4I0P - Sequence, Chains, Asymmetric and Biological Units

• Title: HLA-DO IN COMPLEX WITH HLA-DM
• Keywords: HLA-DM, HLA-DO, HLA-DR, PEPTIDE LOADING, IMMUNE SYSTEM, INHI ENZYME HLA-DM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4I0P	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HLA-DMA PROTEIN	A	188	1667	0
2	Protein		B	186	1630	0
3	Protein		C	181	1609	0
4	Protein		D	188	1704	0
5	Protein	HLA-DMA PROTEIN	E	188	1667	0
6	Protein		F	187	1638	0
7	Protein		G	181	1609	0
8	Protein		H	189	1710	0
9	Ligand	HLA-DMA PROTEIN	A	1	0	14
10	Ligand		C	1	0	14
11	Ligand		D	2	0	20
12	Ligand	HLA-DMA PROTEIN	E	1	0	14
13	Ligand		F	1	0	6
14	Ligand		G	2	0	28
15	Ligand		H	4	0	34
16	Water			6	0	6
total				1506	13234	136

Proteins

Unit 1	LEU 13 GLN 14 ASN 15 HIS 16 THR 17 PHE 18 LEU 19 HIS 20 THR 21 VAL 22 TYR 23 CYS 24 GLN 25 ASP 26 GLY 27 SER 28 PRO 29 SER 30 VAL 31 GLY 32 LEU 33 SER 34 GLU 35 ALA 36 TYR 37 ASP 38 GLU 39 ASP 40 GLN 41 LEU 42 PHE 43 PHE 44 PHE 45 ASP 46 PHE 47 SER 48 GLN 49 ASN 50 THR 51 ARG 52 VAL 53 PRO 54 ARG 55 LEU 56 PRO 57 GLU 58 PHE 59 ALA 60 ASP 61 TRP 62 ALA 63 GLN 64 GLU 65 GLN 66 GLY 67 ASP 68 ALA 69 PRO 70 ALA 71 ILE 72 LEU 73 PHE 74 ASP 75 LYS 76 GLU 77 PHE 78 CYS 79 GLU 80 TRP 81 MET 82 ILE 83 GLN 84 GLN 85 ILE 86 GLY 87 PRO 88 LYS 89 LEU 90 ASP 91 GLY 92 LYS 93 ILE 94 PRO 95 VAL 96 SER 97 ARG 98 GLY 99 PHE 100 PRO 101 ILE 102 ALA 103 GLU 104 VAL 105 PHE 106 THR 107 LEU 108 LYS 109 PRO 110 LEU 111 GLU 112 PHE 113 GLY 114 LYS 115 PRO 116 ASN 117 THR 118 LEU 119 VAL 120 CYS 121 PHE 122 VAL 123 SER 124 ASN 125 LEU 126 PHE 127 PRO 128 PRO 129 MET 130 LEU 131 THR 132 VAL 133 ASN 134 TRP 135 GLN 136 HIS 137 HIS 138 SER 139 VAL 140 PRO 141 VAL 142 GLU 143 GLY 144 PHE 145 GLY 146 PRO 147 THR 148 PHE 149 VAL 150 SER 151 ALA 152 VAL 153 ASP 154 GLY 155 LEU 156 SER 157 PHE 158 GLN 159 ALA 160 PHE 161 SER 162 TYR 163 LEU 164 ASN 165 PHE 166 THR 167 PRO 168 GLU 169 PRO 170 SER 171 ASP 172 ILE 173 PHE 174 SER 175 CYS 176 ILE 177 VAL 178 THR 179 HIS 180 GLU 181 ILE 182 ASP 183 ARG 184 TYR 185 THR 186 ALA 187 ILE 188 ALA 189 TYR 190 TRP 191 VAL 192 PRO 193 ARG 194 ASN 195 ALA 196 LEU 197 PRO 198 SER 199 ASP 200
Unit 2	PHE 3 VAL 4 ALA 5 HIS 6 VAL 7 GLU 8 SER 9 THR 10 CYS 11 LEU 12 LEU 13 ASP 14 ASP 15 ALA 16 GLY 17 THR 18 PRO 19 LYS 20 ASP 21 PHE 22 THR 23 TYR 24 CYS 25 ILE 26 SER 27 PHE 28 ASN 29 LYS 30 ASP 31 LEU 32 LEU 33 THR 34 CYS 35 TRP 36 ASP 37 PRO 38 GLU 39 GLU 40 ASN 41 LYS 42 MET 43 ALA 44 PRO 45 CYS 46 GLU 47 PHE 48 GLY 49 VAL 50 LEU 51 ASN 52 SER 53 LEU 54 ALA 55 ASN 56 VAL 57 LEU 58 SER 59 GLN 60 HIS 61 LEU 62 ASN 63 GLN 64 LYS 65 ASP 66 THR 67 LEU 68 MET 69 GLN 70 ARG 71 LEU 72 ARG 73 ASN 74 GLY 75 LEU 76 GLN 77 ASN 78 CYS 79 ALA 80 THR 81 HIS 82 THR 83 GLN 84 PRO 85 PHE 86 TRP 87 GLY 88 SER 89 LEU 90 THR 91 ASN 92 ARG 93 THR 94 ARG 95 PRO 96 PRO 97 SER 98 VAL 99 GLN 100 VAL 101 ALA 102 LYS 103 THR 104 THR 105 PRO 106 PHE 107 ASN 108 THR 109 ARG 110 GLU 111 PRO 112 VAL 113 MET 114 LEU 115 ALA 116 CYS 117 TYR 118 VAL 119 TRP 120 GLY 121 PHE 122 TYR 123 PRO 124 ALA 125 GLU 126 VAL 127 THR 128 ILE 129 THR 130 TRP 131 ARG 132 LYS 133 ASN 134 GLY 135 LYS 136 LEU 137 VAL 138 MET 139 PRO 140 HIS 141 LYS 146 THR 147 ALA 148 GLN 149 PRO 150 ASN 151 GLY 152 ASP 153 TRP 154 THR 155 TYR 156 GLN 157 THR 158 LEU 159 SER 160 HIS 161 LEU 162 ALA 163 LEU 164 THR 165 PRO 166 SER 167 TYR 168 GLY 169 ASP 170 THR 171 TYR 172 THR 173 CYS 174 VAL 175 VAL 176 GLU 177 HIS 178 ILE 179 GLY 180 ALA 181 PRO 182 GLU 183 PRO 184 ILE 185 LEU 186 ARG 187 ASP 188 TRP 189 THR 190 PRO 191 GLY 192
Unit 3	LYS 2 ALA 3 ASP 4 HIS 5 MET 6 GLY 7 SER 8 TYR 9 GLY 10 PRO 10A ALA 11 PHE 12 TYR 13 GLN 14 SER 15 TYR 16 GLY 17 ALA 18 SER 19 GLY 20 GLN 21 PHE 22 THR 23 HIS 24 GLU 25 PHE 26 ASP 27 GLU 28 GLU 29 GLN 30 LEU 31 PHE 32 SER 33 VAL 34 ASP 35 LEU 36 LYS 37 LYS 38 SER 39 GLU 40 ALA 41 VAL 42 TRP 43 ARG 44 LEU 45 PRO 46 GLU 47 PHE 48 GLY 49 ASP 50 PHE 51 ALA 52 ARG 53 PHE 54 ASP 55 PRO 56 GLN 57 GLY 58 GLY 59 LEU 60 ALA 61 GLY 62 ILE 63 ALA 64 ALA 65 ILE 66 LYS 67 ALA 68 HIS 69 LEU 70 ASP 71 ILE 72 LEU 73 VAL 74 GLU 75 ARG 76 SER 77 ASN 78 ARG 79 SER 80 ARG 81 ALA 82 ILE 83 ASN 84 VAL 85 PRO 86 PRO 87 ARG 88 VAL 89 THR 90 VAL 91 LEU 92 PRO 93 LYS 94 SER 95 ARG 96 VAL 97 GLU 98 LEU 99 GLY 100 GLN 101 PRO 102 ASN 103 ILE 104 LEU 105 ILE 106 CYS 107 ILE 108 VAL 109 ASP 110 ASN 111 ILE 112 PHE 113 PRO 114 PRO 115 VAL 116 ILE 117 ASN 118 ILE 119 THR 120 TRP 121 LEU 122 ARG 123 ASN 124 GLY 125 GLN 126 THR 127 VAL 128 THR 129 GLU 130 GLY 131 VAL 132 ALA 133 GLN 134 THR 135 SER 136 PHE 137 TYR 138 SER 139 GLN 140 PRO 141 ASP 142 HIS 143 LEU 144 PHE 145 ARG 146 LYS 147 PHE 148 HIS 149 TYR 150 LEU 151 PRO 152 PHE 153 VAL 154 PRO 155 SER 156 ALA 157 GLU 158 ASP 159 VAL 160 TYR 161 ASP 162 CYS 163 GLN 164 VAL 165 GLU 166 HIS 167 TRP 168 GLY 169 LEU 170 ASP 171 ALA 172 PRO 173 LEU 174 LEU 175 ARG 176 HIS 177 TRP 178 GLU 179 LEU 180 GLN 181
Unit 4	PRO 4 GLU 5 ASP 6 PHE 7 VAL 8 ILE 9 GLN 10 ALA 11 LYS 12 ALA 13 ASP 14 CYS 15 TYR 16 PHE 17 THR 18 ASN 19 GLY 20 THR 21 GLU 22 LYS 23 VAL 24 GLN 25 PHE 26 VAL 27 VAL 28 ARG 29 PHE 30 ILE 31 PHE 32 ASN 33 LEU 34 GLU 35 GLU 36 TYR 37 VAL 38 ARG 39 PHE 40 ASP 41 SER 42 ASP 43 VAL 44 GLY 45 MET 46 PHE 47 VAL 48 ALA 49 LEU 50 THR 51 LYS 52 LEU 53 GLY 54 GLN 55 PRO 56 ASP 57 ALA 58 GLU 59 GLN 60 TRP 61 ASN 62 SER 63 ARG 64 LEU 65 ASP 66 LEU 67 LEU 68 GLU 69 ARG 70 SER 71 ARG 72 GLN 73 ALA 74 VAL 75 ASP 76 GLY 77 VAL 78 CYS 79 ARG 80 HIS 81 ASN 82 TYR 83 ARG 84 LEU 85 GLY 86 ALA 87 PRO 88 PHE 89 THR 90 VAL 91 GLY 92 ARG 93 LYS 94 VAL 95 GLN 96 PRO 97 GLU 98 VAL 99 THR 100 VAL 101 TYR 102 PRO 103 GLU 104 ARG 105 THR 106 PRO 107 LEU 108 LEU 109 HIS 110 GLN 111 HIS 112 ASN 113 LEU 114 LEU 115 HIS 116 CYS 117 SER 118 VAL 119 THR 120 GLY 121 PHE 122 TYR 123 PRO 124 GLY 125 ASP 126 ILE 127 LYS 128 ILE 129 LYS 130 TRP 131 PHE 132 LEU 133 ASN 134 GLY 135 GLN 136 GLU 137 GLU 138 ARG 139 ALA 140 GLY 141 VAL 142 MET 143 SER 144 THR 145 GLY 146 PRO 147 ILE 148 ARG 149 ASN 150 GLY 151 ASP 152 TRP 153 THR 154 PHE 155 GLN 156 THR 157 VAL 158 VAL 159 MET 160 LEU 161 GLU 162 MET 163 THR 164 PRO 165 GLU 166 LEU 167 GLY 168 HIS 169 VAL 170 TYR 171 THR 172 CYS 173 LEU 174 VAL 175 ASP 176 HIS 177 SER 178 SER 179 LEU 180 LEU 181 SER 182 PRO 183 VAL 184 SER 185 VAL 186 GLU 187 TRP 188 ARG 189 ALA 190 GLN 191
Unit 5	LEU 13 GLN 14 ASN 15 HIS 16 THR 17 PHE 18 LEU 19 HIS 20 THR 21 VAL 22 TYR 23 CYS 24 GLN 25 ASP 26 GLY 27 SER 28 PRO 29 SER 30 VAL 31 GLY 32 LEU 33 SER 34 GLU 35 ALA 36 TYR 37 ASP 38 GLU 39 ASP 40 GLN 41 LEU 42 PHE 43 PHE 44 PHE 45 ASP 46 PHE 47 SER 48 GLN 49 ASN 50 THR 51 ARG 52 VAL 53 PRO 54 ARG 55 LEU 56 PRO 57 GLU 58 PHE 59 ALA 60 ASP 61 TRP 62 ALA 63 GLN 64 GLU 65 GLN 66 GLY 67 ASP 68 ALA 69 PRO 70 ALA 71 ILE 72 LEU 73 PHE 74 ASP 75 LYS 76 GLU 77 PHE 78 CYS 79 GLU 80 TRP 81 MET 82 ILE 83 GLN 84 GLN 85 ILE 86 GLY 87 PRO 88 LYS 89 LEU 90 ASP 91 GLY 92 LYS 93 ILE 94 PRO 95 VAL 96 SER 97 ARG 98 GLY 99 PHE 100 PRO 101 ILE 102 ALA 103 GLU 104 VAL 105 PHE 106 THR 107 LEU 108 LYS 109 PRO 110 LEU 111 GLU 112 PHE 113 GLY 114 LYS 115 PRO 116 ASN 117 THR 118 LEU 119 VAL 120 CYS 121 PHE 122 VAL 123 SER 124 ASN 125 LEU 126 PHE 127 PRO 128 PRO 129 MET 130 LEU 131 THR 132 VAL 133 ASN 134 TRP 135 GLN 136 HIS 137 HIS 138 SER 139 VAL 140 PRO 141 VAL 142 GLU 143 GLY 144 PHE 145 GLY 146 PRO 147 THR 148 PHE 149 VAL 150 SER 151 ALA 152 VAL 153 ASP 154 GLY 155 LEU 156 SER 157 PHE 158 GLN 159 ALA 160 PHE 161 SER 162 TYR 163 LEU 164 ASN 165 PHE 166 THR 167 PRO 168 GLU 169 PRO 170 SER 171 ASP 172 ILE 173 PHE 174 SER 175 CYS 176 ILE 177 VAL 178 THR 179 HIS 180 GLU 181 ILE 182 ASP 183 ARG 184 TYR 185 THR 186 ALA 187 ILE 188 ALA 189 TYR 190 TRP 191 VAL 192 PRO 193 ARG 194 ASN 195 ALA 196 LEU 197 PRO 198 SER 199 ASP 200
Unit 6	PHE 3 VAL 4 ALA 5 HIS 6 VAL 7 GLU 8 SER 9 THR 10 CYS 11 LEU 12 LEU 13 ASP 14 ASP 15 ALA 16 GLY 17 THR 18 PRO 19 LYS 20 ASP 21 PHE 22 THR 23 TYR 24 CYS 25 ILE 26 SER 27 PHE 28 ASN 29 LYS 30 ASP 31 LEU 32 LEU 33 THR 34 CYS 35 TRP 36 ASP 37 PRO 38 GLU 39 GLU 40 ASN 41 LYS 42 MET 43 ALA 44 PRO 45 CYS 46 GLU 47 PHE 48 GLY 49 VAL 50 LEU 51 ASN 52 SER 53 LEU 54 ALA 55 ASN 56 VAL 57 LEU 58 SER 59 GLN 60 HIS 61 LEU 62 ASN 63 GLN 64 LYS 65 ASP 66 THR 67 LEU 68 MET 69 GLN 70 ARG 71 LEU 72 ARG 73 ASN 74 GLY 75 LEU 76 GLN 77 ASN 78 CYS 79 ALA 80 THR 81 HIS 82 THR 83 GLN 84 PRO 85 PHE 86 TRP 87 GLY 88 SER 89 LEU 90 THR 91 ASN 92 ARG 93 THR 94 ARG 95 PRO 96 PRO 97 SER 98 VAL 99 GLN 100 VAL 101 ALA 102 LYS 103 THR 104 THR 105 PRO 106 PHE 107 ASN 108 THR 109 ARG 110 GLU 111 PRO 112 VAL 113 MET 114 LEU 115 ALA 116 CYS 117 TYR 118 VAL 119 TRP 120 GLY 121 PHE 122 TYR 123 PRO 124 ALA 125 GLU 126 VAL 127 THR 128 ILE 129 THR 130 TRP 131 ARG 132 LYS 133 ASN 134 GLY 135 LYS 136 LEU 137 VAL 138 MET 139 PRO 140 HIS 141 LYS 146 THR 147 ALA 148 GLN 149 PRO 150 ASN 151 GLY 152 ASP 153 TRP 154 THR 155 TYR 156 GLN 157 THR 158 LEU 159 SER 160 HIS 161 LEU 162 ALA 163 LEU 164 THR 165 PRO 166 SER 167 TYR 168 GLY 169 ASP 170 THR 171 TYR 172 THR 173 CYS 174 VAL 175 VAL 176 GLU 177 HIS 178 ILE 179 GLY 180 ALA 181 PRO 182 GLU 183 PRO 184 ILE 185 LEU 186 ARG 187 ASP 188 TRP 189 THR 190 PRO 191 GLY 192 LEU 193
Unit 7	LYS 2 ALA 3 ASP 4 HIS 5 MET 6 GLY 7 SER 8 TYR 9 GLY 10 PRO 10A ALA 11 PHE 12 TYR 13 GLN 14 SER 15 TYR 16 GLY 17 ALA 18 SER 19 GLY 20 GLN 21 PHE 22 THR 23 HIS 24 GLU 25 PHE 26 ASP 27 GLU 28 GLU 29 GLN 30 LEU 31 PHE 32 SER 33 VAL 34 ASP 35 LEU 36 LYS 37 LYS 38 SER 39 GLU 40 ALA 41 VAL 42 TRP 43 ARG 44 LEU 45 PRO 46 GLU 47 PHE 48 GLY 49 ASP 50 PHE 51 ALA 52 ARG 53 PHE 54 ASP 55 PRO 56 GLN 57 GLY 58 GLY 59 LEU 60 ALA 61 GLY 62 ILE 63 ALA 64 ALA 65 ILE 66 LYS 67 ALA 68 HIS 69 LEU 70 ASP 71 ILE 72 LEU 73 VAL 74 GLU 75 ARG 76 SER 77 ASN 78 ARG 79 SER 80 ARG 81 ALA 82 ILE 83 ASN 84 VAL 85 PRO 86 PRO 87 ARG 88 VAL 89 THR 90 VAL 91 LEU 92 PRO 93 LYS 94 SER 95 ARG 96 VAL 97 GLU 98 LEU 99 GLY 100 GLN 101 PRO 102 ASN 103 ILE 104 LEU 105 ILE 106 CYS 107 ILE 108 VAL 109 ASP 110 ASN 111 ILE 112 PHE 113 PRO 114 PRO 115 VAL 116 ILE 117 ASN 118 ILE 119 THR 120 TRP 121 LEU 122 ARG 123 ASN 124 GLY 125 GLN 126 THR 127 VAL 128 THR 129 GLU 130 GLY 131 VAL 132 ALA 133 GLN 134 THR 135 SER 136 PHE 137 TYR 138 SER 139 GLN 140 PRO 141 ASP 142 HIS 143 LEU 144 PHE 145 ARG 146 LYS 147 PHE 148 HIS 149 TYR 150 LEU 151 PRO 152 PHE 153 VAL 154 PRO 155 SER 156 ALA 157 GLU 158 ASP 159 VAL 160 TYR 161 ASP 162 CYS 163 GLN 164 VAL 165 GLU 166 HIS 167 TRP 168 GLY 169 LEU 170 ASP 171 ALA 172 PRO 173 LEU 174 LEU 175 ARG 176 HIS 177 TRP 178 GLU 179 LEU 180 GLN 181
Unit 8	PRO 4 GLU 5 ASP 6 PHE 7 VAL 8 ILE 9 GLN 10 ALA 11 LYS 12 ALA 13 ASP 14 CYS 15 TYR 16 PHE 17 THR 18 ASN 19 GLY 20 THR 21 GLU 22 LYS 23 VAL 24 GLN 25 PHE 26 VAL 27 VAL 28 ARG 29 PHE 30 ILE 31 PHE 32 ASN 33 LEU 34 GLU 35 GLU 36 TYR 37 VAL 38 ARG 39 PHE 40 ASP 41 SER 42 ASP 43 VAL 44 GLY 45 MET 46 PHE 47 VAL 48 ALA 49 LEU 50 THR 51 LYS 52 LEU 53 GLY 54 GLN 55 PRO 56 ASP 57 ALA 58 GLU 59 GLN 60 TRP 61 ASN 62 SER 63 ARG 64 LEU 65 ASP 66 LEU 67 LEU 68 GLU 69 ARG 70 SER 71 ARG 72 GLN 73 ALA 74 VAL 75 ASP 76 GLY 77 VAL 78 CYS 79 ARG 80 HIS 81 ASN 82 TYR 83 ARG 84 LEU 85 GLY 86 ALA 87 PRO 88 PHE 89 THR 90 VAL 91 GLY 92 ARG 93 LYS 94 VAL 95 GLN 96 PRO 97 GLU 98 VAL 99 THR 100 VAL 101 TYR 102 PRO 103 GLU 104 ARG 105 THR 106 PRO 107 LEU 108 LEU 109 HIS 110 GLN 111 HIS 112 ASN 113 LEU 114 LEU 115 HIS 116 CYS 117 SER 118 VAL 119 THR 120 GLY 121 PHE 122 TYR 123 PRO 124 GLY 125 ASP 126 ILE 127 LYS 128 ILE 129 LYS 130 TRP 131 PHE 132 LEU 133 ASN 134 GLY 135 GLN 136 GLU 137 GLU 138 ARG 139 ALA 140 GLY 141 VAL 142 MET 143 SER 144 THR 145 GLY 146 PRO 147 ILE 148 ARG 149 ASN 150 GLY 151 ASP 152 TRP 153 THR 154 PHE 155 GLN 156 THR 157 VAL 158 VAL 159 MET 160 LEU 161 GLU 162 MET 163 THR 164 PRO 165 GLU 166 LEU 167 GLY 168 HIS 169 VAL 170 TYR 171 THR 172 CYS 173 LEU 174 VAL 175 ASP 176 HIS 177 SER 178 SER 179 LEU 180 LEU 181 SER 182 PRO 183 VAL 184 SER 185 VAL 186 GLU 187 TRP 188 ARG 189 ALA 190 GLN 191 SER 192

Ligands

Unit 9	NAG 301
Unit 10	NAG 201
Unit 11	NAG 201 GOL 202
Unit 12	NAG 301
Unit 13	GOL 201
Unit 14	NAG 201 NAG 202
Unit 15	NAG 201 PGE 202 ACT 203 GOL 204