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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PRP8:AAR2 COMPLEX
Keywords SPLICEOSOME, U5 SNRNP, PRP8, REVERSE TRANSCRIPTASE, AAR2, ENDONUCLEASE, RNASE H, JAB1/MPN, PRE-MRNA SPLICING, SPLICIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4I43     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   A1 CISTRON-SPLICING FACTOR AAR2  A 334 2751 0
2  Protein   PRE-MRNA-SPLICING FACTOR 8  B 1407 11481 0
3 Water     670 0 670
total       2411 14232 670
Proteins
Unit 1 ASN2 THR3 VAL4 PRO5 PHE6 THR7 SER8 ALA9 PRO10 ILE11 GLU12 VAL13 THR14 ILE15 GLY16 ILE17 ASP18 GLN19 TYR20 SER21 PHE22 ASN23 VAL24 LYS25 GLU26 ASN27 GLN28 PRO29 PHE30 HIS31 GLY32 ILE33 LYS34 ASP35 ILE36 PRO37 ILE38 GLY39 HIS40 VAL41 HIS42 VAL43 ILE44 HIS45 PHE46 GLN47 HIS48 ALA49 ASP50 ASN51 SER52 SER53 MET54 ARG55 TYR56 GLY57 TYR58 TRP59 PHE60 ASP61 CYS62 ARG63 MET64 GLY65 ASN66 PHE67 TYR68 ILE69 GLN70 TYR71 ASP72 PRO73 LYS74 ASP75 GLY76 LEU77 TYR78 LYS79 MET80 MET81 GLU82 GLU83 ARG84 ASP85 GLY86 ALA87 LYS88 PHE89 GLU90 ASN91 ILE92 ARG99 GLN100 MET101 MET102 VAL103 SER104 TYR105 PRO106 LYS107 ILE108 ASP109 GLU110 ASP111 ASP112 THR113 TRP114 TYR115 ASN116 LEU117 THR118 GLU119 PHE120 VAL121 GLN122 MET123 ASP124 LYS125 ILE126 ARG127 LYS128 ILE129 VAL130 ARG131 LYS132 ASP133 GLU134 ASN135 GLN136 PHE137 SER138 TYR139 VAL140 ASP141 SER142 SER143 MET144 THR145 THR146 VAL147 GLN148 GLU149 ASN150 GLU151 LEU152 LEU153 LYS154 SER155 SER156 LEU157 GLU165 ALA166 LYS167 ASN168 GLU169 ASP170 ASP171 PRO172 ALA173 HIS174 SER175 LEU176 ASN177 TYR178 THR179 VAL180 ILE181 ASN182 PHE183 LYS184 SER185 ARG186 GLU187 ALA188 ILE189 ARG190 PRO191 GLY192 HIS193 GLU194 MET195 GLU196 ASP197 PHE198 LEU199 ASP200 LYS201 SER202 TYR203 TYR204 LEU205 ASN206 THR207 VAL208 MET209 LEU210 GLN211 GLY212 ILE213 PHE214 LYS215 ASN216 SER217 SER218 ASN219 TYR220 PHE221 GLY222 GLU223 LEU224 GLN225 PHE226 ALA227 PHE228 LEU229 ASN230 ALA231 MET232 PHE233 PHE234 GLY235 ASN236 TYR237 GLY238 SER239 SER240 LEU241 GLN242 TRP243 HIS244 ALA245 MET246 ILE247 GLU248 LEU249 ILE250 CYS251 SER252 SER253 ALA254 THR255 VAL256 PRO257 LYS258 HIS259 MET260 LEU261 ASP262 LYS263 LEU264 ASP265 GLU266 ILE267 LEU268 TYR269 TYR270 GLN271 ILE272 LYS273 THR274 LEU275 PRO276 GLU277 GLN278 TYR279 SER280 ASP281 ILE282 LEU283 LEU284 ASN285 GLU286 ARG287 VAL288 TRP289 ASN290 ILE291 CYS292 LEU293 TYR294 SER295 SER296 PHE297 GLN298 LYS299 ASN300 SER301 LEU302 HIS303 ASN304 THR305 GLU306 LYS307 ILE308 MET309 GLU310 ASN311 LYS312 TYR313 PRO314 GLU315 LEU316 LEU317 GLY318 LYS319 ASP320 ASN321 ASP323 ASP324 ALA325 LEU326 ILE327 TYR328 GLY329 ASP336 ASP337 GLU338 ASP339 ASP340 GLU341 HIS342 ASN343 PRO344 THR345 ILE346 VAL347 GLY348 GLY349 LEU350 TYR351 TYR352 GLN353 ARG354 PRO355
Unit 2 GLY882 SER883 GLY884 VAL885 MET886 VAL887 GLU888 TRP889 LEU890 GLU891 SER892 ARG893 SER894 PHE895 SER896 PRO897 ILE898 PRO899 PHE900 PRO901 PRO902 LEU903 THR904 TYR905 LYS906 ASN907 ASP908 THR909 LYS910 ILE911 LEU912 VAL913 LEU914 ALA915 LEU916 GLU917 ASP918 LEU919 LYS920 ASP921 VAL922 TYR923 ALA924 SER925 LYS926 VAL927 ARG928 LEU929 ASN930 ALA931 SER932 GLU933 ARG934 GLU935 GLU936 LEU937 ALA938 LEU939 ILE940 GLU941 GLU942 ALA943 TYR944 ASP945 ASN946 PRO947 HIS948 ASP949 THR950 LEU951 ASN952 ARG953 ILE954 LYS955 LYS956 TYR957 LEU958 LEU959 THR960 GLN961 ARG962 VAL963 PHE964 LYS965 PRO966 VAL967 ASP968 ILE969 THR970 PRO980 VAL981 TYR982 SER983 VAL984 ASP985 PRO986 LEU987 GLU988 LYS989 ILE990 THR991 ASP992 ALA993 TYR994 LEU995 ASP996 GLN997 TYR998 LEU999 TRP1000 TYR1001 GLU1002 ALA1003 ASP1004 GLN1005 ARG1006 LYS1007 LEU1008 PHE1009 PRO1010 ASN1011 TRP1012 ILE1013 LYS1014 PRO1015 SER1016 ASP1017 SER1018 GLU1019 ILE1020 PRO1021 PRO1022 LEU1023 LEU1024 VAL1025 TYR1026 LYS1027 TRP1028 THR1029 GLN1030 GLY1031 ILE1032 ASN1033 ASN1034 LEU1035 SER1036 GLU1037 ILE1038 TRP1039 ASP1040 VAL1041 SER1042 ARG1043 GLY1044 GLN1045 SER1046 ALA1047 VAL1048 LEU1049 LEU1050 GLU1051 THR1052 THR1053 LEU1054 GLY1055 GLU1056 MET1057 ALA1058 GLU1059 LYS1060 ILE1061 ASP1062 PHE1063 THR1064 LEU1065 LEU1066 ASN1067 ARG1068 LEU1069 LEU1070 ARG1071 LEU1072 ILE1073 VAL1074 ASP1075 PRO1076 ASN1077 ILE1078 ALA1079 ASP1080 TYR1081 ILE1082 THR1083 ALA1084 LYS1085 ASN1086 ASN1087 VAL1088 VAL1089 ILE1090 ASN1091 PHE1092 LYS1093 ASP1094 MET1095 SER1096 HIS1097 VAL1098 ASN1099 LYS1100 TYR1101 GLY1102 LEU1103 ILE1104 ARG1105 GLY1106 LEU1107 LYS1108 PHE1109 ALA1110 SER1111 PHE1112 ILE1113 PHE1114 GLN1115 TYR1116 TYR1117 GLY1118 LEU1119 VAL1120 ILE1121 ASP1122 LEU1123 LEU1124 LEU1125 LEU1126 GLY1127 GLN1128 GLU1129 ARG1130 ALA1131 THR1132 ASP1133 LEU1134 ALA1135 GLY1136 PRO1137 ALA1138 ASN1139 ASN1140 PRO1141 ASN1142 GLU1143 PHE1144 MET1145 GLN1146 PHE1147 LYS1148 SER1149 LYS1150 GLU1151 VAL1152 GLU1153 LYS1154 ALA1155 HIS1156 PRO1157 ILE1158 ARG1159 LEU1160 TYR1161 THR1162 ARG1163 TYR1164 LEU1165 ASP1166 ARG1167 ILE1168 TYR1169 MET1170 LEU1171 PHE1172 HIS1173 PHE1174 GLU1175 GLU1176 ASP1177 GLU1178 GLY1179 GLU1180 GLU1181 LEU1182 THR1183 ASP1184 GLU1185 TYR1186 LEU1187 ALA1188 GLU1189 ASN1190 PRO1191 ASP1192 PRO1193 ASN1194 PHE1195 GLU1196 ASN1197 SER1198 ILE1199 GLY1200 TYR1201 ASN1202 ASN1203 ARG1204 LYS1205 CYS1206 TRP1207 PRO1208 LYS1209 ASP1210 SER1211 ARG1212 MET1213 ARG1214 LEU1215 ILE1216 ARG1217 GLN1218 ASP1219 VAL1220 ASN1221 LEU1222 GLY1223 ARG1224 ALA1225 VAL1226 PHE1227 TRP1228 GLU1229 ILE1230 GLN1231 SER1232 ARG1233 VAL1234 PRO1235 THR1236 SER1237 LEU1238 THR1239 SER1240 ILE1241 LYS1242 TRP1243 GLU1244 ASN1245 ALA1246 PHE1247 VAL1248 SER1249 VAL1250 TYR1251 SER1252 LYS1253 ASN1254 ASN1255 PRO1256 ASN1257 LEU1258 LEU1259 PHE1260 SER1261 MET1262 CYS1263 GLY1264 PHE1265 GLU1266 VAL1267 ARG1268 ILE1269 LEU1270 PRO1271 ARG1272 GLN1273 ARG1274 MET1275 GLU1276 GLU1277 ASN1281 ASP1282 GLU1283 GLY1284 VAL1285 TRP1286 ASP1287 LEU1288 VAL1289 ASP1290 GLU1291 ARG1292 THR1293 LYS1294 GLN1295 ARG1296 THR1297 ALA1298 LYS1299 ALA1300 TYR1301 LEU1302 LYS1303 VAL1304 SER1305 GLU1306 GLU1307 GLU1308 ILE1309 LYS1310 LYS1311 PHE1312 ASP1313 SER1314 ARG1315 ILE1316 ARG1317 GLY1318 ILE1319 LEU1320 MET1321 ALA1322 SER1323 THR1326 THR1327 PHE1328 THR1329 LYS1330 VAL1331 ALA1332 ALA1333 LYS1334 TRP1335 ASN1336 THR1337 SER1338 LEU1339 ILE1340 SER1341 LEU1342 PHE1343 THR1344 TYR1345 PHE1346 ARG1347 GLU1348 ALA1349 ILE1350 VAL1351 ALA1352 THR1353 GLU1354 PRO1355 LEU1356 LEU1357 ASP1358 ILE1359 LEU1360 VAL1361 LYS1362 GLY1363 GLU1364 THR1365 ARG1366 ILE1367 GLN1368 ASN1369 ARG1370 VAL1371 LYS1372 LEU1373 GLY1374 LEU1375 ASN1376 SER1377 LYS1378 MET1379 PRO1380 THR1381 ARG1382 PHE1383 PRO1384 PRO1385 ALA1386 VAL1387 PHE1388 TYR1389 THR1390 PRO1391 LYS1392 GLU1393 LEU1394 GLY1395 GLY1396 LEU1397 GLY1398 MET1399 ILE1400 SER1401 ALA1402 SER1403 HIS1404 ILE1405 LEU1406 ILE1407 PRO1408 ALA1409 SER1410 ASP1411 LEU1412 SER1413 TRP1414 SER1415 LYS1416 GLN1417 THR1418 ASP1419 THR1420 GLY1421 ILE1422 THR1423 HIS1424 PHE1425 ARG1426 ALA1427 GLY1428 MET1429 THR1430 HIS1431 GLU1432 ASP1433 GLU1434 LYS1435 LEU1436 ILE1437 PRO1438 THR1439 ILE1440 PHE1441 ARG1442 TYR1443 ILE1444 THR1445 THR1446 TRP1447 GLU1448 ASN1449 GLU1450 PHE1451 LEU1452 ASP1453 SER1454 GLN1455 ARG1456 VAL1457 TRP1458 ALA1459 GLU1460 TYR1461 ALA1462 THR1463 LYS1464 ARG1465 GLN1466 GLU1467 ALA1468 ILE1469 GLN1470 GLN1471 ASN1472 ARG1473 ARG1474 LEU1475 ALA1476 PHE1477 GLU1478 GLU1479 LEU1480 GLU1481 GLY1482 SER1483 TRP1484 ASP1485 ARG1486 GLY1487 ILE1488 PRO1489 ARG1490 ILE1491 SER1492 THR1493 LEU1494 PHE1495 GLN1496 ARG1497 ASP1498 ARG1499 HIS1500 THR1501 LEU1502 ALA1503 TYR1504 ASP1505 ARG1506 GLY1507 HIS1508 ARG1509 ILE1510 ARG1511 ARG1512 GLU1513 PHE1514 LYS1515 GLN1516 TYR1517 SER1518 LEU1519 GLU1520 ARG1521 ASN1522 SER1523 PRO1524 PHE1525 TRP1526 TRP1527 THR1528 ASN1529 SER1530 HIS1531 HIS1532 ASP1533 GLY1534 LYS1535 LEU1536 TRP1537 ASN1538 LEU1539 ASN1540 ALA1541 TYR1542 ARG1543 THR1544 ASP1545 VAL1546 ILE1547 GLN1548 ALA1549 LEU1550 GLY1551 GLY1552 ILE1553 GLU1554 THR1555 ILE1556 LEU1557 GLU1558 HIS1559 THR1560 LEU1561 PHE1562 LYS1563 GLY1564 THR1565 GLY1566 PHE1567 ASN1568 SER1569 TRP1570 GLU1571 GLY1572 LEU1573 PHE1574 TRP1575 LEU1598 SER1599 GLN1600 ILE1601 PRO1602 ASN1603 ARG1604 ARG1605 PHE1606 THR1607 LEU1608 TRP1609 TRP1610 SER1611 PRO1612 THR1613 ILE1614 ASN1615 ARG1616 ALA1617 ASN1618 VAL1619 TYR1620 VAL1621 GLY1622 PHE1623 LEU1624 VAL1625 GLN1626 LEU1627 ASP1628 LEU1629 THR1630 GLY1631 ILE1632 PHE1633 LEU1634 HIS1635 GLY1636 LYS1637 ILE1638 PRO1639 THR1640 LEU1641 LYS1642 ILE1643 SER1644 LEU1645 ILE1646 GLN1647 ILE1648 PHE1649 ARG1650 ALA1651 HIS1652 LEU1653 TRP1654 GLN1655 LYS1656 ILE1657 HIS1658 GLU1659 SER1660 ILE1661 VAL1662 PHE1663 ASP1664 ILE1665 CYS1666 GLN1667 ILE1668 LEU1669 ASP1670 GLY1671 GLU1672 LEU1673 ASP1674 VAL1675 LEU1676 GLN1677 ILE1678 GLU1679 SER1680 VAL1681 THR1682 LYS1683 GLU1684 THR1685 VAL1686 HIS1687 PRO1688 ARG1689 LYS1690 SER1691 TYR1692 LYS1693 MET1694 ASN1695 SER1696 SER1697 ALA1698 ALA1699 ASP1700 ILE1701 THR1702 MET1703 GLU1704 SER1705 VAL1706 HIS1707 GLU1708 TRP1709 GLU1710 VAL1711 SER1712 LYS1713 PRO1714 SER1715 LEU1716 LEU1717 HIS1718 GLU1719 THR1720 ASN1721 ASP1722 SER1723 PHE1724 LYS1725 GLY1726 LEU1727 ILE1728 THR1729 ASN1730 LYS1731 MET1732 TRP1733 PHE1734 ASP1735 VAL1736 GLN1737 LEU1738 ARG1739 TYR1740 GLY1741 ASP1742 TYR1743 ASP1744 SER1745 HIS1746 ASP1747 ILE1748 SER1749 ARG1750 TYR1751 VAL1752 ARG1753 ALA1754 LYS1755 PHE1756 LEU1757 ASP1758 TYR1759 THR1760 THR1761 ASP1762 ASN1763 VAL1764 SER1765 MET1766 TYR1767 PRO1768 SER1769 PRO1770 THR1771 GLY1772 VAL1773 MET1774 ILE1775 GLY1776 ILE1777 ASP1778 LEU1779 ALA1780 TYR1781 ASN1782 MET1783 TYR1784 ASP1785 ALA1786 TYR1787 GLY1788 ASN1789 TRP1790 PHE1791 ASN1792 GLY1793 LEU1794 LYS1795 PRO1796 LEU1797 ILE1798 GLN1799 ASN1800 SER1801 MET1802 ARG1803 THR1804 ILE1805 MET1806 LYS1807 ALA1808 ASN1809 PRO1810 ALA1811 LEU1812 TYR1813 VAL1814 LEU1815 ARG1816 GLU1817 ARG1818 ILE1819 ARG1820 LYS1821 GLY1822 LEU1823 GLN1824 ILE1825 TYR1826 GLN1831 GLU1832 PRO1833 PHE1834 LEU1835 ASN1836 SER1837 SER1838 ASN1839 TYR1840 ALA1841 GLU1842 LEU1843 PHE1844 ASN1845 ASN1846 ASP1847 ILE1848 LYS1849 LEU1850 PHE1851 VAL1852 ASP1853 ASP1854 THR1855 ASN1856 VAL1857 TYR1858 ARG1859 VAL1860 THR1861 VAL1862 HIS1863 LYS1864 THR1865 PHE1866 GLU1867 GLY1868 ASN1869 VAL1870 ALA1871 THR1872 LYS1873 ALA1874 ILE1875 ASN1876 GLY1877 CYS1878 ILE1879 PHE1880 THR1881 LEU1882 ASN1883 PRO1884 LYS1885 THR1886 GLY1887 HIS1888 LEU1889 PHE1890 LEU1891 LYS1892 ILE1893 ILE1894 HIS1895 THR1896 SER1897 VAL1898 TRP1899 ALA1900 GLY1901 GLN1902 LYS1903 ARG1904 LEU1905 SER1906 GLN1907 LEU1908 ALA1909 LYS1910 TRP1911 LYS1912 THR1913 ALA1914 GLU1915 GLU1916 VAL1917 SER1918 ALA1919 LEU1920 VAL1921 ARG1922 SER1923 LEU1924 PRO1925 LYS1926 GLU1927 GLU1928 GLN1929 PRO1930 LYS1931 GLN1932 ILE1933 ILE1934 VAL1935 THR1936 ARG1937 LYS1938 ALA1939 MET1940 LEU1941 ASP1942 PRO1943 LEU1944 GLU1945 VAL1946 HIS1947 MET1948 LEU1949 ASP1950 PHE1951 PRO1952 ASN1953 ILE1954 ALA1955 ILE1956 ARG1957 PRO1958 THR1959 GLU1960 LEU1961 ARG1962 LEU1963 PRO1964 PHE1965 SER1966 ALA1967 ALA1968 MET1969 SER1970 ILE1971 ASP1972 LYS1973 LEU1974 SER1975 ASP1976 VAL1977 VAL1978 MET1979 LYS1980 ALA1981 THR1982 GLU1983 PRO1984 GLN1985 MET1986 VAL1987 LEU1988 PHE1989 ASN1990 ILE1991 TYR1992 ASP1993 ASP1994 TRP1995 LEU1996 ASP1997 ARG1998 ILE1999 SER2000 SER2001 TYR2002 THR2003 ALA2004 PHE2005 SER2006 ARG2007 LEU2008 THR2009 LEU2010 LEU2011 LEU2012 ARG2013 ALA2014 LEU2015 LYS2016 THR2017 ASN2018 GLU2019 GLU2020 SER2021 ALA2022 LYS2023 MET2024 ILE2025 LEU2026 LEU2027 SER2028 ASP2029 PRO2030 THR2031 ILE2032 THR2033 ILE2034 LYS2035 SER2036 TYR2037 HIS2038 LEU2039 TRP2040 PRO2041 SER2042 PHE2043 THR2044 ASP2045 GLU2046 GLN2047 TRP2048 ILE2049 THR2050 ILE2051 GLU2052 SER2053 GLN2054 MET2055 ARG2056 ASP2057 LEU2058 ILE2059 LEU2060 THR2061 GLU2062 TYR2063 GLY2064 ARG2065 LYS2066 TYR2067 ASN2068 VAL2069 ASN2070 ILE2071 SER2072 ALA2073 LEU2074 THR2075 GLN2076 THR2077 GLU2078 SER2147 SER2148 LYS2149 ASN2150 GLU2151 TRP2152 ARG2153 LYS2154 SER2155 ALA2156 ILE2157 ALA2158 ASN2159 THR2160 LEU2161 LEU2162 TYR2163 LEU2164 ARG2165 LEU2166 LYS2167 ASN2168 ILE2169 TYR2170 VAL2171 SER2172 ALA2173 ASP2174 ASP2175 PHE2176 VAL2177 GLU2178 GLU2179 GLN2180 ASN2181 VAL2182 TYR2183 VAL2184 LEU2185 PRO2186 LYS2187 ASN2188 LEU2189 LEU2190 LYS2191 LYS2192 PHE2193 ILE2194 GLU2195 ILE2196 SER2197 ASP2198 VAL2199 LYS2200 ILE2201 GLN2202 VAL2203 ALA2204 ALA2205 PHE2206 ILE2207 TYR2208 GLY2209 MET2210 SER2211 ALA2212 LYS2213 ASP2214 HIS2215 PRO2216 LYS2217 VAL2218 LYS2219 GLU2220 ILE2221 LYS2222 THR2223 VAL2224 VAL2225 LEU2226 VAL2227 PRO2228 GLN2229 LEU2230 GLY2231 HIS2232 VAL2233 GLY2234 SER2235 VAL2236 GLN2237 ILE2238 SER2239 ASN2240 ILE2241 PRO2242 ASP2243 ILE2244 GLY2245 ASP2246 LEU2247 PRO2248 ASP2249 THR2250 GLU2251 GLY2252 LEU2253 GLU2254 LEU2255 LEU2256 GLY2257 TRP2258 ILE2259 HIS2260 THR2261 GLN2262 THR2263 GLU2264 GLU2265 LEU2266 LYS2267 PHE2268 MET2269 ALA2270 ALA2271 SER2272 GLU2273 VAL2274 ALA2275 THR2276 HIS2277 SER2278 LYS2279 LEU2280 PHE2281 ALA2282 ASP2283 LYS2284 LYS2285 ARG2286 ASP2287 CYS2288 ILE2289 ASP2290 ILE2291 SER2292 ILE2293 PHE2294 SER2295 THR2296 PRO2297 GLY2298 SER2299 VAL2300 SER2301 LEU2302 SER2303 ALA2304 TYR2305 ASN2306 LEU2307 THR2308 ASP2309 GLU2310 GLY2311 TYR2312 GLN2313 TRP2314 GLY2315 GLU2316 GLU2317 ASN2318 LYS2319 ASP2320 ILE2321 MET2322 ASN2323 VAL2324 LEU2325 SER2326 GLU2327 GLY2328 PHE2329 GLU2330 PRO2331 THR2332 PHE2333 SER2334 THR2335 HIS2336 ALA2337 GLN2338 LEU2339 LEU2340 LEU2341 SER2342 ASP2343 ARG2344 ILE2345 THR2346 GLY2347 ASN2348 PHE2349 ILE2350 ILE2351 PRO2352 SER2353 GLY2354 ASN2355 VAL2356 TRP2357 ASN2358 TYR2359 THR2360 PHE2361 MET2362 GLY2363 THR2364 ALA2365 PHE2366 ASN2367 GLN2368 GLU2369 GLY2370 ASP2371 TYR2372 ASN2373 PHE2374 LYS2375 TYR2376 GLY2377 ILE2378 PRO2379 LEU2380 GLU2381 PHE2382 TYR2383 ASN2384 GLU2385 MET2386 HIS2387 ARG2388 PRO2389 VAL2390 HIS2391 PHE2392 LEU2393 GLN2394 PHE2395 SER2396
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany