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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BRADYRHIZOBIUM JAPONICUM GLYCINE:[CARRI PROTEIN] LIGASE COMPLEXED WITH COGNATE CARRIER PROTEIN AND
Keywords LIGASE, ATP BINDING, GLYCINE BINDING, CARRIER PROTEIN, AMINO SYNTHETASE, SERYL-TRNA SYNTHETASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4H2S     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AMINO ACID--[ACYL-CARRIER-PROTEIN] LIGASE 1  A 295 2299 0
2  Protein   AMINO ACID--[ACYL-CARRIER-PROTEIN] LIGASE 1  B 297 2302 0
3  Protein   AMINOACYL CARRIER PROTEIN 1  C 33 218 0
4  Protein   AMINOACYL CARRIER PROTEIN 1  D 74 518 0
5  Ligand   AMINO ACID--[ACYL-CARRIER-PROTEIN] LIGASE 1  A 2 0 24
6  Ligand   AMINO ACID--[ACYL-CARRIER-PROTEIN] LIGASE 1  B 3 0 28
7  Ligand   AMINOACYL CARRIER PROTEIN 1  C 1 0 21
8  Ligand   AMINOACYL CARRIER PROTEIN 1  D 1 0 21
9 Water     418 0 418
total       1124 5337 512

Proteins
Unit 1 ASP18 PRO19 LEU20 ASP21 HIS22 LEU23 ALA24 ASP25 LYS26 LEU27 PHE28 HIS29 SER30 MET31 GLY32 SER33 ASP34 GLY35 VAL36 TYR37 ALA38 ARG39 THR40 ALA41 LEU42 TYR43 GLU44 SER45 ILE46 VAL47 GLU48 ARG49 LEU50 ALA51 ALA52 LEU53 ILE54 THR55 SER56 HIS57 ARG58 GLU59 ALA60 GLY61 THR62 GLU63 ALA64 LEU65 ARG66 PHE67 PRO68 PRO69 VAL70 MET71 SER72 ARG73 ALA74 GLN75 LEU76 GLU77 LYS78 SER79 GLY80 TYR81 LEU82 LYS83 SER84 PHE85 PRO86 ASN87 LEU88 LEU89 GLY90 CYS91 VAL92 CYS93 GLY94 LEU95 HIS96 GLY97 THR98 GLU99 ARG100 GLU101 ILE102 ASN103 ALA104 ALA105 VAL106 SER107 ARG108 PHE109 ASP110 ALA111 GLY112 GLY113 ASP114 TRP115 THR116 THR117 SER118 LEU119 SER120 PRO121 ALA122 ASP123 LEU124 VAL125 LEU126 SER127 PRO128 ALA129 ALA130 CYS131 TYR132 PRO133 VAL134 TYR135 PRO136 ILE137 ALA138 ALA139 SER140 ARG141 GLY142 PRO143 LEU144 PRO145 LYS146 GLY147 GLY148 LEU149 ARG150 PHE151 ASP152 VAL153 ALA154 ALA155 ASP156 CYS157 PHE158 ARG159 ARG160 GLU161 PRO162 SER163 LYS164 HIS165 LEU166 ASP167 ARG168 LEU169 GLN170 SER171 PHE172 ARG173 MET174 ARG175 GLU176 TYR177 VAL178 CYS179 ILE180 GLY181 THR182 PRO183 ASP184 ASP185 VAL186 SER187 ASP188 PHE189 ARG190 GLU191 ARG192 TRP193 MET194 VAL195 ARG196 ALA197 GLN198 ALA199 ILE200 ALA201 ARG202 ASP203 LEU204 GLY205 LEU206 THR207 PHE208 ARG209 VAL210 ASP211 TYR212 ALA213 SER214 ASP215 PRO216 PHE217 PHE218 GLY219 ARG220 VAL221 GLY222 GLN223 MET224 LYS225 ALA226 VAL227 SER228 GLN229 LYS230 GLN231 GLN232 GLN233 LEU234 LYS235 PHE236 GLU237 LEU238 LEU239 ILE240 PRO241 LEU242 ARG243 SER244 GLU245 GLU246 GLN247 PRO248 THR249 ALA250 CYS251 MET252 SER253 PHE254 ASN255 TYR256 HIS257 ARG258 GLU259 HIS260 PHE261 GLY262 THR263 THR264 TRP265 GLY266 ILE267 GLN268 ASP269 ALA270 ASN271 GLY272 GLU273 PRO274 ALA275 HIS276 THR277 GLY278 CYS279 VAL280 ALA281 PHE282 GLY283 MET284 ASP285 ARG286 LEU287 ALA288 VAL289 ALA290 MET291 PHE292 HIS293 THR294 HIS295 GLY296 THR297 ASP298 LEU299 SER300 ALA301 TRP302 PRO303 ALA304 LYS305 VAL306 ARG307 ASP308 ILE309 LEU310 GLY311 LEU312
Unit 2 ALA17 ASP18 PRO19 LEU20 ASP21 HIS22 LEU23 ALA24 ASP25 LYS26 LEU27 PHE28 HIS29 SER30 MET31 GLY32 SER33 ASP34 GLY35 VAL36 TYR37 ALA38 ARG39 THR40 ALA41 LEU42 TYR43 GLU44 SER45 ILE46 VAL47 GLU48 ARG49 LEU50 ALA51 ALA52 LEU53 ILE54 THR55 SER56 HIS57 ARG58 GLU59 ALA60 GLY61 THR62 GLU63 ALA64 LEU65 ARG66 PHE67 PRO68 PRO69 VAL70 MET71 SER72 ARG73 ALA74 GLN75 LEU76 GLU77 LYS78 SER79 GLY80 TYR81 LEU82 LYS83 SER84 PHE85 PRO86 ASN87 LEU88 LEU89 GLY90 CYS91 VAL92 CYS93 GLY94 LEU95 HIS96 GLY97 THR98 GLU99 ARG100 GLU101 ILE102 ASN103 ALA104 ALA105 VAL106 SER107 ARG108 PHE109 ASP110 ALA111 GLY112 GLY113 ASP114 TRP115 THR116 THR117 SER118 LEU119 SER120 PRO121 ALA122 ASP123 LEU124 VAL125 LEU126 SER127 PRO128 ALA129 ALA130 CYS131 TYR132 PRO133 VAL134 TYR135 PRO136 ILE137 ALA138 ALA139 SER140 ARG141 GLY142 PRO143 LEU144 PRO145 LYS146 GLY147 GLY148 LEU149 ARG150 PHE151 ASP152 VAL153 ALA154 ALA155 ASP156 CYS157 PHE158 ARG159 ARG160 GLU161 PRO162 SER163 LYS164 HIS165 LEU166 ASP167 ARG168 LEU169 GLN170 SER171 PHE172 ARG173 MET174 ARG175 GLU176 TYR177 VAL178 CYS179 ILE180 GLY181 THR182 PRO183 ASP184 ASP185 VAL186 SER187 ASP188 PHE189 ARG190 GLU191 ARG192 TRP193 MET194 VAL195 ARG196 ALA197 GLN198 ALA199 ILE200 ALA201 ARG202 ASP203 LEU204 GLY205 LEU206 THR207 PHE208 ARG209 VAL210 ASP211 TYR212 ALA213 SER214 ASP215 PRO216 PHE217 PHE218 GLY219 ARG220 VAL221 GLY222 GLN223 MET224 LYS225 ALA226 VAL227 SER228 GLN229 LYS230 GLN231 GLN232 GLN233 LEU234 LYS235 PHE236 GLU237 LEU238 LEU239 ILE240 PRO241 LEU242 ARG243 SER244 GLU245 GLU246 GLN247 PRO248 THR249 ALA250 CYS251 MET252 SER253 PHE254 ASN255 TYR256 HIS257 ARG258 GLU259 HIS260 PHE261 GLY262 THR263 THR264 TRP265 GLY266 ILE267 GLN268 ASP269 ALA270 ASN271 GLY272 GLU273 PRO274 ALA275 HIS276 THR277 GLY278 CYS279 VAL280 ALA281 PHE282 GLY283 MET284 ASP285 ARG286 LEU287 ALA288 VAL289 ALA290 MET291 PHE292 HIS293 THR294 HIS295 GLY296 THR297 ASP298 LEU299 SER300 ALA301 TRP302 PRO303 ALA304 LYS305 VAL306 ARG307 ASP308 ILE309 LEU310 GLY311 LEU312 GLN313
Unit 3 LYS34 LEU35 VAL36 ASP37 VAL38 GLY39 LEU40 THR41 SER42 MET43 ASP44 MET45 VAL46 ASN47 LEU48 MET49 LEU50 GLY51 VAL52 GLU53 ALA54 GLU55 PHE56 ASP57 PHE58 THR59 GLU64 ILE65 THR66 PRO67 GLU68 ASN69 PHE70
Unit 4 ASP7 VAL8 ARG9 ASN10 ARG11 ILE12 ILE13 LYS14 LEU15 VAL16 LYS17 GLY18 ILE19 LEU20 GLU21 GLN22 ASN23 ALA24 LEU25 ALA26 ALA27 ASP28 VAL29 THR30 PRO31 GLN32 ALA33 LYS34 LEU35 VAL36 ASP37 VAL38 GLY39 LEU40 THR41 SER42 MET43 ASP44 MET45 VAL46 ASN47 LEU48 MET49 LEU50 GLY51 VAL52 GLU53 ALA54 GLU55 PHE56 ASP57 PHE58 THR59 ILE60 PRO61 GLN62 SER63 GLU64 ILE65 THR66 PRO67 GLU68 ASN69 PHE70 GLN71 SER72 VAL73 GLU74 THR75 LEU76 GLU77 ARG78 MET79 VAL80

Ligands
Unit 5 ZN1000 AMP1001
Unit 6 ZN401 AMP402 ACT403
Unit 7 PNS1000
Unit 8 PNS1000

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany