4IJD - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF METHYLTRANSFERASE DOMAIN OF HUMAN PR DO CONTAINING PROTEIN 9
• Keywords: PRDM9, METHYLTRANSFERASE, STRUCTURAL GENOMICS, STRUCTURAL GE CONSORTIUM, SGC, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4IJD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9	A	215	1616	24
2	Protein	HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9	B	215	1611	24
3	Ligand	HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9	A	18	0	18
4	Ligand	HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9	B	10	0	10
5	Water			59	0	59
total				517	3227	135

Proteins

Unit 1

SER 195 GLU 196 PRO 197 GLN 198 ASP 199 ASP 200 ASP 201 TYR 202 LEU 203 TYR 204 CYS 205 GLU 206 MSE 207 CYS 208 GLN 209 ASN 210 PHE 211 PHE 212 ILE 213 ASP 214 SER 215 CYS 216 ALA 217 ALA 218 HIS 219 GLY 220 PRO 221 PRO 222 THR 223 PHE 224 VAL 225 LYS 226 ASP 227 SER 228 ALA 229 VAL 230 ASP 231 LYS 232 GLY 233 HIS 234 PRO 235 ASN 236 ARG 237 SER 238 ALA 239 LEU 240 SER 241 LEU 242 PRO 243 PRO 244 GLY 245 LEU 246 ARG 247 ILE 248 GLY 249 PRO 250 SER 251 GLY 252 ILE 253 PRO 254 GLN 255 ALA 256 GLY 257 LEU 258 GLY 259 VAL 260 TRP 261 ASN 262 GLU 263 ALA 264 SER 265 ASP 266 LEU 267 PRO 268 LEU 269 GLY 270 LEU 271 HIS 272 PHE 273 GLY 274 PRO 275 TYR 276 GLU 277 GLY 278 ARG 279 ILE 280 THR 281 GLU 282 ASP 283 GLU 284 GLU 285 ALA 286 ALA 287 ASN 288 ASN 289 GLY 290 TYR 291 SER 292 TRP 293 LEU 294 ILE 295 THR 296 LYS 297 GLY 298 ARG 299 ASN 300 CYS 301 TYR 302 GLU 303 TYR 304 VAL 305 ASP 306 GLY 307 LYS 308 ASP 309 LYS 310 SER 311 TRP 312 ALA 313 ASN 314 TRP 315 MSE 316 ARG 317 TYR 318 VAL 319 ASN 320 CYS 321 ALA 322 ARG 323 ASP 324 ASP 325 GLU 326 GLU 327 GLN 328 ASN 329 LEU 330 VAL 331 ALA 332 PHE 333 GLN 334 TYR 335 HIS 336 ARG 337 GLN 338 ILE 339 PHE 340 TYR 341 ARG 342 THR 343 CYS 344 ARG 345 VAL 346 ILE 347 ARG 348 PRO 349 GLY 350 CYS 351 GLU 352 LEU 353 LEU 354 VAL 355 TRP 356 TYR 357 GLY 358 ASP 359 GLU 360 TYR 361 GLY 362 GLN 363 GLU 364 LEU 365 GLY 366 ILE 367 LYS 368 TRP 369 GLY 370 SER 371 LYS 372 TRP 373 LYS 374 LYS 375 GLU 376 LEU 377 MSE 378 PRO 383 LYS 384 PRO 385 GLU 386 ILE 387 HIS 388 PRO 389 CYS 390 PRO 391 SER 392 CYS 393 CYS 394 LEU 395 ALA 396 PHE 397 SER 398 SER 399 GLN 400 LYS 401 PHE 402 LEU 403 SER 404 GLN 405 HIS 406 VAL 407 GLU 408 ARG 409 ASN 410 HIS 411 SER 412 SER 413

Unit 2

SER 195 GLU 196 PRO 197 GLN 198 ASP 199 ASP 200 ASP 201 TYR 202 LEU 203 TYR 204 CYS 205 GLU 206 MSE 207 CYS 208 GLN 209 ASN 210 PHE 211 PHE 212 ILE 213 ASP 214 SER 215 CYS 216 ALA 217 ALA 218 HIS 219 GLY 220 PRO 221 PRO 222 THR 223 PHE 224 VAL 225 LYS 226 ASP 227 SER 228 ALA 229 VAL 230 ASP 231 LYS 232 GLY 233 HIS 234 PRO 235 ASN 236 ARG 237 SER 238 ALA 239 LEU 240 SER 241 LEU 242 PRO 243 PRO 244 GLY 245 LEU 246 ARG 247 ILE 248 GLY 249 PRO 250 SER 251 GLY 252 ILE 253 PRO 254 GLN 255 ALA 256 GLY 257 LEU 258 GLY 259 VAL 260 TRP 261 ASN 262 GLU 263 ALA 264 SER 265 ASP 266 LEU 267 PRO 268 LEU 269 GLY 270 LEU 271 HIS 272 PHE 273 GLY 274 PRO 275 TYR 276 GLU 277 GLY 278 ARG 279 ILE 280 THR 281 GLU 282 ASP 283 GLU 284 GLU 285 ALA 286 ALA 287 ASN 288 ASN 289 GLY 290 TYR 291 SER 292 TRP 293 LEU 294 ILE 295 THR 296 LYS 297 GLY 298 ARG 299 ASN 300 CYS 301 TYR 302 GLU 303 TYR 304 VAL 305 ASP 306 GLY 307 LYS 308 ASP 309 LYS 310 SER 311 TRP 312 ALA 313 ASN 314 TRP 315 MSE 316 ARG 317 TYR 318 VAL 319 ASN 320 CYS 321 ALA 322 ARG 323 ASP 324 ASP 325 GLU 326 GLU 327 GLN 328 ASN 329 LEU 330 VAL 331 ALA 332 PHE 333 GLN 334 TYR 335 HIS 336 ARG 337 GLN 338 ILE 339 PHE 340 TYR 341 ARG 342 THR 343 CYS 344 ARG 345 VAL 346 ILE 347 ARG 348 PRO 349 GLY 350 CYS 351 GLU 352 LEU 353 LEU 354 VAL 355 TRP 356 TYR 357 GLY 358 ASP 359 GLU 360 TYR 361 GLY 362 GLN 363 GLU 364 LEU 365 GLY 366 ILE 367 LYS 368 TRP 369 GLY 370 SER 371 LYS 372 TRP 373 LYS 374 LYS 375 GLU 376 LEU 377 MSE 378 ARG 381 GLU 382 PRO 383 LYS 384 PRO 385 GLU 386 ILE 387 HIS 388 PRO 389 CYS 390 PRO 391 SER 392 CYS 393 CYS 394 LEU 395 ALA 396 PHE 397 SER 398 SER 399 GLN 400 LYS 401 PHE 402 LEU 403 SER 404 GLN 405 HIS 406 VAL 407 GLU 408 ARG 409 ASN 410 HIS 411

Ligands

Unit 3	ZN 501 ZN 502 UNX 503 UNX 504 UNX 505 UNX 506 UNX 507 UNX 508 UNX 509 UNX 510 UNX 511 UNX 512 UNX 513 UNX 514 UNX 515 UNX 516 UNX 517 UNX 518
Unit 4	ZN 501 ZN 502 UNX 503 UNX 504 UNX 505 UNX 506 UNX 507 UNX 508 UNX 509 UNX 510