4I6V - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF AN AMIDOHYDROLASE 2 FROM PLANCTOMYC LIMNOPHILUS DSM 3776
• Keywords: STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATI MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4I6V	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	AMIDOHYDROLASE 2	A	425	3386	48
2	Protein	AMIDOHYDROLASE 2	B	430	3419	56
3	Protein	AMIDOHYDROLASE 2	C	425	3390	48
4	Ligand	AMIDOHYDROLASE 2	A	5	0	21
5	Ligand	AMIDOHYDROLASE 2	B	5	0	25
6	Ligand	AMIDOHYDROLASE 2	C	5	0	25
7	Water			394	0	394
total				1689	10195	617

Proteins

Unit 1	SER 6 SER 7 PRO 8 ILE 9 ASP 10 GLN 11 LEU 12 CYS 13 ALA 14 GLN 15 LEU 16 ASP 17 GLU 18 ILE 19 VAL 20 LEU 21 ILE 22 ASP 23 PRO 24 HIS 25 SER 26 HIS 27 ILE 28 ASN 29 PRO 30 HIS 31 ALA 32 ALA 33 ALA 34 SER 35 LYS 36 ASN 37 LEU 38 GLY 39 ASP 40 ILE 41 LEU 42 GLY 43 TYR 44 HIS 45 TYR 46 PHE 47 THR 48 GLU 49 LEU 50 ALA 51 HIS 52 SER 53 ALA 54 GLY 55 MSE 56 PRO 57 ARG 58 GLU 59 VAL 60 ILE 61 GLU 62 ALA 63 PRO 64 GLY 65 ILE 66 THR 67 ALA 68 LYS 69 GLU 70 LYS 71 VAL 72 GLY 73 ARG 74 ILE 75 VAL 76 GLU 77 GLY 78 LEU 79 ALA 80 HIS 81 LEU 82 ASP 83 ASN 84 THR 85 ILE 86 GLN 87 VAL 88 LYS 89 TRP 90 LEU 91 ILE 92 GLU 93 LEU 94 CYS 95 GLU 96 ARG 97 PHE 98 PHE 99 GLY 100 PHE 101 GLN 102 ASP 103 ASP 104 ARG 105 LEU 106 THR 107 PRO 108 ASP 109 ASN 110 TRP 111 GLU 112 ALA 113 LEU 114 TYR 115 ASP 116 HIS 117 SER 118 GLU 119 LYS 120 LEU 121 MSE 122 SER 123 ALA 124 PRO 125 ASP 126 TRP 127 GLU 128 GLN 129 THR 130 VAL 131 LEU 132 GLN 133 LYS 134 SER 135 GLN 136 LEU 137 GLU 138 ALA 139 VAL 140 PHE 141 LEU 142 THR 143 ASN 144 ASP 145 PHE 146 ASP 147 ASP 148 PRO 149 LEU 150 THR 151 GLY 152 PHE 153 ASP 154 THR 155 LYS 156 LYS 157 TYR 158 ILE 159 PRO 160 CYS 161 LEU 162 ARG 163 THR 164 ASP 165 ASP 166 LEU 167 VAL 168 PHE 169 HIS 170 LEU 171 GLN 172 LYS 173 PRO 174 GLU 175 VAL 176 ARG 177 GLN 178 ARG 179 LEU 180 ALA 181 LYS 182 ALA 183 THR 184 GLY 185 PHE 186 ASP 187 CYS 188 ALA 189 THR 190 PRO 191 ALA 192 LYS 193 LEU 194 ILE 195 HIS 196 ALA 197 ILE 198 GLY 199 GLN 200 LEU 201 PHE 202 THR 203 HIS 204 PHE 205 VAL 206 SER 207 HIS 208 GLY 209 ALA 210 LYS 211 ALA 212 CYS 213 ALA 214 ILE 215 SER 216 LEU 217 PRO 218 PRO 219 ASP 220 PHE 221 GLU 222 PRO 223 THR 224 PRO 225 VAL 226 SER 227 HIS 228 VAL 229 ASP 230 ALA 231 GLU 232 GLY 233 PRO 234 LEU 235 ARG 236 ALA 237 ALA 238 TYR 239 ALA 240 GLY 241 HIS 242 VAL 243 LEU 244 THR 245 THR 246 GLU 247 GLN 248 SER 249 GLN 250 ILE 251 LEU 252 SER 253 ARG 254 PHE 255 VAL 256 PHE 257 TRP 258 THR 259 ILE 260 ALA 261 GLU 262 PHE 263 CYS 264 SER 265 GLU 266 HIS 267 HIS 268 LEU 269 PRO 270 PHE 271 ASP 272 LEU 273 MSE 274 ILE 275 GLY 276 VAL 277 ASN 278 ARG 279 ARG 280 VAL 281 TYR 282 GLU 283 SER 284 GLY 285 VAL 286 TYR 287 GLN 288 GLY 289 GLN 290 ASP 291 LEU 292 PHE 293 ASP 294 GLN 295 ARG 296 VAL 297 SER 298 LEU 299 TYR 300 GLN 301 TYR 302 ARG 303 ARG 304 LEU 305 PHE 306 ASN 307 ALA 308 PHE 309 PRO 310 ARG 311 VAL 312 LYS 313 PHE 314 PRO 315 ILE 316 SER 317 VAL 318 LEU 319 ALA 320 HIS 321 ALA 322 SER 323 ASN 324 MSE 325 GLU 326 LEU 327 VAL 328 SER 329 TYR 330 ALA 331 TRP 332 ILE 333 PHE 334 PRO 335 ASN 336 VAL 337 ILE 338 ALA 339 ASN 340 GLY 341 HIS 342 TRP 343 TRP 344 TYR 345 SER 346 ASN 347 ILE 348 PRO 349 ALA 350 PHE 351 ILE 352 GLU 353 PRO 354 ASP 355 CYS 356 ARG 357 SER 358 ARG 359 LEU 360 GLU 361 ALA 362 ILE 363 PRO 364 ARG 365 ASN 366 LYS 367 ASN 368 ILE 369 GLY 370 TYR 371 TYR 372 SER 373 ASP 374 MSE 375 TYR 376 LYS 377 LEU 378 GLU 379 PHE 380 GLY 381 TRP 382 PRO 383 LYS 384 PHE 385 GLN 386 MSE 387 TYR 388 ARG 389 ARG 390 VAL 391 LEU 392 ALA 393 LYS 394 VAL 395 LEU 396 PHE 397 GLU 398 ASP 399 PHE 400 VAL 401 VAL 402 GLY 403 ARG 404 HIS 405 TRP 406 SER 407 GLU 408 GLU 409 ARG 410 ALA 411 VAL 412 GLU 413 LEU 414 GLY 415 ARG 416 GLN 417 ILE 418 LEU 419 ARG 420 GLY 421 ASN 422 VAL 423 GLU 424 THR 425 ILE 426 PHE 427 SER 428 GLY 429 ALA 430
Unit 2	MSE 1 ILE 2 ALA 3 THR 4 LYS 5 SER 6 SER 7 PRO 8 ILE 9 ASP 10 GLN 11 LEU 12 CYS 13 ALA 14 GLN 15 LEU 16 ASP 17 GLU 18 ILE 19 VAL 20 LEU 21 ILE 22 ASP 23 PRO 24 HIS 25 SER 26 HIS 27 ILE 28 ASN 29 PRO 30 HIS 31 ALA 32 ALA 33 ALA 34 SER 35 LYS 36 ASN 37 LEU 38 GLY 39 ASP 40 ILE 41 LEU 42 GLY 43 TYR 44 HIS 45 TYR 46 PHE 47 THR 48 GLU 49 LEU 50 ALA 51 HIS 52 SER 53 ALA 54 GLY 55 MSE 56 PRO 57 ARG 58 GLU 59 VAL 60 ILE 61 GLU 62 ALA 63 PRO 64 GLY 65 ILE 66 THR 67 ALA 68 LYS 69 GLU 70 LYS 71 VAL 72 GLY 73 ARG 74 ILE 75 VAL 76 GLU 77 GLY 78 LEU 79 ALA 80 HIS 81 LEU 82 ASP 83 ASN 84 THR 85 ILE 86 GLN 87 VAL 88 LYS 89 TRP 90 LEU 91 ILE 92 GLU 93 LEU 94 CYS 95 GLU 96 ARG 97 PHE 98 PHE 99 GLY 100 PHE 101 GLN 102 ASP 103 ASP 104 ARG 105 LEU 106 THR 107 PRO 108 ASP 109 ASN 110 TRP 111 GLU 112 ALA 113 LEU 114 TYR 115 ASP 116 HIS 117 SER 118 GLU 119 LYS 120 LEU 121 MSE 122 SER 123 ALA 124 PRO 125 ASP 126 TRP 127 GLU 128 GLN 129 THR 130 VAL 131 LEU 132 GLN 133 LYS 134 SER 135 GLN 136 LEU 137 GLU 138 ALA 139 VAL 140 PHE 141 LEU 142 THR 143 ASN 144 ASP 145 PHE 146 ASP 147 ASP 148 PRO 149 LEU 150 THR 151 GLY 152 PHE 153 ASP 154 THR 155 LYS 156 LYS 157 TYR 158 ILE 159 PRO 160 CYS 161 LEU 162 ARG 163 THR 164 ASP 165 ASP 166 LEU 167 VAL 168 PHE 169 HIS 170 LEU 171 GLN 172 LYS 173 PRO 174 GLU 175 VAL 176 ARG 177 GLN 178 ARG 179 LEU 180 ALA 181 LYS 182 ALA 183 THR 184 GLY 185 PHE 186 ASP 187 CYS 188 ALA 189 THR 190 PRO 191 ALA 192 LYS 193 LEU 194 ILE 195 HIS 196 ALA 197 ILE 198 GLY 199 GLN 200 LEU 201 PHE 202 THR 203 HIS 204 PHE 205 VAL 206 SER 207 HIS 208 GLY 209 ALA 210 LYS 211 ALA 212 CYS 213 ALA 214 ILE 215 SER 216 LEU 217 PRO 218 PRO 219 ASP 220 PHE 221 GLU 222 PRO 223 THR 224 PRO 225 VAL 226 SER 227 HIS 228 VAL 229 ASP 230 ALA 231 GLU 232 GLY 233 PRO 234 LEU 235 ARG 236 ALA 237 ALA 238 TYR 239 ALA 240 GLY 241 HIS 242 VAL 243 LEU 244 THR 245 THR 246 GLU 247 GLN 248 SER 249 GLN 250 ILE 251 LEU 252 SER 253 ARG 254 PHE 255 VAL 256 PHE 257 TRP 258 THR 259 ILE 260 ALA 261 GLU 262 PHE 263 CYS 264 SER 265 GLU 266 HIS 267 HIS 268 LEU 269 PRO 270 PHE 271 ASP 272 LEU 273 MSE 274 ILE 275 GLY 276 VAL 277 ASN 278 ARG 279 ARG 280 VAL 281 TYR 282 GLU 283 SER 284 GLY 285 VAL 286 TYR 287 GLN 288 GLY 289 GLN 290 ASP 291 LEU 292 PHE 293 ASP 294 GLN 295 ARG 296 VAL 297 SER 298 LEU 299 TYR 300 GLN 301 TYR 302 ARG 303 ARG 304 LEU 305 PHE 306 ASN 307 ALA 308 PHE 309 PRO 310 ARG 311 VAL 312 LYS 313 PHE 314 PRO 315 ILE 316 SER 317 VAL 318 LEU 319 ALA 320 HIS 321 ALA 322 SER 323 ASN 324 MSE 325 GLU 326 LEU 327 VAL 328 SER 329 TYR 330 ALA 331 TRP 332 ILE 333 PHE 334 PRO 335 ASN 336 VAL 337 ILE 338 ALA 339 ASN 340 GLY 341 HIS 342 TRP 343 TRP 344 TYR 345 SER 346 ASN 347 ILE 348 PRO 349 ALA 350 PHE 351 ILE 352 GLU 353 PRO 354 ASP 355 CYS 356 ARG 357 SER 358 ARG 359 LEU 360 GLU 361 ALA 362 ILE 363 PRO 364 ARG 365 ASN 366 LYS 367 ASN 368 ILE 369 GLY 370 TYR 371 TYR 372 SER 373 ASP 374 MSE 375 TYR 376 LYS 377 LEU 378 GLU 379 PHE 380 GLY 381 TRP 382 PRO 383 LYS 384 PHE 385 GLN 386 MSE 387 TYR 388 ARG 389 ARG 390 VAL 391 LEU 392 ALA 393 LYS 394 VAL 395 LEU 396 PHE 397 GLU 398 ASP 399 PHE 400 VAL 401 VAL 402 GLY 403 ARG 404 HIS 405 TRP 406 SER 407 GLU 408 GLU 409 ARG 410 ALA 411 VAL 412 GLU 413 LEU 414 GLY 415 ARG 416 GLN 417 ILE 418 LEU 419 ARG 420 GLY 421 ASN 422 VAL 423 GLU 424 THR 425 ILE 426 PHE 427 SER 428 GLY 429 ALA 430
Unit 3	SER 6 SER 7 PRO 8 ILE 9 ASP 10 GLN 11 LEU 12 CYS 13 ALA 14 GLN 15 LEU 16 ASP 17 GLU 18 ILE 19 VAL 20 LEU 21 ILE 22 ASP 23 PRO 24 HIS 25 SER 26 HIS 27 ILE 28 ASN 29 PRO 30 HIS 31 ALA 32 ALA 33 ALA 34 SER 35 LYS 36 ASN 37 LEU 38 GLY 39 ASP 40 ILE 41 LEU 42 GLY 43 TYR 44 HIS 45 TYR 46 PHE 47 THR 48 GLU 49 LEU 50 ALA 51 HIS 52 SER 53 ALA 54 GLY 55 MSE 56 PRO 57 ARG 58 GLU 59 VAL 60 ILE 61 GLU 62 ALA 63 PRO 64 GLY 65 ILE 66 THR 67 ALA 68 LYS 69 GLU 70 LYS 71 VAL 72 GLY 73 ARG 74 ILE 75 VAL 76 GLU 77 GLY 78 LEU 79 ALA 80 HIS 81 LEU 82 ASP 83 ASN 84 THR 85 ILE 86 GLN 87 VAL 88 LYS 89 TRP 90 LEU 91 ILE 92 GLU 93 LEU 94 CYS 95 GLU 96 ARG 97 PHE 98 PHE 99 GLY 100 PHE 101 GLN 102 ASP 103 ASP 104 ARG 105 LEU 106 THR 107 PRO 108 ASP 109 ASN 110 TRP 111 GLU 112 ALA 113 LEU 114 TYR 115 ASP 116 HIS 117 SER 118 GLU 119 LYS 120 LEU 121 MSE 122 SER 123 ALA 124 PRO 125 ASP 126 TRP 127 GLU 128 GLN 129 THR 130 VAL 131 LEU 132 GLN 133 LYS 134 SER 135 GLN 136 LEU 137 GLU 138 ALA 139 VAL 140 PHE 141 LEU 142 THR 143 ASN 144 ASP 145 PHE 146 ASP 147 ASP 148 PRO 149 LEU 150 THR 151 GLY 152 PHE 153 ASP 154 THR 155 LYS 156 LYS 157 TYR 158 ILE 159 PRO 160 CYS 161 LEU 162 ARG 163 THR 164 ASP 165 ASP 166 LEU 167 VAL 168 PHE 169 HIS 170 LEU 171 GLN 172 LYS 173 PRO 174 GLU 175 VAL 176 ARG 177 GLN 178 ARG 179 LEU 180 ALA 181 LYS 182 ALA 183 THR 184 GLY 185 PHE 186 ASP 187 CYS 188 ALA 189 THR 190 PRO 191 ALA 192 LYS 193 LEU 194 ILE 195 HIS 196 ALA 197 ILE 198 GLY 199 GLN 200 LEU 201 PHE 202 THR 203 HIS 204 PHE 205 VAL 206 SER 207 HIS 208 GLY 209 ALA 210 LYS 211 ALA 212 CYS 213 ALA 214 ILE 215 SER 216 LEU 217 PRO 218 PRO 219 ASP 220 PHE 221 GLU 222 PRO 223 THR 224 PRO 225 VAL 226 SER 227 HIS 228 VAL 229 ASP 230 ALA 231 GLU 232 GLY 233 PRO 234 LEU 235 ARG 236 ALA 237 ALA 238 TYR 239 ALA 240 GLY 241 HIS 242 VAL 243 LEU 244 THR 245 THR 246 GLU 247 GLN 248 SER 249 GLN 250 ILE 251 LEU 252 SER 253 ARG 254 PHE 255 VAL 256 PHE 257 TRP 258 THR 259 ILE 260 ALA 261 GLU 262 PHE 263 CYS 264 SER 265 GLU 266 HIS 267 HIS 268 LEU 269 PRO 270 PHE 271 ASP 272 LEU 273 MSE 274 ILE 275 GLY 276 VAL 277 ASN 278 ARG 279 ARG 280 VAL 281 TYR 282 GLU 283 SER 284 GLY 285 VAL 286 TYR 287 GLN 288 GLY 289 GLN 290 ASP 291 LEU 292 PHE 293 ASP 294 GLN 295 ARG 296 VAL 297 SER 298 LEU 299 TYR 300 GLN 301 TYR 302 ARG 303 ARG 304 LEU 305 PHE 306 ASN 307 ALA 308 PHE 309 PRO 310 ARG 311 VAL 312 LYS 313 PHE 314 PRO 315 ILE 316 SER 317 VAL 318 LEU 319 ALA 320 HIS 321 ALA 322 SER 323 ASN 324 MSE 325 GLU 326 LEU 327 VAL 328 SER 329 TYR 330 ALA 331 TRP 332 ILE 333 PHE 334 PRO 335 ASN 336 VAL 337 ILE 338 ALA 339 ASN 340 GLY 341 HIS 342 TRP 343 TRP 344 TYR 345 SER 346 ASN 347 ILE 348 PRO 349 ALA 350 PHE 351 ILE 352 GLU 353 PRO 354 ASP 355 CYS 356 ARG 357 SER 358 ARG 359 LEU 360 GLU 361 ALA 362 ILE 363 PRO 364 ARG 365 ASN 366 LYS 367 ASN 368 ILE 369 GLY 370 TYR 371 TYR 372 SER 373 ASP 374 MSE 375 TYR 376 LYS 377 LEU 378 GLU 379 PHE 380 GLY 381 TRP 382 PRO 383 LYS 384 PHE 385 GLN 386 MSE 387 TYR 388 ARG 389 ARG 390 VAL 391 LEU 392 ALA 393 LYS 394 VAL 395 LEU 396 PHE 397 GLU 398 ASP 399 PHE 400 VAL 401 VAL 402 GLY 403 ARG 404 HIS 405 TRP 406 SER 407 GLU 408 GLU 409 ARG 410 ALA 411 VAL 412 GLU 413 LEU 414 GLY 415 ARG 416 GLN 417 ILE 418 LEU 419 ARG 420 GLY 421 ASN 422 VAL 423 GLU 424 THR 425 ILE 426 PHE 427 SER 428 GLY 429 ALA 430

Ligands

Unit 4	ZN 501 GOL 502 GOL 503 ACT 504 ACT 505
Unit 5	ZN 501 GOL 502 GOL 503 GOL 504 GOL 505
Unit 6	ZN 501 GOL 502 GOL 503 GOL 504 GOL 505