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Title | THE COMPLEX CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF V THE ONCOGENIC KSHV WITH DNA | |
Keywords | HELIX-TURN-HELIX, DNA BINDING PROTEIN-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4HLY | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | K9 | A | 106 | 867 | 0 |
2 | Protein | K9 | B | 106 | 867 | 0 |
3 | Other macromolecule | 5'-D(*GP*CP*GP*TP*CP*GP*AP*GP*AP*CP*GP*C)-3' | C | 12 | 245 | 0 |
4 | Other macromolecule | 5'-D(*GP*CP*GP*TP*CP*GP*AP*GP*AP*CP*GP*C)-3' | D | 12 | 245 | 0 |
5 | Water | 232 | 0 | 232 | ||
total | 468 | 2224 | 232 |
Unit 1 | LYS3 ALA4 SER5 ILE6 LYS7 ASP8 TRP9 ILE10 VAL11 CYS12 GLN13 VAL14 ASN15 SER16 GLY17 LYS18 PHE19 PRO20 GLY21 VAL22 GLU23 TRP24 GLU25 ASP26 GLU27 GLU28 ARG29 THR30 ARG31 PHE32 ARG33 ILE34 PRO35 VAL36 THR37 PRO38 LEU39 ALA40 ASP41 PRO42 CYS43 PHE44 GLU45 TRP46 ARG47 ARG48 ASP49 GLY50 GLU51 LEU52 GLY53 VAL54 VAL55 TYR56 ILE57 ARG58 GLU59 ARG60 GLY61 ASN62 MET63 PRO64 VAL65 ASP66 ALA67 SER68 PHE69 LYS70 GLY71 THR72 ARG73 GLY74 ARG75 ARG76 ARG77 MET78 LEU79 ALA80 ALA81 LEU82 ARG83 ARG84 THR85 ARG86 GLY87 LEU88 GLN89 GLU90 ILE91 GLY92 LYS93 GLY94 ILE95 SER96 GLN97 ASP98 GLY99 HIS100 HIS101 PHE102 LEU103 VAL104 PHE105 ARG106 VAL107 ARG108 |
Unit 2 | LYS3 ALA4 SER5 ILE6 LYS7 ASP8 TRP9 ILE10 VAL11 CYS12 GLN13 VAL14 ASN15 SER16 GLY17 LYS18 PHE19 PRO20 GLY21 VAL22 GLU23 TRP24 GLU25 ASP26 GLU27 GLU28 ARG29 THR30 ARG31 PHE32 ARG33 ILE34 PRO35 VAL36 THR37 PRO38 LEU39 ALA40 ASP41 PRO42 CYS43 PHE44 GLU45 TRP46 ARG47 ARG48 ASP49 GLY50 GLU51 LEU52 GLY53 VAL54 VAL55 TYR56 ILE57 ARG58 GLU59 ARG60 GLY61 ASN62 MET63 PRO64 VAL65 ASP66 ALA67 SER68 PHE69 LYS70 GLY71 THR72 ARG73 GLY74 ARG75 ARG76 ARG77 MET78 LEU79 ALA80 ALA81 LEU82 ARG83 ARG84 THR85 ARG86 GLY87 LEU88 GLN89 GLU90 ILE91 GLY92 LYS93 GLY94 ILE95 SER96 GLN97 ASP98 GLY99 HIS100 HIS101 PHE102 LEU103 VAL104 PHE105 ARG106 VAL107 ARG108 |
Unit 3 | DG1 DC2 DG3 DT4 DC5 DG6 DA7 DG8 DA9 DC10 DG11 DC12 |
Unit 4 | DG1 DC2 DG3 DT4 DC5 DG6 DA7 DG8 DA9 DC10 DG11 DC12 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |