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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CORDYCEPS MILITARIS IDCASE IN APO FORM
Keywords PYRIMIDINE METABOLISM, DNA DECARBOXYLATION, IDCASE, DECARBOX URACIL, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4HK5     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   URACIL-5-CARBOXYLATE DECARBOXYLASE  A 358 2742 0
2  Protein   URACIL-5-CARBOXYLATE DECARBOXYLASE  B 362 2781 0
3  Protein   URACIL-5-CARBOXYLATE DECARBOXYLASE  C 370 2826 0
4  Protein   URACIL-5-CARBOXYLATE DECARBOXYLASE  D 380 2917 0
5  Ligand   URACIL-5-CARBOXYLATE DECARBOXYLASE  A 1 0 1
6  Ligand   URACIL-5-CARBOXYLATE DECARBOXYLASE  B 1 0 1
7  Ligand   URACIL-5-CARBOXYLATE DECARBOXYLASE  C 1 0 1
8  Ligand   URACIL-5-CARBOXYLATE DECARBOXYLASE  D 2 0 2
9 Water     931 0 931
total       2406 11266 936
Proteins
Unit 1 PRO6 VAL7 VAL8 VAL9 ASP10 ILE11 HIS12 THR13 HIS14 MET15 TYR16 PRO17 PRO18 SER19 TYR20 ILE21 ALA22 MET23 LEU24 GLU25 LYS26 ARG27 GLN28 THR29 ILE30 PRO31 LEU32 VAL33 ARG34 THR35 PHE36 PRO42 ARG43 LEU44 ILE45 LEU46 LEU47 SER48 SER49 GLU50 LEU51 ALA52 ALA53 LEU54 ASP55 ALA56 ALA57 LEU58 LEU65 PRO66 GLY67 ARG68 PRO69 LEU70 SER71 THR72 HIS73 PHE74 ALA75 SER76 LEU77 ALA78 GLN79 LYS80 MET81 HIS82 PHE83 MET84 ASP85 THR86 ASN87 GLY88 ILE89 ARG90 VAL91 SER92 VAL93 ILE94 SER95 LEU96 ALA97 ASN98 PRO99 TRP100 PHE101 ASP102 PHE103 LEU104 ALA105 PRO106 ASP107 GLU108 ALA109 PRO110 GLY111 ILE112 ALA113 ASP114 ALA115 VAL116 ASN117 ALA118 GLU119 PHE120 SER121 ASP122 MET123 CYS124 ALA125 GLN126 HIS127 VAL128 GLY129 ARG130 LEU131 PHE132 PHE133 PHE134 ALA135 ALA136 LEU137 PRO138 LEU139 SER140 ALA141 PRO142 VAL143 ASP144 ALA145 VAL146 LYS147 ALA148 SER149 ILE150 GLU151 ARG152 VAL153 LYS154 ASN155 LEU156 LYS157 TYR158 CYS159 ARG160 GLY161 ILE162 ILE163 LEU164 GLY165 THR166 SER167 GLY168 LEU169 GLY170 LYS171 GLY172 LEU173 ASP174 ASP175 PRO176 HIS177 LEU178 LEU179 PRO180 VAL181 PHE182 GLU183 ALA184 VAL185 ALA186 ASP187 ALA188 LYS189 LEU190 LEU191 VAL192 PHE193 LEU194 HIS195 PRO196 HIS197 TYR198 GLY199 LEU200 PRO201 ASN202 GLU203 VAL204 TYR205 GLY206 PRO207 ARG208 SER209 GLU210 GLU211 TYR212 GLY213 HIS214 VAL215 LEU216 PRO217 LEU218 ALA219 LEU220 GLY221 PHE222 PRO223 MET224 GLU225 THR226 THR227 ILE228 ALA229 VAL230 ALA231 ARG232 MET233 TYR234 MET235 ALA236 GLY237 VAL238 PHE239 ASP240 HIS241 VAL242 ARG243 ASN244 LEU245 GLN246 MET247 LEU248 LEU249 ALA250 HIS251 SER252 GLY253 GLY254 THR255 LEU256 PRO257 PHE258 LEU259 ALA260 GLY261 ARG262 ILE263 GLU264 SER265 CYS266 ILE267 VAL268 HIS269 ASP270 GLY271 HIS272 LEU273 VAL274 LYS275 THR276 GLY277 LYS278 VAL279 PRO280 LYS281 ASP282 ARG283 ARG284 THR285 ILE286 TRP287 THR288 VAL289 LEU290 LYS291 GLU292 GLN293 ILE294 TYR295 LEU296 ASP297 ALA298 VAL299 ILE300 TYR301 SER302 GLU303 VAL304 GLY305 LEU306 GLN307 ALA308 ALA309 ILE310 ALA311 SER312 SER313 GLY314 ALA315 ASP316 ARG317 LEU318 MET319 PHE320 GLY321 THR322 ASP323 HIS324 PRO325 PHE326 PHE327 PRO328 PRO329 ILE330 GLU331 GLU332 ASP333 VAL334 GLN335 GLY336 PRO337 TRP338 ASP339 SER340 SER341 ARG342 LEU343 ASN344 ALA345 GLN346 ALA347 VAL348 ILE349 LYS350 ALA351 VAL352 GLY353 GLU354 GLY355 SER356 SER357 ASP358 ALA359 ALA360 ALA361 VAL362 MET363 GLY364 LEU365 ASN366 ALA367 VAL368 ARG369 VAL370 LEU371 SER372 LEU373 LYS374
Unit 2 PRO6 VAL7 VAL8 VAL9 ASP10 ILE11 HIS12 THR13 HIS14 MET15 TYR16 PRO17 PRO18 SER19 TYR20 ILE21 ALA22 MET23 LEU24 GLU25 LYS26 ARG27 GLN28 THR29 ILE30 PRO31 LEU32 VAL33 PRO42 ARG43 LEU44 ILE45 LEU46 LEU47 SER48 SER49 GLU50 LEU51 ALA52 ALA53 LEU54 ASP55 ALA56 LEU65 PRO66 GLY67 ARG68 PRO69 LEU70 SER71 THR72 HIS73 PHE74 ALA75 SER76 LEU77 ALA78 GLN79 LYS80 MET81 HIS82 PHE83 MET84 ASP85 THR86 ASN87 GLY88 ILE89 ARG90 VAL91 SER92 VAL93 ILE94 SER95 LEU96 ALA97 ASN98 PRO99 TRP100 PHE101 ASP102 PHE103 LEU104 ALA105 PRO106 ASP107 GLU108 ALA109 PRO110 GLY111 ILE112 ALA113 ASP114 ALA115 VAL116 ASN117 ALA118 GLU119 PHE120 SER121 ASP122 MET123 CYS124 ALA125 GLN126 HIS127 VAL128 GLY129 ARG130 LEU131 PHE132 PHE133 PHE134 ALA135 ALA136 LEU137 PRO138 LEU139 SER140 ALA141 PRO142 VAL143 ASP144 ALA145 VAL146 LYS147 ALA148 SER149 ILE150 GLU151 ARG152 VAL153 LYS154 ASN155 LEU156 LYS157 TYR158 CYS159 ARG160 GLY161 ILE162 ILE163 LEU164 GLY165 THR166 SER167 GLY168 LEU169 GLY170 LYS171 GLY172 LEU173 ASP174 ASP175 PRO176 HIS177 LEU178 LEU179 PRO180 VAL181 PHE182 GLU183 ALA184 VAL185 ALA186 ASP187 ALA188 LYS189 LEU190 LEU191 VAL192 PHE193 LEU194 HIS195 PRO196 HIS197 TYR198 GLY199 LEU200 PRO201 ASN202 GLU203 VAL204 TYR205 GLY206 PRO207 ARG208 SER209 GLU210 GLU211 TYR212 GLY213 HIS214 VAL215 LEU216 PRO217 LEU218 ALA219 LEU220 GLY221 PHE222 PRO223 MET224 GLU225 THR226 THR227 ILE228 ALA229 VAL230 ALA231 ARG232 MET233 TYR234 MET235 ALA236 GLY237 VAL238 PHE239 ASP240 HIS241 VAL242 ARG243 ASN244 LEU245 GLN246 MET247 LEU248 LEU249 ALA250 HIS251 SER252 GLY253 GLY254 THR255 LEU256 PRO257 PHE258 LEU259 ALA260 GLY261 ARG262 ILE263 GLU264 SER265 CYS266 ILE267 VAL268 HIS269 ASP270 GLY271 HIS272 LEU273 VAL274 LYS275 THR276 GLY277 LYS278 VAL279 PRO280 LYS281 ASP282 ARG283 ARG284 THR285 ILE286 TRP287 THR288 VAL289 LEU290 LYS291 GLU292 GLN293 ILE294 TYR295 LEU296 ASP297 ALA298 VAL299 ILE300 TYR301 SER302 GLU303 VAL304 GLY305 LEU306 GLN307 ALA308 ALA309 ILE310 ALA311 SER312 SER313 GLY314 ALA315 ASP316 ARG317 LEU318 MET319 PHE320 GLY321 THR322 ASP323 HIS324 PRO325 PHE326 PHE327 PRO328 PRO329 ILE330 GLU331 GLU332 ASP333 VAL334 GLN335 GLY336 PRO337 TRP338 ASP339 SER340 SER341 ARG342 LEU343 ASN344 ALA345 GLN346 ALA347 VAL348 ILE349 LYS350 ALA351 VAL352 GLY353 GLU354 GLY355 SER356 SER357 ASP358 ALA359 ALA360 ALA361 VAL362 MET363 GLY364 LEU365 ASN366 ALA367 VAL368 ARG369 VAL370 LEU371 SER372 LEU373 LYS374 ALA375 GLU376 LEU377 GLU378 HIS379 HIS380 HIS381 HIS382 HIS383
Unit 3 THR5 PRO6 VAL7 VAL8 VAL9 ASP10 ILE11 HIS12 THR13 HIS14 MET15 TYR16 PRO17 PRO18 SER19 TYR20 ILE21 ALA22 MET23 LEU24 GLU25 LYS26 ARG27 GLN28 THR29 ILE30 PRO31 LEU32 VAL33 ARG34 THR35 PHE36 PRO37 GLN38 ALA39 ASP40 GLU41 PRO42 ARG43 LEU44 ILE45 LEU46 LEU47 SER48 SER49 GLU50 LEU51 ALA52 ALA53 LEU54 ASP55 ALA56 ALA57 LEU58 ALA59 ASP60 PRO61 ALA62 ALA63 LYS64 LEU65 PRO66 GLY67 ARG68 PRO69 LEU70 SER71 THR72 HIS73 PHE74 ALA75 SER76 LEU77 ALA78 GLN79 LYS80 MET81 HIS82 PHE83 MET84 ASP85 THR86 ASN87 GLY88 ILE89 ARG90 VAL91 SER92 VAL93 ILE94 SER95 LEU96 ALA97 ASN98 PRO99 TRP100 PHE101 ASP102 PHE103 LEU104 ALA105 PRO106 ASP107 GLU108 ALA109 PRO110 GLY111 ILE112 ALA113 ASP114 ALA115 VAL116 ASN117 ALA118 GLU119 PHE120 SER121 ASP122 MET123 CYS124 ALA125 GLN126 HIS127 VAL128 GLY129 ARG130 LEU131 PHE132 PHE133 PHE134 ALA135 ALA136 LEU137 PRO138 LEU139 SER140 ALA141 PRO142 VAL143 ASP144 ALA145 VAL146 LYS147 ALA148 SER149 ILE150 GLU151 ARG152 VAL153 LYS154 ASN155 LEU156 LYS157 TYR158 CYS159 ARG160 GLY161 ILE162 ILE163 LEU164 GLY165 THR166 SER167 GLY168 LEU169 GLY170 LYS171 GLY172 LEU173 ASP174 ASP175 PRO176 HIS177 LEU178 LEU179 PRO180 VAL181 PHE182 GLU183 ALA184 VAL185 ALA186 ASP187 ALA188 LYS189 LEU190 LEU191 VAL192 PHE193 LEU194 HIS195 PRO196 HIS197 TYR198 GLY199 LEU200 PRO201 ASN202 GLU203 VAL204 TYR205 GLY206 PRO207 ARG208 SER209 GLU210 GLU211 TYR212 GLY213 HIS214 VAL215 LEU216 PRO217 LEU218 ALA219 LEU220 GLY221 PHE222 PRO223 MET224 GLU225 THR226 THR227 ILE228 ALA229 VAL230 ALA231 ARG232 MET233 TYR234 MET235 ALA236 GLY237 VAL238 PHE239 ASP240 HIS241 VAL242 ARG243 ASN244 LEU245 GLN246 MET247 LEU248 LEU249 ALA250 HIS251 SER252 GLY253 GLY254 THR255 LEU256 PRO257 PHE258 LEU259 ALA260 GLY261 ARG262 ILE263 GLU264 SER265 CYS266 ILE267 VAL268 HIS269 ASP270 GLY271 HIS272 LEU273 VAL274 LYS275 THR276 GLY277 LYS278 VAL279 PRO280 LYS281 ASP282 ARG283 ARG284 THR285 ILE286 TRP287 THR288 VAL289 LEU290 LYS291 GLU292 GLN293 ILE294 TYR295 LEU296 ASP297 ALA298 VAL299 ILE300 TYR301 SER302 GLU303 VAL304 GLY305 LEU306 GLN307 ALA308 ALA309 ILE310 ALA311 SER312 SER313 GLY314 ALA315 ASP316 ARG317 LEU318 MET319 PHE320 GLY321 THR322 ASP323 HIS324 PRO325 PHE326 PHE327 PRO328 PRO329 ILE330 GLU331 GLU332 ASP333 VAL334 GLN335 GLY336 PRO337 TRP338 ASP339 SER340 SER341 ARG342 LEU343 ASN344 ALA345 GLN346 ALA347 VAL348 ILE349 LYS350 ALA351 VAL352 GLY353 GLU354 GLY355 SER356 SER357 ASP358 ALA359 ALA360 ALA361 VAL362 MET363 GLY364 LEU365 ASN366 ALA367 VAL368 ARG369 VAL370 LEU371 SER372 LEU373 LYS374
Unit 4 THR5 PRO6 VAL7 VAL8 VAL9 ASP10 ILE11 HIS12 THR13 HIS14 MET15 TYR16 PRO17 PRO18 SER19 TYR20 ILE21 ALA22 MET23 LEU24 GLU25 LYS26 ARG27 GLN28 THR29 ILE30 PRO31 LEU32 VAL33 ARG34 THR35 PHE36 PRO37 GLN38 ALA39 ASP40 GLU41 PRO42 ARG43 LEU44 ILE45 LEU46 LEU47 SER48 SER49 GLU50 LEU51 ALA52 ALA53 LEU54 ASP55 ALA56 ALA57 LEU58 ALA59 ASP60 PRO61 ALA62 ALA63 LYS64 LEU65 PRO66 GLY67 ARG68 PRO69 LEU70 SER71 THR72 HIS73 PHE74 ALA75 SER76 LEU77 ALA78 GLN79 LYS80 MET81 HIS82 PHE83 MET84 ASP85 THR86 ASN87 GLY88 ILE89 ARG90 VAL91 SER92 VAL93 ILE94 SER95 LEU96 ALA97 ASN98 PRO99 TRP100 PHE101 ASP102 PHE103 LEU104 ALA105 PRO106 ASP107 GLU108 ALA109 PRO110 GLY111 ILE112 ALA113 ASP114 ALA115 VAL116 ASN117 ALA118 GLU119 PHE120 SER121 ASP122 MET123 CYS124 ALA125 GLN126 HIS127 VAL128 GLY129 ARG130 LEU131 PHE132 PHE133 PHE134 ALA135 ALA136 LEU137 PRO138 LEU139 SER140 ALA141 PRO142 VAL143 ASP144 ALA145 VAL146 LYS147 ALA148 SER149 ILE150 GLU151 ARG152 VAL153 LYS154 ASN155 LEU156 LYS157 TYR158 CYS159 ARG160 GLY161 ILE162 ILE163 LEU164 GLY165 THR166 SER167 GLY168 LEU169 GLY170 LYS171 GLY172 LEU173 ASP174 ASP175 PRO176 HIS177 LEU178 LEU179 PRO180 VAL181 PHE182 GLU183 ALA184 VAL185 ALA186 ASP187 ALA188 LYS189 LEU190 LEU191 VAL192 PHE193 LEU194 HIS195 PRO196 HIS197 TYR198 GLY199 LEU200 PRO201 ASN202 GLU203 VAL204 TYR205 GLY206 PRO207 ARG208 SER209 GLU210 GLU211 TYR212 GLY213 HIS214 VAL215 LEU216 PRO217 LEU218 ALA219 LEU220 GLY221 PHE222 PRO223 MET224 GLU225 THR226 THR227 ILE228 ALA229 VAL230 ALA231 ARG232 MET233 TYR234 MET235 ALA236 GLY237 VAL238 PHE239 ASP240 HIS241 VAL242 ARG243 ASN244 LEU245 GLN246 MET247 LEU248 LEU249 ALA250 HIS251 SER252 GLY253 GLY254 THR255 LEU256 PRO257 PHE258 LEU259 ALA260 GLY261 ARG262 ILE263 GLU264 SER265 CYS266 ILE267 VAL268 HIS269 ASP270 GLY271 HIS272 LEU273 VAL274 LYS275 THR276 GLY277 LYS278 VAL279 PRO280 LYS281 ASP282 ARG283 ARG284 THR285 ILE286 TRP287 THR288 VAL289 LEU290 LYS291 GLU292 GLN293 ILE294 TYR295 LEU296 ASP297 ALA298 VAL299 ILE300 TYR301 SER302 GLU303 VAL304 GLY305 LEU306 GLN307 ALA308 ALA309 ILE310 ALA311 SER312 SER313 GLY314 ALA315 ASP316 ARG317 LEU318 MET319 PHE320 GLY321 THR322 ASP323 HIS324 PRO325 PHE326 PHE327 PRO328 PRO329 ILE330 GLU331 GLU332 ASP333 VAL334 GLN335 GLY336 PRO337 TRP338 ASP339 SER340 SER341 ARG342 LEU343 ASN344 ALA345 GLN346 ALA347 VAL348 ILE349 LYS350 ALA351 VAL352 GLY353 GLU354 GLY355 SER356 SER357 ASP358 ALA359 ALA360 ALA361 VAL362 MET363 GLY364 LEU365 ASN366 ALA367 VAL368 ARG369 VAL370 LEU371 SER372 LEU373 LYS374 ALA375 GLU376 LEU377 GLU378 HIS379 HIS380 HIS381 HIS382 HIS383 HIS384
Ligands
Unit 5 ZN401
Unit 6 ZN401
Unit 7 ZN401
Unit 8 ZN401 ZN402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany