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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE STREPTOCOC GORDONII ADHESIN SGO0707
Keywords BETA-SANDWICH FOLDS, ADHESIN, COLLAGEN-BINDING, ORAL KERATIN CELL WALL ANCHORED PROTEIN, CELL ADHESION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4IGB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LPXTG CELL WALL SURFACE PROTEIN  A 426 3348 0
2  Protein   LPXTG CELL WALL SURFACE PROTEIN  B 435 3417 0
3  Protein   LPXTG CELL WALL SURFACE PROTEIN  C 433 3395 0
4  Protein   LPXTG CELL WALL SURFACE PROTEIN  D 416 3264 0
5  Ligand   LPXTG CELL WALL SURFACE PROTEIN  A 5 0 21
6  Ligand   LPXTG CELL WALL SURFACE PROTEIN  B 4 0 17
7  Ligand   LPXTG CELL WALL SURFACE PROTEIN  C 5 0 21
8  Ligand   LPXTG CELL WALL SURFACE PROTEIN  D 4 0 17
9 Water     1282 0 1282
total       3010 13424 1358
Proteins
Unit 1 LEU-6 TYR-5 PHE-4 GLN-3 GLY-2 ALA-1 MET0 ALA36 LEU37 GLU38 GLU39 ILE40 LYS41 ASN42 GLY43 THR44 ASP45 ILE46 SER47 THR48 LEU49 ASP50 ILE51 ARG52 LYS53 PHE54 ASN55 LEU56 ASN57 ILE58 ASN59 ASN60 VAL61 SER62 VAL63 LEU64 SER65 LYS66 SER67 GLN68 SER69 VAL70 ASP71 GLN72 PHE73 HIS74 LEU75 SER76 ASN77 PRO78 HIS79 TYR80 GLU81 TYR82 LEU83 SER84 GLY85 GLY86 ALA87 TYR88 PRO89 GLY90 GLU91 MET92 GLU93 ASN94 PHE95 THR96 LEU97 LYS98 VAL99 ASP100 LYS101 SER102 LYS103 LYS104 GLN105 ASP106 GLN107 VAL108 PHE109 GLU110 ASN111 PRO112 LEU113 SER114 LEU115 LYS116 PHE117 THR118 ASN119 ILE120 GLY121 THR122 VAL123 ASN124 GLY125 LYS126 GLN127 VAL128 ASP129 ALA130 TYR131 LEU132 ASN133 PHE134 ASN135 LYS136 VAL137 THR138 LEU139 HIS140 TYR141 LEU142 ASN143 THR144 ALA145 GLN146 ALA147 GLU148 SER149 GLU150 MET151 ASN152 SER153 ALA154 GLN155 LYS156 SER157 THR158 VAL159 GLU160 PHE161 PHE162 SER163 ILE164 SER165 GLU166 LEU167 TRP168 GLU169 SER170 ASN171 ALA172 PHE173 GLU174 ILE175 GLY176 ASN177 VAL178 PRO179 TYR180 VAL181 ASP182 ALA183 ASN184 HIS185 ASP186 TYR187 ILE188 MET189 ASN190 LYS191 ALA192 PHE193 TRP194 ILE195 ASP196 ALA197 ASP198 VAL199 THR200 ALA201 GLU202 ILE203 ARG204 TYR205 ALA206 ASP207 GLY208 THR209 GLU210 THR211 ASP212 LEU213 LYS214 LEU215 VAL216 MET217 LYS218 PRO219 THR220 ASP221 ILE222 ASP223 ALA224 ILE225 ASP226 ALA227 ASN228 ASN229 LEU230 LYS231 GLU232 THR233 PHE234 TYR235 VAL236 LYS237 ASN238 TYR239 GLN240 ASN241 ASP242 VAL243 ASN244 LEU245 ARG246 LEU247 MET248 ASN249 ASN250 ALA251 ASN252 VAL253 LEU254 VAL255 GLN256 GLU257 GLU258 ALA259 SER260 ASP261 ARG262 THR263 SER264 TRP265 ILE266 ALA267 THR268 GLN269 ILE270 THR271 GLY272 GLY273 SER274 TYR275 ASN276 GLU277 ASN278 ASN279 VAL280 SER281 GLY282 LEU283 ALA284 LEU285 ARG286 SER287 ASN288 SER289 ASN290 SER291 MET292 ASN293 PHE294 GLY295 TYR296 SER297 SER298 THR299 GLU300 THR301 CYS302 SER303 ALA304 VAL305 PHE306 GLY307 LEU308 TYR309 ILE310 GLU311 LYS312 ILE313 ASP314 PRO315 ARG316 PRO317 VAL318 LEU319 GLU320 VAL321 ASP322 PRO323 ALA324 GLU325 ILE326 PRO327 ALA328 LYS329 ASP330 GLY331 GLN332 ASP333 VAL334 THR335 TYR336 LYS337 ALA338 THR339 PHE340 LYS341 VAL342 PRO343 VAL344 PRO345 GLY346 LYS347 ASP348 ILE349 LEU350 ALA351 ALA352 PRO353 SER354 SER355 ILE356 GLU357 MET358 VAL359 GLN360 LYS361 PHE362 ASP363 GLU364 ARG365 LEU366 ASP367 TYR368 LYS369 GLU370 LEU371 LYS372 VAL373 GLU374 SER375 GLY376 GLY377 VAL378 THR379 LEU380 GLN381 GLU382 GLY383 ARG384 ASP385 TYR386 THR387 ILE388 GLU389 LYS390 THR391 GLY392 GLN393 THR394 VAL395 THR396 VAL397 LYS398 MET399 THR400 PRO401 GLU402 TYR403 LEU404 LYS405 GLY406 ASN407 SER408 SER409 SER410 ASP411 ILE412 ILE413 ILE414 THR415 TYR416 LYS417 THR418 ALA419 THR420 ASN421 LYS422 LYS423 VAL424 GLU425 GLU426 SER429 GLU430 LYS431 ILE432 ASP433 ASN434 THR435 VAL436 THR437 LEU438 HIS439 VAL440 ASP441 ASN442 LEU443 SER444 ALA445 PRO446 SER447 ASN448 GLN449 VAL450 SER451 THR452 ALA453 LEU454 LEU455 TYR456
Unit 2 PRO-11 THR-10 THR-9 GLU-8 ASN-7 LEU-6 TYR-5 PHE-4 GLN-3 GLY-2 ALA-1 MET0 ALA36 LEU37 GLU38 GLU39 ILE40 LYS41 ASN42 GLY43 THR44 ASP45 ILE46 SER47 THR48 LEU49 ASP50 ILE51 ARG52 LYS53 PHE54 ASN55 LEU56 ASN57 ILE58 ASN59 ASN60 VAL61 SER62 VAL63 LEU64 SER65 LYS66 SER67 GLN68 SER69 VAL70 ASP71 GLN72 PHE73 HIS74 LEU75 SER76 ASN77 PRO78 HIS79 TYR80 GLU81 TYR82 LEU83 SER84 GLY85 GLY86 ALA87 TYR88 PRO89 GLY90 GLU91 MET92 GLU93 ASN94 PHE95 THR96 LEU97 LYS98 VAL99 ASP100 LYS101 SER102 LYS103 LYS104 GLN105 ASP106 GLN107 VAL108 PHE109 GLU110 ASN111 PRO112 LEU113 SER114 LEU115 LYS116 PHE117 THR118 ASN119 ILE120 GLY121 THR122 VAL123 ASN124 GLY125 LYS126 GLN127 VAL128 ASP129 ALA130 TYR131 LEU132 ASN133 PHE134 ASN135 LYS136 VAL137 THR138 LEU139 HIS140 TYR141 LEU142 ASN143 THR144 ALA145 GLN146 ALA147 GLU148 SER149 GLU150 MET151 ASN152 SER153 ALA154 GLN155 LYS156 SER157 THR158 VAL159 GLU160 PHE161 PHE162 SER163 ILE164 SER165 GLU166 LEU167 TRP168 GLU169 SER170 ASN171 ALA172 PHE173 GLU174 ILE175 GLY176 ASN177 VAL178 PRO179 TYR180 VAL181 ASP182 ALA183 ASN184 HIS185 ASP186 TYR187 ILE188 MET189 ASN190 LYS191 ALA192 PHE193 TRP194 ILE195 ASP196 ALA197 ASP198 VAL199 THR200 ALA201 GLU202 ILE203 ARG204 TYR205 ALA206 ASP207 GLY208 THR209 GLU210 THR211 ASP212 LEU213 LYS214 LEU215 VAL216 MET217 LYS218 PRO219 THR220 ASP221 ILE222 ASP223 ALA224 ILE225 ASP226 ALA227 ASN228 ASN229 LEU230 LYS231 GLU232 THR233 PHE234 TYR235 VAL236 LYS237 ASN238 TYR239 GLN240 ASN241 ASP242 VAL243 ASN244 LEU245 ARG246 LEU247 MET248 ASN249 ASN250 ALA251 ASN252 VAL253 LEU254 VAL255 GLN256 GLU257 GLU258 ALA259 SER260 ASP261 ARG262 THR263 SER264 TRP265 ILE266 ALA267 THR268 GLN269 ILE270 THR271 GLY272 GLY273 SER274 TYR275 ASN276 GLU277 ASN278 ASN279 VAL280 SER281 GLY282 LEU283 ALA284 LEU285 ARG286 SER287 ASN288 SER289 ASN290 SER291 MET292 ASN293 PHE294 GLY295 TYR296 SER297 SER298 THR299 GLU300 THR301 CYS302 SER303 ALA304 VAL305 PHE306 GLY307 LEU308 TYR309 ILE310 GLU311 LYS312 ILE313 ASP314 PRO315 ARG316 PRO317 VAL318 LEU319 GLU320 VAL321 ASP322 PRO323 ALA324 GLU325 ILE326 PRO327 ALA328 LYS329 ASP330 GLY331 GLN332 ASP333 VAL334 THR335 TYR336 LYS337 ALA338 THR339 PHE340 LYS341 VAL342 PRO343 VAL344 PRO345 GLY346 LYS347 ASP348 ILE349 LEU350 ALA351 ALA352 PRO353 SER354 SER355 ILE356 GLU357 MET358 VAL359 GLN360 LYS361 PHE362 ASP363 GLU364 ARG365 LEU366 ASP367 TYR368 LYS369 GLU370 LEU371 LYS372 VAL373 GLU374 SER375 GLY376 GLY377 VAL378 THR379 LEU380 GLN381 GLU382 GLY383 ARG384 ASP385 TYR386 THR387 ILE388 GLU389 LYS390 THR391 GLY392 GLN393 THR394 VAL395 THR396 VAL397 LYS398 MET399 THR400 PRO401 GLU402 TYR403 LEU404 LYS405 GLY406 ASN407 SER408 SER409 SER410 ASP411 ILE412 ILE413 ILE414 THR415 TYR416 LYS417 THR418 ALA419 THR420 ASN421 LYS422 LYS423 VAL424 GLU425 GLU426 LYS427 GLY428 SER429 GLU430 LYS431 ILE432 ASP433 ASN434 THR435 VAL436 THR437 LEU438 HIS439 VAL440 ASP441 ASN442 LEU443 SER444 ALA445 PRO446 SER447 ASN448 GLN449 VAL450 SER451 THR452 ALA453 LEU454 LEU455 TYR456 GLU457 LYS458
Unit 3 ILE-12 PRO-11 THR-10 THR-9 GLU-8 ASN-7 LEU-6 TYR-5 PHE-4 GLN-3 GLY-2 ALA-1 MET0 ALA36 LEU37 GLU38 GLU39 ILE40 LYS41 ASN42 GLY43 THR44 ASP45 ILE46 SER47 THR48 LEU49 ASP50 ILE51 ARG52 LYS53 PHE54 ASN55 LEU56 ASN57 ILE58 ASN59 ASN60 VAL61 SER62 VAL63 LEU64 SER65 LYS66 SER67 GLN68 SER69 VAL70 ASP71 GLN72 PHE73 HIS74 LEU75 SER76 ASN77 PRO78 HIS79 TYR80 GLU81 TYR82 LEU83 SER84 GLY85 GLY86 ALA87 TYR88 PRO89 GLY90 GLU91 MET92 GLU93 ASN94 PHE95 THR96 LEU97 LYS98 VAL99 ASP100 LYS101 SER102 LYS103 LYS104 GLN105 ASP106 GLN107 VAL108 PHE109 GLU110 ASN111 PRO112 LEU113 SER114 LEU115 LYS116 PHE117 THR118 ASN119 ILE120 GLY121 THR122 VAL123 ASN124 GLY125 LYS126 GLN127 VAL128 ASP129 ALA130 TYR131 LEU132 ASN133 PHE134 ASN135 LYS136 VAL137 THR138 LEU139 HIS140 TYR141 LEU142 ASN143 THR144 ALA145 GLN146 ALA147 GLU148 SER149 GLU150 MET151 ASN152 SER153 ALA154 GLN155 LYS156 SER157 THR158 VAL159 GLU160 PHE161 PHE162 SER163 ILE164 SER165 GLU166 LEU167 TRP168 GLU169 SER170 ASN171 ALA172 PHE173 GLU174 ILE175 GLY176 ASN177 VAL178 PRO179 TYR180 VAL181 ASP182 ALA183 ASN184 HIS185 ASP186 TYR187 ILE188 MET189 ASN190 LYS191 ALA192 PHE193 TRP194 ILE195 ASP196 ALA197 ASP198 VAL199 THR200 ALA201 GLU202 ILE203 ARG204 TYR205 ALA206 ASP207 GLY208 THR209 GLU210 THR211 ASP212 LEU213 LYS214 LEU215 VAL216 MET217 LYS218 PRO219 THR220 ASP221 ILE222 ASP223 ALA224 ILE225 ASP226 ALA227 ASN228 ASN229 LEU230 LYS231 GLU232 THR233 PHE234 TYR235 VAL236 LYS237 ASN238 TYR239 GLN240 ASN241 ASP242 VAL243 ASN244 LEU245 ARG246 LEU247 MET248 ASN249 ASN250 ALA251 ASN252 VAL253 LEU254 VAL255 GLN256 GLU257 GLU258 ALA259 SER260 ASP261 ARG262 THR263 SER264 TRP265 ILE266 ALA267 THR268 GLN269 ILE270 THR271 GLY272 GLY273 SER274 TYR275 ASN276 GLU277 ASN278 ASN279 VAL280 SER281 GLY282 LEU283 ALA284 LEU285 ARG286 SER287 ASN288 SER289 ASN290 SER291 MET292 ASN293 PHE294 GLY295 TYR296 SER297 SER298 THR299 GLU300 THR301 CYS302 SER303 ALA304 VAL305 PHE306 GLY307 LEU308 TYR309 ILE310 GLU311 LYS312 ILE313 ASP314 PRO315 ARG316 PRO317 VAL318 LEU319 GLU320 VAL321 ASP322 PRO323 ALA324 GLU325 ILE326 PRO327 ALA328 LYS329 ASP330 GLY331 GLN332 ASP333 VAL334 THR335 TYR336 LYS337 ALA338 THR339 PHE340 LYS341 VAL342 PRO343 VAL344 PRO345 GLY346 LYS347 ASP348 ILE349 LEU350 ALA351 ALA352 PRO353 SER354 SER355 ILE356 GLU357 MET358 VAL359 GLN360 LYS361 PHE362 ASP363 GLU364 ARG365 LEU366 ASP367 TYR368 LYS369 GLU370 LEU371 LYS372 VAL373 GLU374 SER375 GLY376 GLY377 VAL378 THR379 LEU380 GLN381 GLU382 GLY383 ARG384 ASP385 TYR386 THR387 ILE388 GLU389 LYS390 THR391 GLY392 GLN393 THR394 VAL395 THR396 VAL397 LYS398 MET399 THR400 PRO401 GLU402 TYR403 LEU404 LYS405 GLY406 ASN407 SER408 SER409 SER410 ASP411 ILE412 ILE413 ILE414 THR415 TYR416 LYS417 THR418 ALA419 THR420 ASN421 LYS422 LYS423 VAL424 GLU425 GLU426 LYS427 GLY428 SER429 GLU430 LYS431 ILE432 ASP433 ASN434 THR435 VAL436 THR437 LEU438 HIS439 VAL440 ASP441 ASN442 LEU443 SER444 ALA445 PRO446 SER447 ASN448 GLN449 VAL450 SER451 THR452 ALA453 LEU454 LEU455
Unit 4 ALA36 LEU37 GLU38 GLU39 ILE40 LYS41 ASN42 GLY43 THR44 ASP45 ILE46 SER47 THR48 LEU49 ASP50 ILE51 ARG52 LYS53 PHE54 ASN55 LEU56 ASN57 ILE58 ASN59 ASN60 VAL61 SER62 VAL63 LEU64 SER65 LYS66 SER67 GLN68 SER69 VAL70 ASP71 GLN72 PHE73 HIS74 LEU75 SER76 ASN77 PRO78 HIS79 TYR80 GLU81 TYR82 LEU83 SER84 GLY85 GLY86 ALA87 TYR88 PRO89 GLY90 GLU91 MET92 GLU93 ASN94 PHE95 THR96 LEU97 LYS98 VAL99 ASP100 LYS101 SER102 LYS103 LYS104 GLN105 ASP106 GLN107 VAL108 PHE109 GLU110 ASN111 PRO112 LEU113 SER114 LEU115 LYS116 PHE117 THR118 ASN119 ILE120 GLY121 THR122 VAL123 ASN124 GLY125 LYS126 GLN127 VAL128 ASP129 ALA130 TYR131 LEU132 ASN133 PHE134 ASN135 LYS136 VAL137 THR138 LEU139 HIS140 TYR141 LEU142 ASN143 THR144 ALA145 GLN146 ALA147 GLU148 SER149 GLU150 MET151 ASN152 SER153 ALA154 GLN155 LYS156 SER157 THR158 VAL159 GLU160 PHE161 PHE162 SER163 ILE164 SER165 GLU166 LEU167 TRP168 GLU169 SER170 ASN171 ALA172 PHE173 GLU174 ILE175 GLY176 ASN177 VAL178 PRO179 TYR180 VAL181 ASP182 ALA183 ASN184 HIS185 ASP186 TYR187 ILE188 MET189 ASN190 LYS191 ALA192 PHE193 TRP194 ILE195 ASP196 ALA197 ASP198 VAL199 THR200 ALA201 GLU202 ILE203 ARG204 TYR205 ALA206 ASP207 GLY208 THR209 GLU210 THR211 ASP212 LEU213 LYS214 LEU215 VAL216 MET217 LYS218 PRO219 THR220 ASP221 ILE222 ASP223 ALA224 ILE225 ASP226 ALA227 ASN228 ASN229 LEU230 LYS231 GLU232 THR233 PHE234 TYR235 VAL236 LYS237 ASN238 TYR239 GLN240 ASN241 ASP242 VAL243 ASN244 LEU245 ARG246 LEU247 MET248 ASN249 ASN250 ALA251 ASN252 VAL253 LEU254 VAL255 GLN256 GLU257 GLU258 ALA259 SER260 ASP261 ARG262 THR263 SER264 TRP265 ILE266 ALA267 THR268 GLN269 ILE270 THR271 GLY272 GLY273 SER274 TYR275 ASN276 GLU277 ASN278 ASN279 VAL280 SER281 GLY282 LEU283 ALA284 LEU285 ARG286 SER287 ASN288 SER289 ASN290 SER291 MET292 ASN293 PHE294 GLY295 TYR296 SER297 SER298 THR299 GLU300 THR301 CYS302 SER303 ALA304 VAL305 PHE306 GLY307 LEU308 TYR309 ILE310 GLU311 LYS312 ILE313 ASP314 PRO315 ARG316 PRO317 VAL318 LEU319 GLU320 VAL321 ASP322 PRO323 ALA324 GLU325 ILE326 PRO327 ALA328 LYS329 ASP330 GLY331 GLN332 ASP333 VAL334 THR335 TYR336 LYS337 ALA338 THR339 PHE340 LYS341 VAL342 PRO343 VAL344 PRO345 GLY346 LYS347 ASP348 ILE349 LEU350 ALA351 ALA352 PRO353 SER354 SER355 ILE356 GLU357 MET358 VAL359 GLN360 LYS361 PHE362 ASP363 GLU364 ARG365 LEU366 ASP367 TYR368 LYS369 GLU370 LEU371 LYS372 VAL373 GLU374 SER375 GLY376 GLY377 VAL378 THR379 LEU380 GLN381 GLU382 GLY383 ARG384 ASP385 TYR386 THR387 ILE388 GLU389 LYS390 THR391 GLY392 GLN393 THR394 VAL395 THR396 VAL397 LYS398 MET399 THR400 PRO401 GLU402 TYR403 LEU404 LYS405 GLY406 ASN407 SER408 SER409 SER410 ASP411 ILE412 ILE413 ILE414 THR415 TYR416 LYS417 THR418 ALA419 THR420 ASN421 LYS422 LYS423 VAL424 GLU425 GLU426 LYS431 ILE432 ASP433 ASN434 THR435 VAL436 THR437 LEU438 HIS439 VAL440 ASP441 ASN442 LEU443 SER444 ALA445 PRO446 SER447 ASN448 GLN449 VAL450 SER451 THR452 ALA453 LEU454 LEU455
Ligands
Unit 5 SO4501 SO4502 GOL503 ACT504 NA505
Unit 6 SO4501 SO4502 GOL503 NA504
Unit 7 SO4501 SO4502 GOL503 ACT504 NA505
Unit 8 SO4501 SO4502 GOL503 NA504
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany