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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FAB 8F8 IN COMPLEX A H2N2 INFLUENZA VIR HEMAGGLUTININ
Keywords VIRAL PROTEIN/IMMUNE SYSTEM, HEMAGGLUTININ, ANTIBODY, VIRAL BINDING, ANTIGEN BINDING, SIALIC ACID, VIRAL PROTEIN-IMMUNE COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4HF5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HEMAGGLUTININ HA1  A 324 2534 0
2  Protein   HEMAGGLUTININ HA2  B 172 1396 0
3  Protein   FAB 8F8 HEAVY CHAIN  H 153 1195 0
4  Protein   FAB 8F8 LIGHT CHAIN  L 196 1436 0
5  Ligand    C 4 0 50
6  Ligand    D 2 0 28
total       851 6561 78

Proteins
Unit 1 PRO9 GLY10 ASP11 GLN12 ILE13 CYS14 ILE15 GLY16 TYR17 HIS18 ALA19 ASN20 ASN21 SER22 THR23 GLU24 LYS25 VAL26 ASP27 THR28 ILE29 LEU30 GLU31 ARG32 ASN33 VAL34 THR35 VAL36 THR37 HIS38 ALA39 LYS40 ASP41 ILE42 LEU43 GLU44 LYS45 THR46 HIS47 ASN48 GLY49 LYS50 LEU51 CYS52 LYS53 LEU53A ASN54 GLY55 ILE56 PRO57 PRO58 LEU59 GLU60 LEU61 GLY62 ASP63 CYS64 SER65 ILE66 ALA67 GLY68 TRP69 LEU70 LEU71 GLY72 ASN73 PRO74 GLU75 CYS76 ASP77 ARG78 LEU79 LEU80 SER81 VAL81A PRO82 GLU83 TRP84 SER85 TYR86 ILE87 MET88 GLU89 LYS90 GLU91 ASN92 PRO93 ARG94 ASP95 GLY95A LEU96 CYS97 TYR98 PRO99 GLY100 SER101 PHE102 ASN103 ASP104 TYR105 GLU106 GLU107 LEU108 LYS109 HIS110 LEU111 LEU112 SER113 SER114 VAL115 LYS116 HIS116A PHE116B GLU116C LYS117 VAL118 LYS119 ILE120 LEU121 PRO122 LYS123 ASP125 ARG126 TRP127 THR128 GLN129 HIS130 THR131 THR132 THR133 GLY134 GLY135 SER136 ARG137 ALA138 CYS139 ALA140 VAL141 SER142 GLY143 ASN144 PRO145 SER146 PHE147 PHE148 ARG149 ASN150 MET151 VAL152 TRP153 LEU154 THR155 GLU156 LYS157 GLY158 SER159 ASN160 TYR161 PRO162 VAL163 ALA164 LYS165 GLY166 SER167 TYR168 ASN169 ASN170 THR171 SER172 GLY173 GLU174 GLN175 MET176 LEU177 ILE178 ILE179 TRP180 GLY181 VAL182 HIS183 HIS184 PRO185 ASN186 ASP187 GLU188 THR189 GLU190 GLN191 ARG192 THR193 LEU194 TYR195 GLN196 ASN197 VAL198 GLY199 THR200 TYR201 VAL202 SER203 VAL204 GLY205 THR206 SER207 THR208 LEU209 ASN210 LYS211 ARG212 SER213 THR214 PRO215 GLU216 ILE217 ALA218 THR219 ARG220 PRO221 LYS222 VAL223 ASN224 GLY225 GLN226 GLY227 GLY228 ARG229 MET230 GLU231 PHE232 SER233 TRP234 THR235 LEU236 LEU237 ASP238 MET239 TRP240 ASP241 THR242 ILE243 ASN244 PHE245 GLU246 SER247 THR248 GLY249 ASN250 LEU251 ILE252 ALA253 PRO254 GLU255 TYR256 GLY257 PHE258 LYS259 ILE260 SER261 LYS262 ARG263 GLY263A SER264 SER265 GLY266 ILE267 MET268 LYS269 THR270 GLU271 GLY272 THR273 LEU274 GLU275 ASN276 CYS277 GLU278 THR279 LYS280 CYS281 GLN282 THR283 PRO284 LEU285 GLY286 ALA287 ILE288 ASN289 THR290 THR291 LEU292 PRO293 PHE294 HIS295 ASN296 VAL297 HIS298 PRO299 LEU300 THR301 ILE302 GLY303 GLU304 CYS305 PRO306 LYS307 TYR308 VAL309 LYS310 SER311 GLU312 LYS313 LEU314 VAL315 LEU316 ALA317 THR318 GLY319 LEU320 ARG321 ASN322 VAL323 PRO324 GLN325 ILE326
Unit 2 GLY1 LEU2 PHE3 GLY4 ALA5 ILE6 ALA7 GLY8 PHE9 ILE10 GLU11 GLY12 GLY13 TRP14 GLN15 GLY16 MET17 VAL18 ASP19 GLY20 TRP21 TYR22 GLY23 TYR24 HIS25 HIS26 SER27 ASN28 ASP29 GLN30 GLY31 SER32 GLY33 TYR34 ALA35 ALA36 ASP37 LYS38 GLU39 SER40 THR41 GLN42 LYS43 ALA44 PHE45 ASP46 GLY47 ILE48 THR49 ASN50 LYS51 VAL52 ASN53 SER54 VAL55 ILE56 GLU57 LYS58 MET59 ASN60 THR61 GLN62 PHE63 GLU64 ALA65 VAL66 GLY67 LYS68 GLU69 PHE70 SER71 ASN72 LEU73 GLU74 ARG75 ARG76 LEU77 GLU78 ASN79 LEU80 ASN81 LYS82 LYS83 MET84 GLU85 ASP86 GLY87 PHE88 LEU89 ASP90 VAL91 TRP92 THR93 TYR94 ASN95 ALA96 GLU97 LEU98 LEU99 VAL100 LEU101 MET102 GLU103 ASN104 GLU105 ARG106 THR107 LEU108 ASP109 PHE110 HIS111 ASP112 SER113 ASN114 VAL115 LYS116 ASN117 LEU118 TYR119 ASP120 LYS121 VAL122 ARG123 MET124 GLN125 LEU126 ARG127 ASP128 ASN129 VAL130 LYS131 GLU132 LEU133 GLY134 ASN135 GLY136 CYS137 PHE138 GLU139 PHE140 TYR141 HIS142 LYS143 CYS144 ASP145 ASP146 GLU147 CYS148 MET149 ASN150 SER151 VAL152 LYS153 ASN154 GLY155 THR156 TYR157 ASP158 TYR159 PRO160 LYS161 TYR162 GLU163 GLU164 GLU165 SER166 LYS167 LEU168 ASN169 ARG170 ASN171 GLU172
Unit 3 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 VAL11 VAL12 GLN13 PRO14 GLY15 ARG16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 MET28 PHE29 SER30 SER31 TYR32 VAL33 MET34 HIS35 TRP36 VAL37 ARG38 GLN39 PRO40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 ALA49 VAL50 ILE51 TRP52 TYR52A ASP53 GLY54 SER55 LYS56 THR57 TYR58 PHE59 ALA60 ASP61 SER62 MET63 ARG64 GLY65 ARG66 LEU67 THR68 VAL69 SER70 ARG71 ASP72 ASN73 SER74 LYS75 ASN76 ALA77 LEU78 TYR79 LEU80 GLN81 MET82 ASN82A ARG82B LEU82C ARG83 ALA84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ARG94 GLN95 GLN96 ASP97 SER98 GLY99 TYR100 SER100A GLY100B PRO100C GLU100D VAL100E SER100F TYR100G TYR100H SER100I HIS100J TYR100K GLY100L MET100M ASP101 VAL102 TRP103 GLY104 GLN105 GLY106 THR107 MET108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178
Unit 4 VAL3 LEU4 THR5 GLN6 SER7 PRO8 SER9 ALA11 SER12 GLY13 THR14 PRO15 GLY16 GLN17 ALA18 ILE19 THR20 ILE21 SER22 CYS23 SER24 GLY25 SER26 SER27 SER27A ASN27B ILE28 GLY29 SER30 ASN31 PRO32 VAL33 ASN34 TRP35 TYR36 GLN37 GLN38 LEU39 PRO40 GLY41 ALA42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ALA50 ASP51 GLU52 HIS53 ARG54 PRO55 SER56 GLY57 VAL58 PRO59 ASP60 ARG61 PHE62 SER63 GLY64 SER65 LYS66 SER67 GLY68 THR69 SER70 ALA71 SER72 LEU73 ALA74 ILE75 SER76 GLY77 LEU78 GLN79 SER80 GLU81 ASP82 GLU83 ALA84 ASP85 TYR86 TYR87 CYS88 ALA89 ALA90 TRP91 ASP92 ASP93 SER94 LEU95 SER95A GLY95B PRO95C ALA95D VAL96 VAL97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 THR105 VAL106 LEU106A GLY107 GLN108 PRO109 LYS110 ALA111 ALA112 PRO113 SER114 VAL115 THR116 LEU117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLU124 LEU125 GLN126 LEU132 VAL133 CYS134 LEU135 ILE136 SER137 ASP138 PHE139 TYR140 PRO141 GLY142 ALA143 VAL144 THR145 VAL146 GLY158 VAL159 GLU160 THR161 THR162 THR163 PRO164 SER165 LYS166 GLN167 SER168 ASN169 ASN170 LYS171 TYR172 ALA173 ALA174 SER175 SER176 TYR177 LEU178 SER179 LEU180 THR181 PRO182 GLU183 GLN184 TRP185 LYS186 SER187 HIS188 ARG189 SER190 TYR191 SER192 CYS193 GLN194 VAL195 THR196 HIS197 GLU198 GLY199 SER200 THR201 VAL202 GLU203 LYS204 THR205 VAL206 ALA207 PRO208

Ligands
Unit 5 NAG1 NAG2 BMA3 MAN4
Unit 6 NAG1 NAG2

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany