4GKB - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A SHORT CHAIN DEHYDROGENASE HOMOLOG (TA 505321) FROM BURKHOLDERIA MULTIVORANS, UNLIGANDED STRUCTURE
• Keywords: PUTATIVE SUGAR DEHYDROGENASE, ENZYME FUNCTION INITIATIVE, EF STRUCTURAL GENOMICS, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4GKB	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	A	247	1853	0
2	Protein	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	B	258	1950	0
3	Protein	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	C	258	1950	0
4	Protein	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	D	250	1886	0
5	Ligand	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	A	3	0	3
6	Ligand	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	B	3	0	9
7	Ligand	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	C	3	0	3
8	Ligand	3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE	D	3	0	6
9	Water			1070	0	1070
total				2095	7639	1091

Proteins

Unit 1	MET 1 ASP 2 LEU 3 ASN 4 LEU 5 GLN 6 ASP 7 LYS 8 VAL 9 VAL 10 ILE 11 VAL 12 THR 13 GLY 14 GLY 15 ALA 16 SER 17 GLY 18 ILE 19 GLY 20 GLY 21 ALA 22 ILE 23 SER 24 MET 25 ARG 26 LEU 27 ALA 28 GLU 29 GLU 30 ARG 31 ALA 32 ILE 33 PRO 34 VAL 35 VAL 36 PHE 37 ALA 38 ARG 39 HIS 40 ALA 41 PRO 42 ASP 43 GLY 44 ALA 45 PHE 46 LEU 47 ASP 48 ALA 49 LEU 50 ALA 51 GLN 52 ARG 53 GLN 54 PRO 55 ARG 56 ALA 57 THR 58 TYR 59 LEU 60 PRO 61 VAL 62 GLU 63 LEU 64 GLN 65 ASP 66 ASP 67 ALA 68 GLN 69 CYS 70 ARG 71 ASP 72 ALA 73 VAL 74 ALA 75 GLN 76 THR 77 ILE 78 ALA 79 THR 80 PHE 81 GLY 82 ARG 83 LEU 84 ASP 85 GLY 86 LEU 87 VAL 88 ASN 89 ASN 90 ALA 91 GLY 92 VAL 93 ASN 94 ASP 95 GLY 96 ILE 97 GLY 98 LEU 99 ASP 100 ALA 101 GLY 102 ARG 103 ASP 104 ALA 105 PHE 106 VAL 107 ALA 108 SER 109 LEU 110 GLU 111 ARG 112 ASN 113 LEU 114 ILE 115 HIS 116 TYR 117 TYR 118 ALA 119 MET 120 ALA 121 HIS 122 TYR 123 CYS 124 VAL 125 PRO 126 HIS 127 LEU 128 LYS 129 ALA 130 THR 131 ARG 132 GLY 133 ALA 134 ILE 135 VAL 136 ASN 137 ILE 138 SER 139 SER 140 LYS 141 THR 142 ALA 143 VAL 144 THR 145 GLY 146 GLN 147 GLY 148 ASN 149 THR 150 SER 151 GLY 152 TYR 153 CYS 154 ALA 155 SER 156 LYS 157 GLY 158 ALA 159 GLN 160 LEU 161 ALA 162 LEU 163 THR 164 ARG 165 GLU 166 TRP 167 ALA 168 VAL 169 ALA 170 LEU 171 ARG 172 GLU 173 HIS 174 GLY 175 VAL 176 ARG 177 VAL 178 ASN 179 ALA 180 VAL 181 ILE 182 PRO 183 ALA 184 GLU 185 VAL 186 MET 187 THR 188 PRO 189 LEU 190 TYR 191 ALA 203 LYS 204 LEU 205 ALA 206 GLU 207 ILE 208 ALA 209 ALA 210 LYS 211 VAL 212 PRO 213 LEU 214 GLY 215 ARG 216 ARG 217 PHE 218 THR 219 THR 220 PRO 221 ASP 222 GLU 223 ILE 224 ALA 225 ASP 226 THR 227 ALA 228 VAL 229 PHE 230 LEU 231 LEU 232 SER 233 PRO 234 ARG 235 ALA 236 SER 237 HIS 238 THR 239 THR 240 GLY 241 GLU 242 TRP 243 LEU 244 PHE 245 VAL 246 ASP 247 GLY 248 GLY 249 TYR 250 THR 251 HIS 252 LEU 253 ASP 254 ARG 255 ALA 256 LEU 257 VAL 258
Unit 2	MET 1 ASP 2 LEU 3 ASN 4 LEU 5 GLN 6 ASP 7 LYS 8 VAL 9 VAL 10 ILE 11 VAL 12 THR 13 GLY 14 GLY 15 ALA 16 SER 17 GLY 18 ILE 19 GLY 20 GLY 21 ALA 22 ILE 23 SER 24 MET 25 ARG 26 LEU 27 ALA 28 GLU 29 GLU 30 ARG 31 ALA 32 ILE 33 PRO 34 VAL 35 VAL 36 PHE 37 ALA 38 ARG 39 HIS 40 ALA 41 PRO 42 ASP 43 GLY 44 ALA 45 PHE 46 LEU 47 ASP 48 ALA 49 LEU 50 ALA 51 GLN 52 ARG 53 GLN 54 PRO 55 ARG 56 ALA 57 THR 58 TYR 59 LEU 60 PRO 61 VAL 62 GLU 63 LEU 64 GLN 65 ASP 66 ASP 67 ALA 68 GLN 69 CYS 70 ARG 71 ASP 72 ALA 73 VAL 74 ALA 75 GLN 76 THR 77 ILE 78 ALA 79 THR 80 PHE 81 GLY 82 ARG 83 LEU 84 ASP 85 GLY 86 LEU 87 VAL 88 ASN 89 ASN 90 ALA 91 GLY 92 VAL 93 ASN 94 ASP 95 GLY 96 ILE 97 GLY 98 LEU 99 ASP 100 ALA 101 GLY 102 ARG 103 ASP 104 ALA 105 PHE 106 VAL 107 ALA 108 SER 109 LEU 110 GLU 111 ARG 112 ASN 113 LEU 114 ILE 115 HIS 116 TYR 117 TYR 118 ALA 119 MET 120 ALA 121 HIS 122 TYR 123 CYS 124 VAL 125 PRO 126 HIS 127 LEU 128 LYS 129 ALA 130 THR 131 ARG 132 GLY 133 ALA 134 ILE 135 VAL 136 ASN 137 ILE 138 SER 139 SER 140 LYS 141 THR 142 ALA 143 VAL 144 THR 145 GLY 146 GLN 147 GLY 148 ASN 149 THR 150 SER 151 GLY 152 TYR 153 CYS 154 ALA 155 SER 156 LYS 157 GLY 158 ALA 159 GLN 160 LEU 161 ALA 162 LEU 163 THR 164 ARG 165 GLU 166 TRP 167 ALA 168 VAL 169 ALA 170 LEU 171 ARG 172 GLU 173 HIS 174 GLY 175 VAL 176 ARG 177 VAL 178 ASN 179 ALA 180 VAL 181 ILE 182 PRO 183 ALA 184 GLU 185 VAL 186 MET 187 THR 188 PRO 189 LEU 190 TYR 191 ARG 192 ASN 193 TRP 194 ILE 195 ALA 196 THR 197 PHE 198 GLU 199 ASP 200 PRO 201 GLU 202 ALA 203 LYS 204 LEU 205 ALA 206 GLU 207 ILE 208 ALA 209 ALA 210 LYS 211 VAL 212 PRO 213 LEU 214 GLY 215 ARG 216 ARG 217 PHE 218 THR 219 THR 220 PRO 221 ASP 222 GLU 223 ILE 224 ALA 225 ASP 226 THR 227 ALA 228 VAL 229 PHE 230 LEU 231 LEU 232 SER 233 PRO 234 ARG 235 ALA 236 SER 237 HIS 238 THR 239 THR 240 GLY 241 GLU 242 TRP 243 LEU 244 PHE 245 VAL 246 ASP 247 GLY 248 GLY 249 TYR 250 THR 251 HIS 252 LEU 253 ASP 254 ARG 255 ALA 256 LEU 257 VAL 258
Unit 3	MET 1 ASP 2 LEU 3 ASN 4 LEU 5 GLN 6 ASP 7 LYS 8 VAL 9 VAL 10 ILE 11 VAL 12 THR 13 GLY 14 GLY 15 ALA 16 SER 17 GLY 18 ILE 19 GLY 20 GLY 21 ALA 22 ILE 23 SER 24 MET 25 ARG 26 LEU 27 ALA 28 GLU 29 GLU 30 ARG 31 ALA 32 ILE 33 PRO 34 VAL 35 VAL 36 PHE 37 ALA 38 ARG 39 HIS 40 ALA 41 PRO 42 ASP 43 GLY 44 ALA 45 PHE 46 LEU 47 ASP 48 ALA 49 LEU 50 ALA 51 GLN 52 ARG 53 GLN 54 PRO 55 ARG 56 ALA 57 THR 58 TYR 59 LEU 60 PRO 61 VAL 62 GLU 63 LEU 64 GLN 65 ASP 66 ASP 67 ALA 68 GLN 69 CYS 70 ARG 71 ASP 72 ALA 73 VAL 74 ALA 75 GLN 76 THR 77 ILE 78 ALA 79 THR 80 PHE 81 GLY 82 ARG 83 LEU 84 ASP 85 GLY 86 LEU 87 VAL 88 ASN 89 ASN 90 ALA 91 GLY 92 VAL 93 ASN 94 ASP 95 GLY 96 ILE 97 GLY 98 LEU 99 ASP 100 ALA 101 GLY 102 ARG 103 ASP 104 ALA 105 PHE 106 VAL 107 ALA 108 SER 109 LEU 110 GLU 111 ARG 112 ASN 113 LEU 114 ILE 115 HIS 116 TYR 117 TYR 118 ALA 119 MET 120 ALA 121 HIS 122 TYR 123 CYS 124 VAL 125 PRO 126 HIS 127 LEU 128 LYS 129 ALA 130 THR 131 ARG 132 GLY 133 ALA 134 ILE 135 VAL 136 ASN 137 ILE 138 SER 139 SER 140 LYS 141 THR 142 ALA 143 VAL 144 THR 145 GLY 146 GLN 147 GLY 148 ASN 149 THR 150 SER 151 GLY 152 TYR 153 CYS 154 ALA 155 SER 156 LYS 157 GLY 158 ALA 159 GLN 160 LEU 161 ALA 162 LEU 163 THR 164 ARG 165 GLU 166 TRP 167 ALA 168 VAL 169 ALA 170 LEU 171 ARG 172 GLU 173 HIS 174 GLY 175 VAL 176 ARG 177 VAL 178 ASN 179 ALA 180 VAL 181 ILE 182 PRO 183 ALA 184 GLU 185 VAL 186 MET 187 THR 188 PRO 189 LEU 190 TYR 191 ARG 192 ASN 193 TRP 194 ILE 195 ALA 196 THR 197 PHE 198 GLU 199 ASP 200 PRO 201 GLU 202 ALA 203 LYS 204 LEU 205 ALA 206 GLU 207 ILE 208 ALA 209 ALA 210 LYS 211 VAL 212 PRO 213 LEU 214 GLY 215 ARG 216 ARG 217 PHE 218 THR 219 THR 220 PRO 221 ASP 222 GLU 223 ILE 224 ALA 225 ASP 226 THR 227 ALA 228 VAL 229 PHE 230 LEU 231 LEU 232 SER 233 PRO 234 ARG 235 ALA 236 SER 237 HIS 238 THR 239 THR 240 GLY 241 GLU 242 TRP 243 LEU 244 PHE 245 VAL 246 ASP 247 GLY 248 GLY 249 TYR 250 THR 251 HIS 252 LEU 253 ASP 254 ARG 255 ALA 256 LEU 257 VAL 258
Unit 4	MET 1 ASP 2 LEU 3 ASN 4 LEU 5 GLN 6 ASP 7 LYS 8 VAL 9 VAL 10 ILE 11 VAL 12 THR 13 GLY 14 GLY 15 ALA 16 SER 17 GLY 18 ILE 19 GLY 20 GLY 21 ALA 22 ILE 23 SER 24 MET 25 ARG 26 LEU 27 ALA 28 GLU 29 GLU 30 ARG 31 ALA 32 ILE 33 PRO 34 VAL 35 VAL 36 PHE 37 ALA 38 ARG 39 HIS 40 ALA 41 PRO 42 ASP 43 GLY 44 ALA 45 PHE 46 LEU 47 ASP 48 ALA 49 LEU 50 ALA 51 GLN 52 ARG 53 GLN 54 PRO 55 ARG 56 ALA 57 THR 58 TYR 59 LEU 60 PRO 61 VAL 62 GLU 63 LEU 64 GLN 65 ASP 66 ASP 67 ALA 68 GLN 69 CYS 70 ARG 71 ASP 72 ALA 73 VAL 74 ALA 75 GLN 76 THR 77 ILE 78 ALA 79 THR 80 PHE 81 GLY 82 ARG 83 LEU 84 ASP 85 GLY 86 LEU 87 VAL 88 ASN 89 ASN 90 ALA 91 GLY 92 VAL 93 ASN 94 ASP 95 GLY 96 ILE 97 GLY 98 LEU 99 ASP 100 ALA 101 GLY 102 ARG 103 ASP 104 ALA 105 PHE 106 VAL 107 ALA 108 SER 109 LEU 110 GLU 111 ARG 112 ASN 113 LEU 114 ILE 115 HIS 116 TYR 117 TYR 118 ALA 119 MET 120 ALA 121 HIS 122 TYR 123 CYS 124 VAL 125 PRO 126 HIS 127 LEU 128 LYS 129 ALA 130 THR 131 ARG 132 GLY 133 ALA 134 ILE 135 VAL 136 ASN 137 ILE 138 SER 139 SER 140 LYS 141 THR 142 ALA 143 VAL 144 THR 145 GLY 146 GLN 147 GLY 148 ASN 149 THR 150 SER 151 GLY 152 TYR 153 CYS 154 ALA 155 SER 156 LYS 157 GLY 158 ALA 159 GLN 160 LEU 161 ALA 162 LEU 163 THR 164 ARG 165 GLU 166 TRP 167 ALA 168 VAL 169 ALA 170 LEU 171 ARG 172 GLU 173 HIS 174 GLY 175 VAL 176 ARG 177 VAL 178 ASN 179 ALA 180 VAL 181 ILE 182 PRO 183 ALA 184 GLU 185 VAL 186 MET 187 THR 188 PRO 189 LEU 190 TYR 191 ARG 192 ASN 193 TRP 194 ALA 203 LYS 204 LEU 205 ALA 206 GLU 207 ILE 208 ALA 209 ALA 210 LYS 211 VAL 212 PRO 213 LEU 214 GLY 215 ARG 216 ARG 217 PHE 218 THR 219 THR 220 PRO 221 ASP 222 GLU 223 ILE 224 ALA 225 ASP 226 THR 227 ALA 228 VAL 229 PHE 230 LEU 231 LEU 232 SER 233 PRO 234 ARG 235 ALA 236 SER 237 HIS 238 THR 239 THR 240 GLY 241 GLU 242 TRP 243 LEU 244 PHE 245 VAL 246 ASP 247 GLY 248 GLY 249 TYR 250 THR 251 HIS 252 LEU 253 ASP 254 ARG 255 ALA 256 LEU 257 VAL 258

Ligands

Unit 5	CL 301 CA 302 CL 303
Unit 6	CA 301 EDO 302 EDO 303
Unit 7	CA 301 CL 302 CL 303
Unit 8	CL 301 CL 302 EDO 303