Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN IFIT5 WITH 5`-TRIPHOS OLIGOCYTIDINE
Keywords TPR, RNA BINDING, ANTIVIRAL, RNA, RNA BINDING PROTEIN-RNA CO
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4HOR     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE 5  A 482 3937 0
2  DNA/RNA    X 5 64 29
3  Ligand   RNA (5'-R(*(CTP)P*CP*CP*CP*C)-3')  X 1 0 1
4 Water     425 0 425
total       913 4001 455

Proteins
Unit 1 MET1 SER2 GLU3 ILE4 ARG5 LYS6 ASP7 THR8 LEU9 LYS10 ALA11 ILE12 LEU13 LEU14 GLU15 LEU16 GLU17 CYS18 HIS19 PHE20 THR21 TRP22 ASN23 LEU24 LEU25 LYS26 GLU27 ASP28 ILE29 ASP30 LEU31 PHE32 GLU33 VAL34 GLU35 ASP36 THR37 ILE38 GLY39 GLN40 GLN41 LEU42 GLU43 PHE44 LEU45 THR46 THR47 LYS48 SER49 ARG50 LEU51 ALA52 LEU53 TYR54 ASN55 LEU56 LEU57 ALA58 TYR59 VAL60 LYS61 HIS62 LEU63 LYS64 GLY65 GLN66 ASN67 LYS68 ASP69 ALA70 LEU71 GLU72 CYS73 LEU74 GLU75 GLN76 ALA77 GLU78 GLU79 ILE80 ILE81 GLN82 GLN83 GLU84 HIS85 SER86 ASP87 LYS88 GLU89 GLU90 VAL91 ARG92 SER93 LEU94 VAL95 THR96 TRP97 GLY98 ASN99 TYR100 ALA101 TRP102 VAL103 TYR104 TYR105 HIS106 MET107 ASP108 GLN109 LEU110 GLU111 GLU112 ALA113 GLN114 LYS115 TYR116 THR117 GLY118 LYS119 ILE120 GLY121 ASN122 VAL123 CYS124 LYS125 LYS126 LEU127 SER128 SER129 PRO130 SER131 ASN132 TYR133 LYS134 LEU135 GLU136 CYS137 PRO138 GLU139 THR140 ASP141 CYS142 GLU143 LYS144 GLY145 TRP146 ALA147 LEU148 LEU149 LYS150 PHE151 GLY152 GLY153 LYS154 TYR155 TYR156 GLN157 LYS158 ALA159 LYS160 ALA161 ALA162 PHE163 GLU164 LYS165 ALA166 LEU167 GLU168 VAL169 GLU170 PRO171 ASP172 ASN173 PRO174 GLU175 PHE176 ASN177 ILE178 GLY179 TYR180 ALA181 ILE182 THR183 VAL184 TYR185 ARG186 LEU187 ASP188 ASP189 SER190 ASP191 ARG192 GLU193 GLY194 SER195 VAL196 LYS197 SER198 PHE199 SER200 LEU201 GLY202 PRO203 LEU204 ARG205 LYS206 ALA207 VAL208 THR209 LEU210 ASN211 PRO212 ASP213 ASN214 SER215 TYR216 ILE217 LYS218 VAL219 PHE220 LEU221 ALA222 LEU223 LYS224 LEU225 GLN226 ASP227 VAL228 HIS229 ALA230 GLU231 ALA232 GLU233 GLY234 GLU235 LYS236 TYR237 ILE238 GLU239 GLU240 ILE241 LEU242 ASP243 GLN244 ILE245 SER246 SER247 GLN248 PRO249 TYR250 VAL251 LEU252 ARG253 TYR254 ALA255 ALA256 LYS257 PHE258 TYR259 ARG260 ARG261 LYS262 ASN263 SER264 TRP265 ASN266 LYS267 ALA268 LEU269 GLU270 LEU271 LEU272 LYS273 LYS274 ALA275 LEU276 GLU277 VAL278 THR279 PRO280 THR281 SER282 SER283 PHE284 LEU285 HIS286 HIS287 GLN288 MET289 GLY290 LEU291 CYS292 TYR293 ARG294 ALA295 GLN296 MET297 ILE298 GLN299 ILE300 LYS301 LYS302 ALA303 THR304 HIS305 ASN306 ARG307 PRO308 LYS309 GLY310 LYS311 ASP312 LYS313 LEU314 LYS315 VAL316 ASP317 GLU318 LEU319 ILE320 SER321 SER322 ALA323 ILE324 PHE325 HIS326 PHE327 LYS328 ALA329 ALA330 MET331 GLU332 ARG333 ASP334 SER335 MET336 PHE337 ALA338 PHE339 ALA340 TYR341 THR342 ASP343 LEU344 ALA345 ASN346 MET347 TYR348 ALA349 GLU350 GLY351 GLY352 GLN353 TYR354 SER355 ASN356 ALA357 GLU358 ASP359 ILE360 PHE361 ARG362 LYS363 ALA364 LEU365 ARG366 LEU367 GLU368 ASN369 ILE370 THR371 ASP372 ASP373 HIS374 LYS375 HIS376 GLN377 ILE378 HIS379 TYR380 HIS381 TYR382 GLY383 ARG384 PHE385 GLN386 GLU387 PHE388 HIS389 ARG390 LYS391 SER392 GLU393 ASN394 THR395 ALA396 ILE397 HIS398 HIS399 TYR400 LEU401 GLU402 ALA403 LEU404 LYS405 VAL406 LYS407 ASP408 ARG409 SER410 PRO411 LEU412 ARG413 THR414 LYS415 LEU416 THR417 SER418 ALA419 LEU420 LYS421 LYS422 LEU423 SER424 THR425 LYS426 ARG427 LEU428 CYS429 HIS430 ASN431 ALA432 LEU433 ASP434 VAL435 GLN436 SER437 LEU438 SER439 ALA440 LEU441 GLY442 PHE443 VAL444 TYR445 LYS446 LEU447 GLU448 GLY449 GLU450 LYS451 ARG452 GLN453 ALA454 ALA455 GLU456 TYR457 TYR458 GLU459 LYS460 ALA461 GLN462 LYS463 ILE464 ASP465 PRO466 GLU467 ASN468 ALA469 GLU470 PHE471 LEU472 THR473 ALA474 LEU475 CYS476 GLU477 LEU478 ARG479 LEU480 SER481 ILE482

Nucleic acids
Unit 2 CTP1 C2 C3 C4 C5

Ligands
Unit 3 MG101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany