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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF VIRAL RDRP IN COMPLEX WITH GTP
Keywords DNA/RNA POLYMERASES, RNA DEPENDENT RNA POLYMERASE, GTP, TRAN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4HDG     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLYPROTEIN  A 612 4924 0
2  Protein   POLYPROTEIN  B 612 4914 0
3  Ligand   POLYPROTEIN  A 3 0 34
4  Ligand   POLYPROTEIN  B 3 0 34
5 Water     455 0 455
total       1685 9838 523
Proteins
Unit 1 SER274 ASN275 GLN276 GLU277 LYS278 ILE279 LYS280 LYS281 ARG282 ILE283 GLN284 LYS285 LEU286 LYS287 GLU288 GLU289 PHE290 ALA291 THR292 THR293 TRP294 HIS295 LYS296 ASP297 PRO298 GLU299 HIS300 PRO301 TYR302 ARG303 THR304 TRP305 THR306 TYR307 HIS308 GLY309 SER310 TYR311 GLU312 VAL313 LYS314 ALA315 THR316 GLY317 LEU322 VAL323 ASN324 GLY325 VAL326 VAL327 LYS328 LEU329 MET330 SER331 LYS332 PRO333 TRP334 ASP335 ALA336 ILE337 ALA338 ASN339 VAL340 THR341 THR342 MET343 ALA344 MET345 THR346 ASP347 THR348 THR349 PRO350 PHE351 GLY352 GLN353 GLN354 ARG355 VAL356 PHE357 LYS358 GLU359 LYS360 VAL361 ASP362 THR363 LYS364 ALA365 PRO366 GLU367 PRO368 PRO369 ALA370 GLY371 VAL372 ARG373 GLU374 VAL375 LEU376 ASN377 GLU378 THR379 THR380 ASN381 TRP382 LEU383 TRP384 ALA385 HIS386 LEU387 SER388 ARG389 GLU390 LYS391 ARG392 PRO393 ARG394 LEU395 CYS396 THR397 LYS398 GLU399 GLU400 PHE401 ILE402 LYS403 LYS404 VAL405 ASN406 SER407 ASN408 ALA409 ALA410 LEU411 GLY412 ALA413 VAL414 PHE415 ALA416 GLU417 GLN418 ASN419 GLN420 TRP421 SER422 THR423 ALA424 ARG425 GLU426 ALA427 VAL428 ASN429 ASP430 PRO431 ARG432 PHE433 TRP434 GLU435 MET436 VAL437 ASP438 GLU439 GLU440 ARG441 GLU442 ASN443 HIS444 LEU445 ARG446 GLY447 GLU448 CYS449 HIS450 THR451 CYS452 ILE453 TYR454 ASN455 MET456 MET457 GLY458 LYS459 ARG460 GLU461 LYS462 LYS463 PRO464 GLY465 GLU466 PHE467 GLY468 LYS469 ALA470 LYS471 GLY472 SER473 ARG474 ALA475 ILE476 TRP477 PHE478 MET479 TRP480 LEU481 GLY482 ALA483 ARG484 TYR485 LEU486 GLU487 PHE488 GLU489 ALA490 LEU491 GLY492 PHE493 LEU494 ASN495 GLU496 ASP497 HIS498 TRP499 LEU500 SER501 ARG502 GLU503 ASN504 SER505 GLY506 GLY507 GLY508 VAL509 GLU510 GLY511 SER512 GLY513 VAL514 GLN515 LYS516 LEU517 GLY518 TYR519 ILE520 LEU521 ARG522 ASP523 ILE524 ALA525 GLY526 LYS527 GLN528 GLY529 GLY530 LYS531 MET532 TYR533 ALA534 ASP535 ASP536 THR537 ALA538 GLY539 TRP540 ASP541 THR542 ARG543 ILE544 THR545 ARG546 THR547 ASP548 LEU549 GLU550 ASN551 GLU552 ALA553 LYS554 VAL555 LEU556 GLU557 LEU558 LEU559 ASP560 GLY561 GLU562 HIS563 ARG564 MET565 LEU566 ALA567 ARG568 ALA569 ILE570 ILE571 GLU572 LEU573 THR574 TYR575 ARG576 HIS577 LYS578 VAL579 VAL580 LYS581 VAL582 MET583 ARG584 PRO585 ALA586 ALA587 GLU588 GLY589 LYS590 THR591 VAL592 MET593 ASP594 VAL595 ILE596 SER597 ARG598 GLU599 ASP600 GLN601 ARG602 GLY603 SER604 GLY605 GLN606 VAL607 VAL608 THR609 TYR610 ALA611 LEU612 ASN613 THR614 PHE615 THR616 ASN617 ILE618 ALA619 VAL620 GLN621 LEU622 VAL623 ARG624 LEU625 MET626 GLU627 ALA628 GLU629 GLY630 VAL631 ILE632 GLY633 PRO634 GLN635 HIS636 LEU637 GLU638 GLN639 LEU640 PRO641 ARG642 LYS643 ASN644 LYS645 ILE646 ALA647 VAL648 ARG649 THR650 TRP651 LEU652 PHE653 GLU654 ASN655 GLY656 GLU657 GLU658 ARG659 VAL660 THR661 ARG662 MET663 ALA664 ILE665 SER666 GLY667 ASP668 ASP669 CYS670 VAL671 VAL672 LYS673 PRO674 LEU675 ASP676 ASP677 ARG678 PHE679 ALA680 THR681 ALA682 LEU683 HIS684 PHE685 LEU686 ASN687 ALA688 MET689 SER690 LYS691 VAL692 ARG693 LYS694 ASP695 ILE696 GLN697 GLU698 TRP699 LYS700 PRO701 SER702 HIS703 GLY704 TRP705 HIS706 ASP707 TRP708 GLN709 GLN710 VAL711 PRO712 PHE713 CYS714 SER715 ASN716 HIS717 PHE718 GLN719 GLU720 ILE721 VAL722 MET723 LYS724 ASP725 GLY726 ARG727 SER728 ILE729 VAL730 VAL731 PRO732 CYS733 ARG734 GLY735 GLN736 ASP737 GLU738 LEU739 ILE740 GLY741 ARG742 ALA743 ARG744 ILE745 SER746 PRO747 GLY748 ALA749 GLY750 TRP751 ASN752 VAL753 LYS754 ASP755 THR756 ALA757 CYS758 LEU759 ALA760 LYS761 ALA762 TYR763 ALA764 GLN765 MET766 TRP767 LEU768 LEU769 LEU770 TYR771 PHE772 HIS773 ARG774 ARG775 ASP776 LEU777 ARG778 LEU779 MET780 ALA781 ASN782 ALA783 ILE784 CYS785 SER786 ALA787 VAL788 PRO789 VAL790 ASP791 TRP792 VAL793 PRO794 THR795 GLY796 ARG797 THR798 SER799 TRP800 SER801 ILE802 HIS803 SER804 LYS805 GLY806 GLU807 TRP808 MET809 THR810 THR811 GLU812 ASP813 MET814 LEU815 GLN816 VAL817 TRP818 ASN819 ARG820 VAL821 TRP822 ILE823 GLU824 GLU825 ASN826 GLU827 TRP828 MET829 MET830 ASP831 LYS832 THR833 PRO834 ILE835 ALA836 SER837 TRP838 THR839 ASP840 VAL841 PRO842 TYR843 VAL844 GLY845 LYS846 ARG847 GLU848 ASP849 ILE850 TRP851 CYS852 GLY853 SER854 LEU855 ILE856 GLY857 THR858 ARG859 SER860 ARG861 ALA862 THR863 TRP864 ALA865 GLU866 ASN867 ILE868 TYR869 ALA870 ALA871 ILE872 ASN873 GLN874 VAL875 ARG876 ALA877 VAL878 ILE879 GLY880 LYS881 GLU882 ASN883 TYR884 VAL885 ASP886 TYR887 MET888 THR889
Unit 2 SER274 ASN275 GLN276 GLU277 LYS278 ILE279 LYS280 LYS281 ARG282 ILE283 GLN284 LYS285 LEU286 LYS287 GLU288 GLU289 PHE290 ALA291 THR292 THR293 TRP294 HIS295 LYS296 ASP297 PRO298 GLU299 HIS300 PRO301 TYR302 ARG303 THR304 TRP305 THR306 TYR307 HIS308 GLY309 SER310 TYR311 GLU312 VAL313 LYS314 ALA315 THR316 GLY317 LEU322 VAL323 ASN324 GLY325 VAL326 VAL327 LYS328 LEU329 MET330 SER331 LYS332 PRO333 TRP334 ASP335 ALA336 ILE337 ALA338 ASN339 VAL340 THR341 THR342 MET343 ALA344 MET345 THR346 ASP347 THR348 THR349 PRO350 PHE351 GLY352 GLN353 GLN354 ARG355 VAL356 PHE357 LYS358 GLU359 LYS360 VAL361 ASP362 THR363 LYS364 ALA365 PRO366 GLU367 PRO368 PRO369 ALA370 GLY371 VAL372 ARG373 GLU374 VAL375 LEU376 ASN377 GLU378 THR379 THR380 ASN381 TRP382 LEU383 TRP384 ALA385 HIS386 LEU387 SER388 ARG389 GLU390 LYS391 ARG392 PRO393 ARG394 LEU395 CYS396 THR397 LYS398 GLU399 GLU400 PHE401 ILE402 LYS403 LYS404 VAL405 ASN406 SER407 ASN408 ALA409 ALA410 LEU411 GLY412 ALA413 VAL414 PHE415 ALA416 GLU417 GLN418 ASN419 GLN420 TRP421 SER422 THR423 ALA424 ARG425 GLU426 ALA427 VAL428 ASN429 ASP430 PRO431 ARG432 PHE433 TRP434 GLU435 MET436 VAL437 ASP438 GLU439 GLU440 ARG441 GLU442 ASN443 HIS444 LEU445 ARG446 GLY447 GLU448 CYS449 HIS450 THR451 CYS452 ILE453 TYR454 ASN455 MET456 MET457 GLY458 LYS459 ARG460 GLU461 LYS462 LYS463 PRO464 GLY465 GLU466 PHE467 GLY468 LYS469 ALA470 LYS471 GLY472 SER473 ARG474 ALA475 ILE476 TRP477 PHE478 MET479 TRP480 LEU481 GLY482 ALA483 ARG484 TYR485 LEU486 GLU487 PHE488 GLU489 ALA490 LEU491 GLY492 PHE493 LEU494 ASN495 GLU496 ASP497 HIS498 TRP499 LEU500 SER501 ARG502 GLU503 ASN504 SER505 GLY506 GLY507 GLY508 VAL509 GLU510 GLY511 SER512 GLY513 VAL514 GLN515 LYS516 LEU517 GLY518 TYR519 ILE520 LEU521 ARG522 ASP523 ILE524 ALA525 GLY526 LYS527 GLN528 GLY529 GLY530 LYS531 MET532 TYR533 ALA534 ASP535 ASP536 THR537 ALA538 GLY539 TRP540 ASP541 THR542 ARG543 ILE544 THR545 ARG546 THR547 ASP548 LEU549 GLU550 ASN551 GLU552 ALA553 LYS554 VAL555 LEU556 GLU557 LEU558 LEU559 ASP560 GLY561 GLU562 HIS563 ARG564 MET565 LEU566 ALA567 ARG568 ALA569 ILE570 ILE571 GLU572 LEU573 THR574 TYR575 ARG576 HIS577 LYS578 VAL579 VAL580 LYS581 VAL582 MET583 ARG584 PRO585 ALA586 ALA587 GLU588 GLY589 LYS590 THR591 VAL592 MET593 ASP594 VAL595 ILE596 SER597 ARG598 GLU599 ASP600 GLN601 ARG602 GLY603 SER604 GLY605 GLN606 VAL607 VAL608 THR609 TYR610 ALA611 LEU612 ASN613 THR614 PHE615 THR616 ASN617 ILE618 ALA619 VAL620 GLN621 LEU622 VAL623 ARG624 LEU625 MET626 GLU627 ALA628 GLU629 GLY630 VAL631 ILE632 GLY633 PRO634 GLN635 HIS636 LEU637 GLU638 GLN639 LEU640 PRO641 ARG642 LYS643 ASN644 LYS645 ILE646 ALA647 VAL648 ARG649 THR650 TRP651 LEU652 PHE653 GLU654 ASN655 GLY656 GLU657 GLU658 ARG659 VAL660 THR661 ARG662 MET663 ALA664 ILE665 SER666 GLY667 ASP668 ASP669 CYS670 VAL671 VAL672 LYS673 PRO674 LEU675 ASP676 ASP677 ARG678 PHE679 ALA680 THR681 ALA682 LEU683 HIS684 PHE685 LEU686 ASN687 ALA688 MET689 SER690 LYS691 VAL692 ARG693 LYS694 ASP695 ILE696 GLN697 GLU698 TRP699 LYS700 PRO701 SER702 HIS703 GLY704 TRP705 HIS706 ASP707 TRP708 GLN709 GLN710 VAL711 PRO712 PHE713 CYS714 SER715 ASN716 HIS717 PHE718 GLN719 GLU720 ILE721 VAL722 MET723 LYS724 ASP725 GLY726 ARG727 SER728 ILE729 VAL730 VAL731 PRO732 CYS733 ARG734 GLY735 GLN736 ASP737 GLU738 LEU739 ILE740 GLY741 ARG742 ALA743 ARG744 ILE745 SER746 PRO747 GLY748 ALA749 GLY750 TRP751 ASN752 VAL753 LYS754 ASP755 THR756 ALA757 CYS758 LEU759 ALA760 LYS761 ALA762 TYR763 ALA764 GLN765 MET766 TRP767 LEU768 LEU769 LEU770 TYR771 PHE772 HIS773 ARG774 ARG775 ASP776 LEU777 ARG778 LEU779 MET780 ALA781 ASN782 ALA783 ILE784 CYS785 SER786 ALA787 VAL788 PRO789 VAL790 ASP791 TRP792 VAL793 PRO794 THR795 GLY796 ARG797 THR798 SER799 TRP800 SER801 ILE802 HIS803 SER804 LYS805 GLY806 GLU807 TRP808 MET809 THR810 THR811 GLU812 ASP813 MET814 LEU815 GLN816 VAL817 TRP818 ASN819 ARG820 VAL821 TRP822 ILE823 GLU824 GLU825 ASN826 GLU827 TRP828 MET829 MET830 ASP831 LYS832 THR833 PRO834 ILE835 ALA836 SER837 TRP838 THR839 ASP840 VAL841 PRO842 TYR843 VAL844 GLY845 LYS846 ARG847 GLU848 ASP849 ILE850 TRP851 CYS852 GLY853 SER854 LEU855 ILE856 GLY857 THR858 ARG859 SER860 ARG861 ALA862 THR863 TRP864 ALA865 GLU866 ASN867 ILE868 TYR869 ALA870 ALA871 ILE872 ASN873 GLN874 VAL875 ARG876 ALA877 VAL878 ILE879 GLY880 LYS881 GLU882 ASN883 TYR884 VAL885 ASP886 TYR887 MET888 THR889
Ligands
Unit 3 GTP1001 ZN1002 ZN1003
Unit 4 GTP1001 ZN1002 ZN1003
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany