET1 ASN2 THR3 VAL4 PRO5 PHE6 THR7 SER8 ALA9 PRO10 ILE11 GLU12 VAL13 THR14 ILE15 GLY16 ILE17 ASP18 GLN19 TYR20 SER21 PHE22 ASN23 VAL24 LYS25 GLU26 ASN27 GLN28 PRO29 PHE30 HIS31 GLY32 ILE33 LYS34 ASP35 ILE36 PRO37 ILE38 GLY39 HIS40 VAL41 HIS42 VAL43 ILE44 HIS45 PHE46 GLN47 HIS48 ALA49 ASP50 ASN51 SER52 SER53 MET54 ARG55 TYR56 GLY57 TYR58 TRP59 PHE60 ASP61 CYS62 ARG63 MET64 GLY65 ASN66 PHE67 TYR68 ILE69 GLN70 TYR71 ASP72 PRO73 LYS74 ASP75 GLY76 LEU77 TYR78 LYS79 MET80 MET81 GLU82 GLU83 ARG84 ASP85 GLY86 ALA87 LYS88 PHE89 GLU90 ASN91 ILE92 VAL93 HIS94 ASN95 PHE96 LYS97 GLU98 ARG99 GLN100 MET101 MET102 VAL103 SER104 TYR105 PRO106 LYS107 ILE108 ASP109 GLU110 ASP111 ASP112 THR113 TRP114 TYR115 ASN116 LEU117 THR118 GLU119 PHE120 VAL121 GLN122 MET123 ASP124 LYS125 ILE126 ARG127 LYS128 ILE129 VAL130 ARG131 LYS132 ASP133 GLU134 ASN135 GLN136 PHE137 SER138 TYR139 VAL140 ASP141 SER142 SER143 MET144 THR145 THR146 VAL147 GLN148 GLU149 ASN150 GLU151 LEU152 SER153 SER154 SER155 SER156 SER157 ASP171 PRO172 ALA173 HIS174 SER175 LEU176 ASN177 TYR178 THR179 VAL180 ILE181 ASN182 PHE183 LYS184 SER185 ARG186 GLU187 ALA188 ILE189 ARG190 PRO191 GLY192 HIS193 GLU194 MET195 GLU196 ASP197 PHE198 LEU199 ASP200 LYS201 SER202 TYR203 TYR204 LEU205 ASN206 THR207 VAL208 MET209 LEU210 GLN211 GLY212 ILE213 PHE214 LYS215 ASN216 SER217 SER218 ASN219 TYR220 PHE221 GLY222 GLU223 LEU224 GLN225 PHE226 ALA227 PHE228 LEU229 ASN230 ALA231 MET232 PHE233 PHE234 GLY235 ASN236 TYR237 GLY238 SER239 SER240 LEU241 GLN242 TRP243 HIS244 ALA245 MET246 ILE247 GLU248 LEU249 ILE250 CYS251 SER252 SER253 ALA254 THR255 VAL256 PRO257 LYS258 HIS259 MET260 LEU261 ASP262 LYS263 LEU264 ASP265 GLU266 ILE267 LEU268 TYR269 TYR270 GLN271 ILE272 LYS273 THR274 LEU275 PRO276 GLU277 GLN278 TYR279 SER280 ASP281 ILE282 LEU283 LEU284 ASN285 GLU286 ARG287 VAL288 TRP289 ASN290 ILE291 CYS292 LEU293 TYR294 SER295 SER296 PHE297 GLN298 LYS299 ASN300 SER301 LEU302 HIS303 ASN304 THR305 GLU306 LYS307 ILE308 MET309 GLU310 ASN311 LYS312 TYR313 PRO314 GLU315 LEU316 LEU317 ASP339 ASP340 GLU341 HIS342 ASN343 PRO344 THR345 ILE346 VAL347 GLY348 GLY349 LEU350 TYR351 TYR352 GLN353 ARG354 PRO355 SER2148 LYS2149 ASN2150 GLU2151 TRP2152 ARG2153 LYS2154 SER2155 ALA2156 ILE2157 ALA2158 ASN2159 THR2160 LEU2161 LEU2162 TYR2163 LEU2164 ARG2165 LEU2166 LYS2167 ASN2168 ILE2169 TYR2170 VAL2171 SER2172 ALA2173 ASP2174 ASP2175 PHE2176 VAL2177 GLU2178 GLU2179 GLN2180 ASN2181 VAL2182 TYR2183 VAL2184 LEU2185 PRO2186 LYS2187 ASN2188 LEU2189 LEU2190 LYS2191 LYS2192 PHE2193 ILE2194 GLU2195 ILE2196 SER2197 ASP2198 VAL2199 LYS2200 ILE2201 GLN2202 VAL2203 ALA2204 ALA2205 PHE2206 ILE2207 TYR2208 GLY2209 MET2210 SER2211 ALA2212 LYS2213 ASP2214 HIS2215 PRO2216 LYS2217 VAL2218 LYS2219 GLU2220 ILE2221 LYS2222 THR2223 VAL2224 VAL2225 LEU2226 VAL2227 PRO2228 GLN2229 LEU2230 GLY2231 HIS2232 VAL2233 GLY2234 SER2235 VAL2236 GLN2237 ILE2238 SER2239 ASN2240 ILE2241 PRO2242 ASP2243 ILE2244 GLY2245 ASP2246 LEU2247 PRO2248 ASP2249 THR2250 GLU2251 GLY2252 LEU2253 GLU2254 LEU2255 LEU2256 GLY2257 TRP2258 ILE2259 HIS2260 THR2261 GLN2262 THR2263 GLU2264 GLU2265 LEU2266 LYS2267 PHE2268 MET2269 ALA2270 ALA2271 SER2272 GLU2273 VAL2274 ALA2275 THR2276 HIS2277 SER2278 LYS2279 LEU2280 PHE2281 ALA2282 ASP2283 LYS2284 LYS2285 ARG2286 ASP2287 CYS2288 ILE2289 ASP2290 ILE2291 SER2292 ILE2293 PHE2294 SER2295 THR2296 PRO2297 GLY2298 SER2299 VAL2300 SER2301 LEU2302 SER2303 ALA2304 TYR2305 ASN2306 LEU2307 THR2308 ASP2309 GLU2310 GLY2311 TYR2312 GLN2313 TRP2314 GLY2315 GLU2316 GLU2317 ASN2318 LYS2319 ASP2320 ILE2321 MET2322 ASN2323 VAL2324 LEU2325 SER2326 GLU2327 GLY2328 PHE2329 GLU2330 PRO2331 THR2332 PHE2333 SER2334 THR2335 HIS2336 ALA2337 GLN2338 LEU2339 LEU2340 LEU2341 SER2342 ASP2343 ARG2344 ILE2345 THR2346 GLY2347 ASN2348 PHE2349 ILE2350 ILE2351 PRO2352 SER2353 GLY2354 ASN2355 VAL2356 TRP2357 ASN2358 TYR2359 THR2360 PHE2361 MET2362 GLY2363 THR2364 ALA2365 PHE2366 ASN2367 GLN2368 GLU2369 GLY2370 ASP2371 TYR2372 ASN2373 PHE2374 LYS2375 TYR2376 GLY2377 ILE2378 PRO2379 LEU2380 GLU2381 PHE2382 TYR2383 ASN2384 GLU2385 MET2386 HIS2387 ARG2388 PRO2389 VAL2390 HIS2391 PHE2392
Unit 2 ALA1834 MET1835 ASN1836 SER1837 SER1838 ASN1839 TYR1840 ALA1841 GLU1842 LEU1843 PHE1844 ASN1845 ASN1846 ASP1847 ILE1848 LYS1849 LEU1850 PHE1851 VAL1852 ASP1853 ASP1854 THR1855 ASN1856 VAL1857 TYR1858 ARG1859 VAL1860 THR1861 VAL1862 HIS1863 LYS1864 THR1865 PHE1866 GLU1867 GLY1868 ASN1869 VAL1870 ALA1871 THR1872 LYS1873 ALA1874 ILE1875 ASN1876 GLY1877 CYS1878 ILE1879 PHE1880 THR1881 LEU1882 ASN1883 PRO1884 LYS1885 THR1886 GLY1887 HIS1888 LEU1889 PHE1890 LEU1891 LYS1892 ILE1893 ILE1894 HIS1895 THR1896 SER1897 VAL1898 TRP1899 ALA1900 GLY1901 GLN1902 LYS1903 ARG1904 LEU1905 SER1906 GLN1907 LEU1908 ALA1909 LYS1910 TRP1911 LYS1912 THR1913 ALA1914 GLU1915 GLU1916 VAL1917 SER1918 ALA1919 LEU1920 VAL1921 ARG1922 SER1923 LEU1924 PRO1925 LYS1926 GLU1927 GLU1928 GLN1929 PRO1930 LYS1931 GLN1932 ILE1933 ILE1934 VAL1935 THR1936 ARG1937 LYS1938 ALA1939 MET1940 LEU1941 ASP1942 PRO1943 LEU1944 GLU1945 VAL1946 HIS1947 MET1948 LEU1949 ASP1950 PHE1951 PRO1952 ASN1953 ILE1954 ALA1955 ILE1956 ARG1957 PRO1958 THR1959 GLU1960 LEU1961 ARG1962 LEU1963 PRO1964 PHE1965 SER1966 ALA1967 ALA1968 MET1969 SER1970 ILE1971 ASP1972 LYS1973 LEU1974 SER1975 ASP1976 VAL1977 VAL1978 MET1979 LYS1980 ALA1981 THR1982 GLU1983 PRO1984 GLN1985 MET1986 VAL1987 LEU1988 PHE1989 ASN1990 ILE1991 TYR1992 ASP1993 ASP1994 TRP1995 LEU1996 ASP1997 ARG1998 ILE1999 SER2000 SER2001 TYR2002 THR2003 ALA2004 PHE2005 SER2006 ARG2007 LEU2008 THR2009 LEU2010 LEU2011 LEU2012 ARG2013 ALA2014 LEU2015 LYS2016 THR2017 ASN2018 GLU2019 GLU2020 SER2021 ALA2022 LYS2023 MET2024 ILE2025 LEU2026 LEU2027 SER2028 ASP2029 PRO2030 THR2031 ILE2032 THR2033 ILE2034 LYS2035 SER2036 TYR2037 HIS2038 LEU2039 TRP2040 PRO2041 SER2042 PHE2043 THR2044 ASP2045 GLU2046 GLN2047 TRP2048 ILE2049 THR2050 ILE2051 GLU2052 SER2053 GLN2054 MET2055 ARG2056 ASP2057 LEU2058 ILE2059 LEU2060 THR2061 GLU2062 TYR2063 GLY2064 ARG2065 LYS2066 TYR2067 ASN2068 VAL2069 ASN2070 ILE2071 SER2072 ALA2073 LEU2074 THR2075 GLN2076 THR2077 GLU2078 ILE2079 LYS2080 ASP2081 ILE2082 ILE2083 LEU2084 GLY2085
Unit 3 MET1 ASN2 THR3 VAL4 PRO5 PHE6 THR7 SER8 ALA9 PRO10 ILE11 GLU12 VAL13 THR14 ILE15 GLY16 ILE17 ASP18 GLN19 TYR20 SER21 PHE22 ASN23 VAL24 LYS25 GLU26 ASN27 GLN28 PRO29 PHE30 HIS31 GLY32 ILE33 LYS34 ASP35 ILE36 PRO37 ILE38 GLY39 HIS40 VAL41 HIS42 VAL43 ILE44 HIS45 PHE46 GLN47 HIS48 ALA49 ASP50 ASN51 SER52 SER53 MET54 ARG55 TYR56 GLY57 TYR58 TRP59 PHE60 ASP61 CYS62 ARG63 MET64 GLY65 ASN66 PHE67 TYR68 ILE69 GLN70 TYR71 ASP72 PRO73 LYS74 ASP75 GLY76 LEU77 TYR78 LYS79 MET80 MET81 GLU82 GLU83 ARG84 ASP85 GLY86 ALA87 LYS88 PHE89 GLU90 ASN91 ILE92 VAL93 HIS94 ASN95 PHE96 LYS97 GLU98 ARG99 GLN100 MET101 MET102 VAL103 SER104 TYR105 PRO106 LYS107 ILE108 ASP109 GLU110 ASP111 ASP112 THR113 TRP114 TYR115 ASN116 LEU117 THR118 GLU119 PHE120 VAL121 GLN122 MET123 ASP124 LYS125 ILE126 ARG127 LYS128 ILE129 VAL130 ARG131 LYS132 ASP133 GLU134 ASN135 GLN136 PHE137 SER138 TYR139 VAL140 ASP141 SER142 SER143 MET144 THR145 THR146 VAL147 GLN148 GLU149 ASN150 GLU151 LEU152 SER153 SER154 SER155 SER156 SER157 ASP171 PRO172 ALA173 HIS174 SER175 LEU176 ASN177 TYR178 THR179 VAL180 ILE181 ASN182 PHE183 LYS184 SER185 ARG186 GLU187 ALA188 ILE189 ARG190 PRO191 GLY192 HIS193 GLU194 MET195 GLU196 ASP197 PHE198 LEU199 ASP200 LYS201 SER202 TYR203 TYR204 LEU205 ASN206 THR207 VAL208 MET209 LEU210 GLN211 GLY212 ILE213 PHE214 LYS215 ASN216 SER217 SER218 ASN219 TYR220 PHE221 GLY222 GLU223 LEU224 GLN225 PHE226 ALA227 PHE228 LEU229 ASN230 ALA231 MET232 PHE233 PHE234 GLY235 ASN236 TYR237 GLY238 SER239 SER240 LEU241 GLN242 TRP243 HIS244 ALA245 MET246 ILE247 GLU248 LEU249 ILE250 CYS251 SER252 SER253 ALA254 THR255 VAL256 PRO257 LYS258 HIS259 MET260 LEU261 ASP262 LYS263 LEU264 ASP265 GLU266 ILE267 LEU268 TYR269 TYR270 GLN271 ILE272 LYS273 THR274 LEU275 PRO276 GLU277 GLN278 TYR279 SER280 ASP281 ILE282 LEU283 LEU284 ASN285 GLU286 ARG287 VAL288 TRP289 ASN290 ILE291 CYS292 LEU293 TYR294 SER295 SER296 PHE297 GLN298 LYS299 ASN300 SER301 LEU302 HIS303 ASN304 THR305 GLU306 LYS307 ILE308 MET309 GLU310 ASN311 LYS312 TYR313 PRO314 GLU315 LEU316 LEU317 ASP339 ASP340 GLU341 HIS342 ASN343 PRO344 THR345 ILE346 VAL347 GLY348 GLY349 LEU350 TYR351 TYR352 GLN353 ARG354 PRO355 SER2148 LYS2149 ASN2150 GLU2151 TRP2152 ARG2153 LYS2154 SER2155 ALA2156 ILE2157 ALA2158 ASN2159 THR2160 LEU2161 LEU2162 TYR2163 LEU2164 ARG2165 LEU2166 LYS2167 ASN2168 ILE2169 TYR2170 VAL2171 SER2172 ALA2173 ASP2174 ASP2175 PHE2176 VAL2177 GLU2178 GLU2179 GLN2180 ASN2181 VAL2182 TYR2183 VAL2184 LEU2185 PRO2186 LYS2187 ASN2188 LEU2189 LEU2190 LYS2191 LYS2192 PHE2193 ILE2194 GLU2195 ILE2196 SER2197 ASP2198 VAL2199 LYS2200 ILE2201 GLN2202 VAL2203 ALA2204 ALA2205 PHE2206 ILE2207 TYR2208 GLY2209 MET2210 SER2211 ALA2212 LYS2213 ASP2214 HIS2215 PRO2216 LYS2217 VAL2218 LYS2219 GLU2220 ILE2221 LYS2222 THR2223 VAL2224 VAL2225 LEU2226 VAL2227 PRO2228 GLN2229 LEU2230 GLY2231 HIS2232 VAL2233 GLY2234 SER2235 VAL2236 GLN2237 ILE2238 SER2239 ASN2240 ILE2241 PRO2242 ASP2243 ILE2244 GLY2245 ASP2246 LEU2247 PRO2248 ASP2249 THR2250 GLU2251 GLY2252 LEU2253 GLU2254 LEU2255 LEU2256 GLY2257 TRP2258 ILE2259 HIS2260 THR2261 GLN2262 THR2263 GLU2264 GLU2265 LEU2266 LYS2267 PHE2268 MET2269 ALA2270 ALA2271 SER2272 GLU2273 VAL2274 ALA2275 THR2276 HIS2277 SER2278 LYS2279 LEU2280 PHE2281 ALA2282 ASP2283 LYS2284 LYS2285 ARG2286 ASP2287 CYS2288 ILE2289 ASP2290 ILE2291 SER2292 ILE2293 PHE2294 SER2295 THR2296 PRO2297 GLY2298 SER2299 VAL2300 SER2301 LEU2302 SER2303 ALA2304 TYR2305 ASN2306 LEU2307 THR2308 ASP2309 GLU2310 GLY2311 TYR2312 GLN2313 TRP2314 GLY2315 GLU2316 GLU2317 ASN2318 LYS2319 ASP2320 ILE2321 MET2322 ASN2323 VAL2324 LEU2325 SER2326 GLU2327 GLY2328 PHE2329 GLU2330 PRO2331 THR2332 PHE2333 SER2334 THR2335 HIS2336 ALA2337 GLN2338 LEU2339 LEU2340 LEU2341 SER2342 ASP2343 ARG2344 ILE2345 THR2346 GLY2347 ASN2348 PHE2349 ILE2350 ILE2351 PRO2352 SER2353 GLY2354 ASN2355 VAL2356 TRP2357 ASN2358 TYR2359 THR2360 PHE2361 MET2362 GLY2363 THR2364 ALA2365 PHE2366 ASN2367 GLN2368 GLU2369 GLY2370 ASP2371 TYR2372 ASN2373 PHE2374 LYS2375 TYR2376 GLY2377 ILE2378 PRO2379 LEU2380 GLU2381 PHE2382 TYR2383 ASN2384 GLU2385 MET2386 HIS2387 ARG2388 PRO2389 VAL2390 HIS2391 PHE2392

Ligands
Unit 4 EPE2501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany