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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE AND CONFORMATIONAL CHANGE OF A REPLICATION PROTEIN HETEROTRIMER BOUND TO SSDNA
Keywords OB FOLD, SSDNA BINDING, DNA BINDING PROTEIN-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4GOP     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  A 108 809 0
2  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  B 122 978 0
3  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  C 433 3437 0
4  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  X 108 809 0
5  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  Y 122 978 0
6  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  Z 433 3437 0
7  Other macromolecule   DNA (25-MER)  K 25 500 0
8  Other macromolecule   DNA (25-MER)  L 20 400 0
9  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN  C 1 0 1
10  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN  Z 1 0 1
total       1373 11348 2
Proteins
Unit 1 MET1 GLU2 LYS3 PRO4 THR5 PRO6 LEU7 ILE8 ASN9 SER10 SER11 MET12 LEU13 GLY14 GLN15 TYR16 VAL17 GLY18 GLN19 THR20 VAL21 ARG22 ILE23 VAL24 GLY25 LYS26 VAL27 HIS28 LYS29 VAL30 THR31 GLY32 ASN33 THR34 LEU35 LEU36 MET37 GLN38 THR39 SER40 ASP41 LEU42 GLY43 ASN44 VAL45 GLU46 ILE47 ALA48 MET49 THR50 PRO51 ASP52 SER53 ASP54 VAL55 SER56 SER57 SER58 THR59 PHE60 VAL61 GLU62 VAL63 THR64 GLY65 LYS66 VAL67 SER68 ASP69 ALA70 GLY71 SER72 SER73 PHE74 GLN75 ALA76 ASN77 GLN78 ILE79 ARG80 GLU81 PHE82 THR83 THR84 VAL85 ASP90 VAL91 ASP92 LEU93 THR94 LEU95 VAL96 GLU97 ASN98 VAL99 VAL100 GLN101 ILE102 SER103 ALA104 ALA105 PHE106 PRO107 ASN108 LEU109 PHE110 SER111 ASP112
Unit 2 ASN46 THR47 LEU48 ARG49 PRO50 VAL51 THR52 ILE53 ARG54 GLN55 ILE56 LEU57 ASN58 ALA59 GLU60 GLN61 PRO62 HIS63 PRO64 ASP65 ALA66 GLU67 PHE68 ILE69 LEU70 ASP71 GLY72 ALA73 GLU74 LEU75 GLY76 GLN77 LEU78 THR79 PHE80 VAL81 ALA82 VAL83 VAL84 ARG85 ASN86 ILE87 SER88 ARG89 ASN90 ALA91 THR92 ASN93 VAL94 ALA95 TYR96 SER97 VAL98 GLU99 ASP100 GLY101 THR102 GLY103 GLN104 ILE105 GLU106 VAL107 ARG108 GLN109 TRP110 LEU111 ASP112 ALA121 SER122 GLU123 ILE124 ARG125 ASN126 ASN127 VAL128 TYR129 VAL130 ARG131 VAL132 LEU133 GLY134 THR135 LEU136 LYS137 SER138 PHE139 GLN140 ASN141 ARG142 ARG143 SER144 ILE145 SER146 SER147 GLY148 HIS149 MET150 ARG151 PRO152 VAL153 ILE154 ASP155 TYR156 ASN157 GLU158 VAL159 MET160 PHE161 HIS162 ARG163 LEU164 GLU165 ALA166 VAL167 HIS168 ALA169 HIS170 LEU171 GLN172 VAL173 THR174 ARG175
Unit 3 ILE182 TYR183 PRO184 ILE185 GLU186 GLY187 LEU188 SER189 PRO190 TYR191 GLN192 ASN193 ARG194 TRP195 THR196 ILE197 LYS198 ALA199 ARG200 VAL201 THR202 SER203 LYS204 SER205 ASP206 ILE207 ARG208 HIS209 TRP210 SER211 ASN212 GLN213 ARG214 GLY215 GLU216 GLY217 LYS218 LEU219 PHE220 SER221 VAL222 ASN223 LEU224 LEU225 ASP226 ASP227 SER228 GLY229 GLU230 ILE231 LYS232 ALA233 THR234 GLY235 PHE236 ASN237 ASP238 ALA239 VAL240 ASP241 ARG242 PHE243 TYR244 PRO245 LEU246 LEU247 GLN248 GLU249 ASN250 HIS251 VAL252 TYR253 LEU254 ILE255 SER256 LYS257 ALA258 ARG259 VAL260 ASN261 ILE262 ALA263 LYS264 LYS265 GLN266 PHE267 SER268 ASN269 LEU270 GLN271 ASN272 GLU273 TYR274 GLU275 ILE276 THR277 PHE278 GLU279 ASN280 SER281 THR282 GLU283 ILE284 GLU285 GLU286 CYS287 THR288 ASP289 ALA290 THR291 ASP292 VAL293 PRO294 GLU295 VAL296 LYS297 TYR298 GLU299 PHE300 VAL301 ARG302 ILE303 ASN304 GLU305 LEU306 GLU307 SER308 VAL309 GLU310 ALA311 ASN312 GLN313 GLN314 CYS315 ASP316 VAL317 ILE318 GLY319 ILE320 LEU321 ASP322 SER323 TYR324 GLY325 GLU326 LEU327 SER328 GLU329 ILE330 VAL331 SER332 LYS333 ALA334 SER335 GLN336 ARG337 PRO338 VAL339 GLN340 LYS341 ARG342 GLU343 LEU344 THR345 LEU346 VAL347 ASP348 GLN349 GLY350 ASN351 ARG352 SER353 VAL354 LYS355 LEU356 THR357 LEU358 TRP359 GLY360 LYS361 THR362 ALA363 GLU364 THR365 PHE366 PRO367 THR368 ASN369 ALA370 GLY371 VAL372 ASP373 GLU374 LYS375 PRO376 VAL377 LEU378 ALA379 PHE380 LYS381 GLY382 VAL383 LYS384 VAL385 GLY386 ASP387 PHE388 GLY389 GLY390 ARG391 SER392 LEU393 SER394 MET395 PHE396 SER397 SER398 SER399 THR400 MET401 LEU402 ILE403 ASN404 PRO405 ASP406 ILE407 THR408 GLU409 SER410 HIS411 VAL412 LEU413 ARG414 GLY415 TRP416 TYR417 ASP418 ASN419 ASP420 GLY421 ALA422 HIS423 ALA424 GLN425 PHE426 GLN427 PRO428 TYR429 THR430 ASN431 GLY441 GLY442 GLY443 ALA444 GLY445 ALA446 ASN447 MET448 ALA449 GLU450 ARG451 ARG452 THR453 ILE454 VAL455 GLN456 VAL457 LYS458 ASP459 GLU460 ASN461 LEU462 GLY463 MET464 SER465 GLU466 LYS467 PRO468 ASP469 TYR470 PHE471 ASN472 VAL473 ARG474 ALA475 THR476 VAL477 VAL478 TYR479 ILE480 LYS481 GLN482 GLU483 ASN484 LEU485 TYR486 TYR487 THR488 ALA489 CYS490 ALA491 SER492 GLU493 GLY494 CYS495 ASN496 LYS497 LYS498 VAL499 ASN500 LEU501 ASP502 HIS503 GLU504 ASN505 ASN506 TRP507 ARG508 CYS509 GLU510 LYS511 CYS512 ASP513 ARG514 SER515 TYR516 ALA517 THR518 PRO519 GLU520 TYR521 ARG522 TYR523 ILE524 LEU525 SER526 THR527 ASN528 VAL529 ALA530 ASP531 ALA532 THR533 GLY534 GLN535 MET536 TRP537 LEU538 SER539 GLY540 PHE541 ASN542 GLU543 ASP544 ALA545 THR546 GLN547 LEU548 ILE549 GLY550 MET551 SER552 ALA553 GLY554 GLU555 LEU556 HIS557 LYS558 LEU559 ARG560 GLU561 GLU562 SER563 GLU564 SER565 GLU566 PHE567 SER568 ALA569 ALA570 LEU571 HIS572 ARG573 ALA574 ALA575 ASN576 ARG577 MET578 TYR579 MET580 PHE581 ASN582 CYS583 ARG584 ALA585 LYS586 MET587 ASP588 THR589 PHE590 ASN591 ASP592 THR593 ALA594 ARG595 VAL596 ARG597 TYR598 THR599 ILE600 SER601 ARG602 ALA603 ALA604 PRO605 VAL606 ASP607 PHE608 ALA609 LYS610 ALA611 GLY612 MET613 GLU614 LEU615 VAL616 ASP617 ALA618 ILE619 ARG620 ALA621 TYR622 MET623
Unit 4 MET1 GLU2 LYS3 PRO4 THR5 PRO6 LEU7 ILE8 ASN9 SER10 SER11 MET12 LEU13 GLY14 GLN15 TYR16 VAL17 GLY18 GLN19 THR20 VAL21 ARG22 ILE23 VAL24 GLY25 LYS26 VAL27 HIS28 LYS29 VAL30 THR31 GLY32 ASN33 THR34 LEU35 LEU36 MET37 GLN38 THR39 SER40 ASP41 LEU42 GLY43 ASN44 VAL45 GLU46 ILE47 ALA48 MET49 THR50 PRO51 ASP52 SER53 ASP54 VAL55 SER56 SER57 SER58 THR59 PHE60 VAL61 GLU62 VAL63 THR64 GLY65 LYS66 VAL67 SER68 ASP69 ALA70 GLY71 SER72 SER73 PHE74 GLN75 ALA76 ASN77 GLN78 ILE79 ARG80 GLU81 PHE82 THR83 THR84 VAL85 ASP90 VAL91 ASP92 LEU93 THR94 LEU95 VAL96 GLU97 ASN98 VAL99 VAL100 GLN101 ILE102 SER103 ALA104 ALA105 PHE106 PRO107 ASN108 LEU109 PHE110 SER111 ASP112
Unit 5 ASN46 THR47 LEU48 ARG49 PRO50 VAL51 THR52 ILE53 ARG54 GLN55 ILE56 LEU57 ASN58 ALA59 GLU60 GLN61 PRO62 HIS63 PRO64 ASP65 ALA66 GLU67 PHE68 ILE69 LEU70 ASP71 GLY72 ALA73 GLU74 LEU75 GLY76 GLN77 LEU78 THR79 PHE80 VAL81 ALA82 VAL83 VAL84 ARG85 ASN86 ILE87 SER88 ARG89 ASN90 ALA91 THR92 ASN93 VAL94 ALA95 TYR96 SER97 VAL98 GLU99 ASP100 GLY101 THR102 GLY103 GLN104 ILE105 GLU106 VAL107 ARG108 GLN109 TRP110 LEU111 ASP112 ALA121 SER122 GLU123 ILE124 ARG125 ASN126 ASN127 VAL128 TYR129 VAL130 ARG131 VAL132 LEU133 GLY134 THR135 LEU136 LYS137 SER138 PHE139 GLN140 ASN141 ARG142 ARG143 SER144 ILE145 SER146 SER147 GLY148 HIS149 MET150 ARG151 PRO152 VAL153 ILE154 ASP155 TYR156 ASN157 GLU158 VAL159 MET160 PHE161 HIS162 ARG163 LEU164 GLU165 ALA166 VAL167 HIS168 ALA169 HIS170 LEU171 GLN172 VAL173 THR174 ARG175
Unit 6 ILE182 TYR183 PRO184 ILE185 GLU186 GLY187 LEU188 SER189 PRO190 TYR191 GLN192 ASN193 ARG194 TRP195 THR196 ILE197 LYS198 ALA199 ARG200 VAL201 THR202 SER203 LYS204 SER205 ASP206 ILE207 ARG208 HIS209 TRP210 SER211 ASN212 GLN213 ARG214 GLY215 GLU216 GLY217 LYS218 LEU219 PHE220 SER221 VAL222 ASN223 LEU224 LEU225 ASP226 ASP227 SER228 GLY229 GLU230 ILE231 LYS232 ALA233 THR234 GLY235 PHE236 ASN237 ASP238 ALA239 VAL240 ASP241 ARG242 PHE243 TYR244 PRO245 LEU246 LEU247 GLN248 GLU249 ASN250 HIS251 VAL252 TYR253 LEU254 ILE255 SER256 LYS257 ALA258 ARG259 VAL260 ASN261 ILE262 ALA263 LYS264 LYS265 GLN266 PHE267 SER268 ASN269 LEU270 GLN271 ASN272 GLU273 TYR274 GLU275 ILE276 THR277 PHE278 GLU279 ASN280 SER281 THR282 GLU283 ILE284 GLU285 GLU286 CYS287 THR288 ASP289 ALA290 THR291 ASP292 VAL293 PRO294 GLU295 VAL296 LYS297 TYR298 GLU299 PHE300 VAL301 ARG302 ILE303 ASN304 GLU305 LEU306 GLU307 SER308 VAL309 GLU310 ALA311 ASN312 GLN313 GLN314 CYS315 ASP316 VAL317 ILE318 GLY319 ILE320 LEU321 ASP322 SER323 TYR324 GLY325 GLU326 LEU327 SER328 GLU329 ILE330 VAL331 SER332 LYS333 ALA334 SER335 GLN336 ARG337 PRO338 VAL339 GLN340 LYS341 ARG342 GLU343 LEU344 THR345 LEU346 VAL347 ASP348 GLN349 GLY350 ASN351 ARG352 SER353 VAL354 LYS355 LEU356 THR357 LEU358 TRP359 GLY360 LYS361 THR362 ALA363 GLU364 THR365 PHE366 PRO367 THR368 ASN369 ALA370 GLY371 VAL372 ASP373 GLU374 LYS375 PRO376 VAL377 LEU378 ALA379 PHE380 LYS381 GLY382 VAL383 LYS384 VAL385 GLY386 ASP387 PHE388 GLY389 GLY390 ARG391 SER392 LEU393 SER394 MET395 PHE396 SER397 SER398 SER399 THR400 MET401 LEU402 ILE403 ASN404 PRO405 ASP406 ILE407 THR408 GLU409 SER410 HIS411 VAL412 LEU413 ARG414 GLY415 TRP416 TYR417 ASP418 ASN419 ASP420 GLY421 ALA422 HIS423 ALA424 GLN425 PHE426 GLN427 PRO428 TYR429 THR430 ASN431 GLY441 GLY442 GLY443 ALA444 GLY445 ALA446 ASN447 MET448 ALA449 GLU450 ARG451 ARG452 THR453 ILE454 VAL455 GLN456 VAL457 LYS458 ASP459 GLU460 ASN461 LEU462 GLY463 MET464 SER465 GLU466 LYS467 PRO468 ASP469 TYR470 PHE471 ASN472 VAL473 ARG474 ALA475 THR476 VAL477 VAL478 TYR479 ILE480 LYS481 GLN482 GLU483 ASN484 LEU485 TYR486 TYR487 THR488 ALA489 CYS490 ALA491 SER492 GLU493 GLY494 CYS495 ASN496 LYS497 LYS498 VAL499 ASN500 LEU501 ASP502 HIS503 GLU504 ASN505 ASN506 TRP507 ARG508 CYS509 GLU510 LYS511 CYS512 ASP513 ARG514 SER515 TYR516 ALA517 THR518 PRO519 GLU520 TYR521 ARG522 TYR523 ILE524 LEU525 SER526 THR527 ASN528 VAL529 ALA530 ASP531 ALA532 THR533 GLY534 GLN535 MET536 TRP537 LEU538 SER539 GLY540 PHE541 ASN542 GLU543 ASP544 ALA545 THR546 GLN547 LEU548 ILE549 GLY550 MET551 SER552 ALA553 GLY554 GLU555 LEU556 HIS557 LYS558 LEU559 ARG560 GLU561 GLU562 SER563 GLU564 SER565 GLU566 PHE567 SER568 ALA569 ALA570 LEU571 HIS572 ARG573 ALA574 ALA575 ASN576 ARG577 MET578 TYR579 MET580 PHE581 ASN582 CYS583 ARG584 ALA585 LYS586 MET587 ASP588 THR589 PHE590 ASN591 ASP592 THR593 ALA594 ARG595 VAL596 ARG597 TYR598 THR599 ILE600 SER601 ARG602 ALA603 ALA604 PRO605 VAL606 ASP607 PHE608 ALA609 LYS610 ALA611 GLY612 MET613 GLU614 LEU615 VAL616 ASP617 ALA618 ILE619 ARG620 ALA621 TYR622 MET623
Other macromolecules
Unit 7 DT1 DT2 DT3 DT4 DT5 DT6 DT7 DT8 DT9 DT10 DT11 DT12 DT13 DT14 DT15 DT16 DT17 DT18 DT19 DT20 DT21 DT22 DT23 DT24 DT25
Unit 8 DT1 DT2 DT3 DT4 DT5 DT6 DT7 DT8 DT9 DT12 DT13 DT14 DT15 DT16 DT17 DT18 DT19 DT20 DT21 DT22
Ligands
Unit 9 ZN701
Unit 10 ZN701
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany