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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PARP CATALYTIC DOMAIN IN COMPLEX WITH N INHIBITORS
Keywords POLYMERASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4HHZ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLY [ADP-RIBOSE] POLYMERASE 1  A 349 2744 0
2  Protein   POLY [ADP-RIBOSE] POLYMERASE 1  B 350 2748 0
3  Protein   POLY [ADP-RIBOSE] POLYMERASE 1  C 350 2748 0
4  Protein   POLY [ADP-RIBOSE] POLYMERASE 1  D 296 2334 0
5  Ligand   POLY [ADP-RIBOSE] POLYMERASE 1  A 2 0 40
6  Ligand   POLY [ADP-RIBOSE] POLYMERASE 1  B 2 0 40
7  Ligand   POLY [ADP-RIBOSE] POLYMERASE 1  C 1 0 35
8  Ligand   POLY [ADP-RIBOSE] POLYMERASE 1  D 2 0 40
9 Water     24 0 24
total       1376 10574 179
Proteins
Unit 1 LYS1 SER2 LYS3 LEU4 PRO5 LYS6 PRO7 VAL8 GLN9 ASP10 LEU11 ILE12 LYS13 MET14 ILE15 PHE16 ASP17 VAL18 GLU19 SER20 MET21 LYS22 LYS23 ALA24 MET25 VAL26 GLU27 TYR28 GLU29 ILE30 ASP31 LEU32 GLN33 LYS34 MET35 PRO36 LEU37 GLY38 LYS39 LEU40 SER41 LYS42 ARG43 GLN44 ILE45 GLN46 ALA47 ALA48 TYR49 SER50 ILE51 LEU52 SER53 GLU54 VAL55 GLN56 GLN57 ALA58 VAL59 SER60 GLN61 GLY62 SER63 SER64 ASP65 SER66 GLN67 ILE68 LEU69 ASP70 LEU71 SER72 ASN73 ARG74 PHE75 TYR76 THR77 LEU78 ILE79 PRO80 HIS81 ASP82 PHE83 GLY84 MET85 LYS86 LYS87 PRO88 PRO89 LEU90 LEU91 ASN92 ASN93 ALA94 ASP95 SER96 VAL97 GLN98 ALA99 LYS100 ALA101 GLU102 MET103 LEU104 ASP105 ASN106 LEU107 LEU108 ASP109 ILE110 GLU111 VAL112 ALA113 TYR114 SER115 LEU116 LEU117 ARG118 GLY119 GLY120 SER121 ASP122 ASP123 SER124 SER125 LYS126 ASP127 PRO128 ILE129 ASP130 VAL131 ASN132 TYR133 GLU134 LYS135 LEU136 LYS137 THR138 ASP139 ILE140 LYS141 VAL142 VAL143 ASP144 ARG145 ASP146 SER147 GLU148 GLU149 ALA150 GLU151 ILE152 ILE153 ARG154 LYS155 TYR156 VAL157 LYS158 ASN159 THR160 HIS161 ALA162 THR163 THR164 HIS165 ASN166 ALA167 TYR168 ASP169 LEU170 GLU171 VAL172 ILE173 ASP174 ILE175 PHE176 LYS177 ILE178 GLU179 ARG180 GLU181 GLY182 GLU183 CYS184 GLN185 ARG186 TYR187 LYS188 PRO189 PHE190 LYS191 GLN192 LEU193 HIS194 ASN195 ARG196 ARG197 LEU198 LEU199 TRP200 HIS201 GLY202 SER203 ARG204 THR205 THR206 ASN207 PHE208 ALA209 GLY210 ILE211 LEU212 SER213 GLN214 GLY215 LEU216 ARG217 ILE218 ALA219 PRO220 PRO221 GLU222 ALA223 PRO224 VAL225 THR226 GLY227 TYR228 MET229 PHE230 GLY231 LYS232 GLY233 ILE234 TYR235 PHE236 ALA237 ASP238 MET239 VAL240 SER241 LYS242 SER243 ALA244 ASN245 TYR246 CYS247 HIS248 THR249 SER250 GLN251 GLY252 ASP253 PRO254 ILE255 GLY256 LEU257 ILE258 LEU259 LEU260 GLY261 GLU262 VAL263 ALA264 LEU265 GLY266 ASN267 MET268 TYR269 GLU270 LEU271 LYS272 HIS273 ALA274 SER275 HIS276 ILE277 SER278 LYS279 LEU280 PRO281 LYS282 GLY283 LYS284 HIS285 SER286 VAL287 LYS288 GLY289 LEU290 GLY291 LYS292 THR293 THR294 PRO295 ASP296 PRO297 SER298 ALA299 ASN300 ILE301 SER302 LEU303 ASP304 GLY305 VAL306 ASP307 VAL308 PRO309 LEU310 GLY311 THR312 GLY313 ILE314 SER315 SER316 GLY317 VAL318 ASN319 ASP320 THR321 SER322 LEU323 LEU324 TYR325 ASN326 GLU327 TYR328 ILE329 VAL330 TYR331 ASP332 ILE333 ALA334 GLN335 VAL336 ASN337 LEU338 LYS339 TYR340 LEU341 LEU342 LYS343 LEU344 LYS345 PHE346 ASN347 PHE348 LYS349
Unit 2 LYS1 SER2 LYS3 LEU4 PRO5 LYS6 PRO7 VAL8 GLN9 ASP10 LEU11 ILE12 LYS13 MET14 ILE15 PHE16 ASP17 VAL18 GLU19 SER20 MET21 LYS22 LYS23 ALA24 MET25 VAL26 GLU27 TYR28 GLU29 ILE30 ASP31 LEU32 GLN33 LYS34 MET35 PRO36 LEU37 GLY38 LYS39 LEU40 SER41 LYS42 ARG43 GLN44 ILE45 GLN46 ALA47 ALA48 TYR49 SER50 ILE51 LEU52 SER53 GLU54 VAL55 GLN56 GLN57 ALA58 VAL59 SER60 GLN61 GLY62 SER63 SER64 ASP65 SER66 GLN67 ILE68 LEU69 ASP70 LEU71 SER72 ASN73 ARG74 PHE75 TYR76 THR77 LEU78 ILE79 PRO80 HIS81 ASP82 PHE83 GLY84 MET85 LYS86 LYS87 PRO88 PRO89 LEU90 LEU91 ASN92 ASN93 ALA94 ASP95 SER96 VAL97 GLN98 ALA99 LYS100 ALA101 GLU102 MET103 LEU104 ASP105 ASN106 LEU107 LEU108 ASP109 ILE110 GLU111 VAL112 ALA113 TYR114 SER115 LEU116 LEU117 ARG118 GLY119 GLY120 SER121 ASP122 ASP123 SER124 SER125 LYS126 ASP127 PRO128 ILE129 ASP130 VAL131 ASN132 TYR133 GLU134 LYS135 LEU136 LYS137 THR138 ASP139 ILE140 LYS141 VAL142 VAL143 ASP144 ARG145 ASP146 SER147 GLU148 GLU149 ALA150 GLU151 ILE152 ILE153 ARG154 LYS155 TYR156 VAL157 LYS158 ASN159 THR160 HIS161 ALA162 THR163 THR164 HIS165 ASN166 ALA167 TYR168 ASP169 LEU170 GLU171 VAL172 ILE173 ASP174 ILE175 PHE176 LYS177 ILE178 GLU179 ARG180 GLU181 GLY182 GLU183 CYS184 GLN185 ARG186 TYR187 LYS188 PRO189 PHE190 LYS191 GLN192 LEU193 HIS194 ASN195 ARG196 ARG197 LEU198 LEU199 TRP200 HIS201 GLY202 SER203 ARG204 THR205 THR206 ASN207 PHE208 ALA209 GLY210 ILE211 LEU212 SER213 GLN214 GLY215 LEU216 ARG217 ILE218 ALA219 PRO220 PRO221 GLU222 ALA223 PRO224 VAL225 THR226 GLY227 TYR228 MET229 PHE230 GLY231 LYS232 GLY233 ILE234 TYR235 PHE236 ALA237 ASP238 MET239 VAL240 SER241 LYS242 SER243 ALA244 ASN245 TYR246 CYS247 HIS248 THR249 SER250 GLN251 GLY252 ASP253 PRO254 ILE255 GLY256 LEU257 ILE258 LEU259 LEU260 GLY261 GLU262 VAL263 ALA264 LEU265 GLY266 ASN267 MET268 TYR269 GLU270 LEU271 LYS272 HIS273 ALA274 SER275 HIS276 ILE277 SER278 LYS279 LEU280 PRO281 LYS282 GLY283 LYS284 HIS285 SER286 VAL287 LYS288 GLY289 LEU290 GLY291 LYS292 THR293 THR294 PRO295 ASP296 PRO297 SER298 ALA299 ASN300 ILE301 SER302 LEU303 ASP304 GLY305 VAL306 ASP307 VAL308 PRO309 LEU310 GLY311 THR312 GLY313 ILE314 SER315 SER316 GLY317 VAL318 ASN319 ASP320 THR321 SER322 LEU323 LEU324 TYR325 ASN326 GLU327 TYR328 ILE329 VAL330 TYR331 ASP332 ILE333 ALA334 GLN335 VAL336 ASN337 LEU338 LYS339 TYR340 LEU341 LEU342 LYS343 LEU344 LYS345 PHE346 ASN347 PHE348 LYS349 THR350
Unit 3 LYS1 SER2 LYS3 LEU4 PRO5 LYS6 PRO7 VAL8 GLN9 ASP10 LEU11 ILE12 LYS13 MET14 ILE15 PHE16 ASP17 VAL18 GLU19 SER20 MET21 LYS22 LYS23 ALA24 MET25 VAL26 GLU27 TYR28 GLU29 ILE30 ASP31 LEU32 GLN33 LYS34 MET35 PRO36 LEU37 GLY38 LYS39 LEU40 SER41 LYS42 ARG43 GLN44 ILE45 GLN46 ALA47 ALA48 TYR49 SER50 ILE51 LEU52 SER53 GLU54 VAL55 GLN56 GLN57 ALA58 VAL59 SER60 GLN61 GLY62 SER63 SER64 ASP65 SER66 GLN67 ILE68 LEU69 ASP70 LEU71 SER72 ASN73 ARG74 PHE75 TYR76 THR77 LEU78 ILE79 PRO80 HIS81 ASP82 PHE83 GLY84 MET85 LYS86 LYS87 PRO88 PRO89 LEU90 LEU91 ASN92 ASN93 ALA94 ASP95 SER96 VAL97 GLN98 ALA99 LYS100 ALA101 GLU102 MET103 LEU104 ASP105 ASN106 LEU107 LEU108 ASP109 ILE110 GLU111 VAL112 ALA113 TYR114 SER115 LEU116 LEU117 ARG118 GLY119 GLY120 SER121 ASP122 ASP123 SER124 SER125 LYS126 ASP127 PRO128 ILE129 ASP130 VAL131 ASN132 TYR133 GLU134 LYS135 LEU136 LYS137 THR138 ASP139 ILE140 LYS141 VAL142 VAL143 ASP144 ARG145 ASP146 SER147 GLU148 GLU149 ALA150 GLU151 ILE152 ILE153 ARG154 LYS155 TYR156 VAL157 LYS158 ASN159 THR160 HIS161 ALA162 THR163 THR164 HIS165 ASN166 ALA167 TYR168 ASP169 LEU170 GLU171 VAL172 ILE173 ASP174 ILE175 PHE176 LYS177 ILE178 GLU179 ARG180 GLU181 GLY182 GLU183 CYS184 GLN185 ARG186 TYR187 LYS188 PRO189 PHE190 LYS191 GLN192 LEU193 HIS194 ASN195 ARG196 ARG197 LEU198 LEU199 TRP200 HIS201 GLY202 SER203 ARG204 THR205 THR206 ASN207 PHE208 ALA209 GLY210 ILE211 LEU212 SER213 GLN214 GLY215 LEU216 ARG217 ILE218 ALA219 PRO220 PRO221 GLU222 ALA223 PRO224 VAL225 THR226 GLY227 TYR228 MET229 PHE230 GLY231 LYS232 GLY233 ILE234 TYR235 PHE236 ALA237 ASP238 MET239 VAL240 SER241 LYS242 SER243 ALA244 ASN245 TYR246 CYS247 HIS248 THR249 SER250 GLN251 GLY252 ASP253 PRO254 ILE255 GLY256 LEU257 ILE258 LEU259 LEU260 GLY261 GLU262 VAL263 ALA264 LEU265 GLY266 ASN267 MET268 TYR269 GLU270 LEU271 LYS272 HIS273 ALA274 SER275 HIS276 ILE277 SER278 LYS279 LEU280 PRO281 LYS282 GLY283 LYS284 HIS285 SER286 VAL287 LYS288 GLY289 LEU290 GLY291 LYS292 THR293 THR294 PRO295 ASP296 PRO297 SER298 ALA299 ASN300 ILE301 SER302 LEU303 ASP304 GLY305 VAL306 ASP307 VAL308 PRO309 LEU310 GLY311 THR312 GLY313 ILE314 SER315 SER316 GLY317 VAL318 ASN319 ASP320 THR321 SER322 LEU323 LEU324 TYR325 ASN326 GLU327 TYR328 ILE329 VAL330 TYR331 ASP332 ILE333 ALA334 GLN335 VAL336 ASN337 LEU338 LYS339 TYR340 LEU341 LEU342 LYS343 LEU344 LYS345 PHE346 ASN347 PHE348 LYS349 THR350
Unit 4 SER2 LYS3 LEU4 PRO5 LYS6 PRO7 VAL8 GLN9 ASP10 LEU11 ILE12 LYS13 MET14 ILE15 PHE16 ASP17 VAL18 GLU19 SER20 MET21 LYS22 LYS23 ALA24 MET25 VAL26 GLU27 TYR28 GLU29 ILE30 LYS39 LEU40 SER41 LYS42 ARG43 GLN44 ILE45 GLN46 ALA47 ALA48 SER72 ASN73 ARG74 PHE75 TYR76 THR77 LEU78 ILE79 PRO80 HIS81 ASP82 ASP95 SER96 VAL97 GLN98 ALA99 LYS100 ALA101 GLU102 MET103 LEU104 ASP105 ASN106 LEU107 LEU108 ASP109 ILE110 GLU111 VAL112 ALA113 TYR114 SER115 LEU116 LEU117 ARG118 GLY119 ILE129 ASP130 VAL131 ASN132 TYR133 GLU134 LYS135 LEU136 LYS137 THR138 ASP139 ILE140 LYS141 VAL142 VAL143 ASP144 ARG145 ASP146 SER147 GLU148 GLU149 ALA150 GLU151 ILE152 ILE153 ARG154 LYS155 TYR156 VAL157 LYS158 ASN159 THR160 HIS161 ALA162 THR163 THR164 HIS165 ASN166 ALA167 TYR168 ASP169 LEU170 GLU171 VAL172 ILE173 ASP174 ILE175 PHE176 LYS177 ILE178 GLU179 ARG180 GLU181 GLY182 GLU183 CYS184 GLN185 ARG186 TYR187 LYS188 PRO189 PHE190 LYS191 GLN192 LEU193 HIS194 ASN195 ARG196 ARG197 LEU198 LEU199 TRP200 HIS201 GLY202 SER203 ARG204 THR205 THR206 ASN207 PHE208 ALA209 GLY210 ILE211 LEU212 SER213 GLN214 GLY215 LEU216 ARG217 ILE218 ALA219 PRO220 PRO221 GLU222 ALA223 PRO224 VAL225 THR226 GLY227 TYR228 MET229 PHE230 GLY231 LYS232 GLY233 ILE234 TYR235 PHE236 ALA237 ASP238 MET239 VAL240 SER241 LYS242 SER243 ALA244 ASN245 TYR246 CYS247 HIS248 THR249 SER250 GLN251 GLY252 ASP253 PRO254 ILE255 GLY256 LEU257 ILE258 LEU259 LEU260 GLY261 GLU262 VAL263 ALA264 LEU265 GLY266 ASN267 MET268 TYR269 GLU270 LEU271 LYS272 HIS273 ALA274 SER275 HIS276 ILE277 SER278 LYS279 LEU280 PRO281 LYS282 GLY283 LYS284 HIS285 SER286 VAL287 LYS288 GLY289 LEU290 GLY291 LYS292 THR293 THR294 PRO295 ASP296 PRO297 SER298 ALA299 ASN300 ILE301 SER302 LEU303 ASP304 GLY305 VAL306 ASP307 VAL308 PRO309 LEU310 GLY311 THR312 GLY313 ILE314 SER315 SER316 GLY317 VAL318 ASN319 ASP320 THR321 SER322 LEU323 LEU324 TYR325 ASN326 GLU327 TYR328 ILE329 VAL330 TYR331 ASP332 ILE333 ALA334 GLN335 VAL336 ASN337 LEU338 LYS339 TYR340 LEU341 LEU342 LYS343 LEU344 LYS345 PHE346 ASN347 PHE348 LYS349
Ligands
Unit 5 15S401 SO4402
Unit 6 15S401 SO4402
Unit 7 15S401
Unit 8 15S401 SO4402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany