4GF9 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURAL INSIGHTS INTO THE DUAL STRATEGY OF RECOGNITION OF PEPTIDOGLYCAN RECOGNITION PROTEIN, PGRP-S: TERNARY COMPLEX WITH LPS AND FATTY ACID
• Keywords: PEPTIDOGLYCAN BINDING, IMMUNE RESPONSE, SECRETED, ANTIMICROB PGRP, ANTIBIOTIC, ANTIMICROBIAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4GF9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	A	171	1336	0
2	Protein	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	B	171	1336	0
3	Protein	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	C	171	1336	0
4	Protein	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	D	171	1336	0
5	Ligand	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	B	1	0	20
6	Ligand	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	C	1	0	48
7	Ligand	PEPTIDOGLYCAN RECOGNITION PROTEIN 1	D	1	0	6
8	Water			255	0	255
total				942	5344	329

Proteins

Unit 1	GLU 1 ASP 2 PRO 3 PRO 4 ALA 5 CYS 6 GLY 7 SER 8 ILE 9 VAL 10 PRO 11 ARG 12 ARG 13 GLU 14 TRP 15 ARG 16 ALA 17 LEU 18 ALA 19 SER 20 GLU 21 CYS 22 ARG 23 GLU 24 ARG 25 LEU 26 THR 27 ARG 28 PRO 29 VAL 30 ARG 31 TYR 32 VAL 33 VAL 34 VAL 35 SER 36 HIS 37 THR 38 ALA 39 GLY 40 SER 41 HIS 42 CYS 43 ASP 44 THR 45 PRO 46 ALA 47 SER 48 CYS 49 ALA 50 GLN 51 GLN 52 ALA 53 GLN 54 ASN 55 VAL 56 GLN 57 SER 58 TYR 59 HIS 60 VAL 61 ARG 62 ASN 63 LEU 64 GLY 65 TRP 66 CYS 67 ASP 68 VAL 69 GLY 70 TYR 71 ASN 72 PHE 73 LEU 74 ILE 75 GLY 76 GLU 77 ASP 78 GLY 79 LEU 80 VAL 81 TYR 82 GLU 83 GLY 84 ARG 85 GLY 86 TRP 87 ASN 88 ILE 89 LYS 90 GLY 91 ALA 92 HIS 93 ALA 94 GLY 95 PRO 96 THR 97 TRP 98 ASN 99 PRO 100 ILE 101 SER 102 ILE 103 GLY 104 ILE 105 SER 106 PHE 107 MET 108 GLY 109 ASN 110 TYR 111 MET 112 ASN 113 ARG 114 VAL 115 PRO 116 PRO 117 PRO 118 ARG 119 ALA 120 LEU 121 ARG 122 ALA 123 ALA 124 GLN 125 ASN 126 LEU 127 LEU 128 ALA 129 CYS 130 GLY 131 VAL 132 ALA 133 LEU 134 GLY 135 ALA 136 LEU 137 ARG 138 SER 139 ASN 140 TYR 141 GLU 142 VAL 143 LYS 144 GLY 145 HIS 146 ARG 147 ASP 148 VAL 149 GLN 150 PRO 151 THR 152 LEU 153 SER 154 PRO 155 GLY 156 ASP 157 ARG 158 LEU 159 TYR 160 GLU 161 ILE 162 ILE 163 GLN 164 THR 165 TRP 166 SER 167 HIS 168 TYR 169 ARG 170 ALA 171
Unit 2	GLU 1 ASP 2 PRO 3 PRO 4 ALA 5 CYS 6 GLY 7 SER 8 ILE 9 VAL 10 PRO 11 ARG 12 ARG 13 GLU 14 TRP 15 ARG 16 ALA 17 LEU 18 ALA 19 SER 20 GLU 21 CYS 22 ARG 23 GLU 24 ARG 25 LEU 26 THR 27 ARG 28 PRO 29 VAL 30 ARG 31 TYR 32 VAL 33 VAL 34 VAL 35 SER 36 HIS 37 THR 38 ALA 39 GLY 40 SER 41 HIS 42 CYS 43 ASP 44 THR 45 PRO 46 ALA 47 SER 48 CYS 49 ALA 50 GLN 51 GLN 52 ALA 53 GLN 54 ASN 55 VAL 56 GLN 57 SER 58 TYR 59 HIS 60 VAL 61 ARG 62 ASN 63 LEU 64 GLY 65 TRP 66 CYS 67 ASP 68 VAL 69 GLY 70 TYR 71 ASN 72 PHE 73 LEU 74 ILE 75 GLY 76 GLU 77 ASP 78 GLY 79 LEU 80 VAL 81 TYR 82 GLU 83 GLY 84 ARG 85 GLY 86 TRP 87 ASN 88 ILE 89 LYS 90 GLY 91 ALA 92 HIS 93 ALA 94 GLY 95 PRO 96 THR 97 TRP 98 ASN 99 PRO 100 ILE 101 SER 102 ILE 103 GLY 104 ILE 105 SER 106 PHE 107 MET 108 GLY 109 ASN 110 TYR 111 MET 112 ASN 113 ARG 114 VAL 115 PRO 116 PRO 117 PRO 118 ARG 119 ALA 120 LEU 121 ARG 122 ALA 123 ALA 124 GLN 125 ASN 126 LEU 127 LEU 128 ALA 129 CYS 130 GLY 131 VAL 132 ALA 133 LEU 134 GLY 135 ALA 136 LEU 137 ARG 138 SER 139 ASN 140 TYR 141 GLU 142 VAL 143 LYS 144 GLY 145 HIS 146 ARG 147 ASP 148 VAL 149 GLN 150 PRO 151 THR 152 LEU 153 SER 154 PRO 155 GLY 156 ASP 157 ARG 158 LEU 159 TYR 160 GLU 161 ILE 162 ILE 163 GLN 164 THR 165 TRP 166 SER 167 HIS 168 TYR 169 ARG 170 ALA 171
Unit 3	GLU 1 ASP 2 PRO 3 PRO 4 ALA 5 CYS 6 GLY 7 SER 8 ILE 9 VAL 10 PRO 11 ARG 12 ARG 13 GLU 14 TRP 15 ARG 16 ALA 17 LEU 18 ALA 19 SER 20 GLU 21 CYS 22 ARG 23 GLU 24 ARG 25 LEU 26 THR 27 ARG 28 PRO 29 VAL 30 ARG 31 TYR 32 VAL 33 VAL 34 VAL 35 SER 36 HIS 37 THR 38 ALA 39 GLY 40 SER 41 HIS 42 CYS 43 ASP 44 THR 45 PRO 46 ALA 47 SER 48 CYS 49 ALA 50 GLN 51 GLN 52 ALA 53 GLN 54 ASN 55 VAL 56 GLN 57 SER 58 TYR 59 HIS 60 VAL 61 ARG 62 ASN 63 LEU 64 GLY 65 TRP 66 CYS 67 ASP 68 VAL 69 GLY 70 TYR 71 ASN 72 PHE 73 LEU 74 ILE 75 GLY 76 GLU 77 ASP 78 GLY 79 LEU 80 VAL 81 TYR 82 GLU 83 GLY 84 ARG 85 GLY 86 TRP 87 ASN 88 ILE 89 LYS 90 GLY 91 ALA 92 HIS 93 ALA 94 GLY 95 PRO 96 THR 97 TRP 98 ASN 99 PRO 100 ILE 101 SER 102 ILE 103 GLY 104 ILE 105 SER 106 PHE 107 MET 108 GLY 109 ASN 110 TYR 111 MET 112 ASN 113 ARG 114 VAL 115 PRO 116 PRO 117 PRO 118 ARG 119 ALA 120 LEU 121 ARG 122 ALA 123 ALA 124 GLN 125 ASN 126 LEU 127 LEU 128 ALA 129 CYS 130 GLY 131 VAL 132 ALA 133 LEU 134 GLY 135 ALA 136 LEU 137 ARG 138 SER 139 ASN 140 TYR 141 GLU 142 VAL 143 LYS 144 GLY 145 HIS 146 ARG 147 ASP 148 VAL 149 GLN 150 PRO 151 THR 152 LEU 153 SER 154 PRO 155 GLY 156 ASP 157 ARG 158 LEU 159 TYR 160 GLU 161 ILE 162 ILE 163 GLN 164 THR 165 TRP 166 SER 167 HIS 168 TYR 169 ARG 170 ALA 171
Unit 4	GLU 1 ASP 2 PRO 3 PRO 4 ALA 5 CYS 6 GLY 7 SER 8 ILE 9 VAL 10 PRO 11 ARG 12 ARG 13 GLU 14 TRP 15 ARG 16 ALA 17 LEU 18 ALA 19 SER 20 GLU 21 CYS 22 ARG 23 GLU 24 ARG 25 LEU 26 THR 27 ARG 28 PRO 29 VAL 30 ARG 31 TYR 32 VAL 33 VAL 34 VAL 35 SER 36 HIS 37 THR 38 ALA 39 GLY 40 SER 41 HIS 42 CYS 43 ASP 44 THR 45 PRO 46 ALA 47 SER 48 CYS 49 ALA 50 GLN 51 GLN 52 ALA 53 GLN 54 ASN 55 VAL 56 GLN 57 SER 58 TYR 59 HIS 60 VAL 61 ARG 62 ASN 63 LEU 64 GLY 65 TRP 66 CYS 67 ASP 68 VAL 69 GLY 70 TYR 71 ASN 72 PHE 73 LEU 74 ILE 75 GLY 76 GLU 77 ASP 78 GLY 79 LEU 80 VAL 81 TYR 82 GLU 83 GLY 84 ARG 85 GLY 86 TRP 87 ASN 88 ILE 89 LYS 90 GLY 91 ALA 92 HIS 93 ALA 94 GLY 95 PRO 96 THR 97 TRP 98 ASN 99 PRO 100 ILE 101 SER 102 ILE 103 GLY 104 ILE 105 SER 106 PHE 107 MET 108 GLY 109 ASN 110 TYR 111 MET 112 ASN 113 ARG 114 VAL 115 PRO 116 PRO 117 PRO 118 ARG 119 ALA 120 LEU 121 ARG 122 ALA 123 ALA 124 GLN 125 ASN 126 LEU 127 LEU 128 ALA 129 CYS 130 GLY 131 VAL 132 ALA 133 LEU 134 GLY 135 ALA 136 LEU 137 ARG 138 SER 139 ASN 140 TYR 141 GLU 142 VAL 143 LYS 144 GLY 145 HIS 146 ARG 147 ASP 148 VAL 149 GLN 150 PRO 151 THR 152 LEU 153 SER 154 PRO 155 GLY 156 ASP 157 ARG 158 LEU 159 TYR 160 GLU 161 ILE 162 ILE 163 GLN 164 THR 165 TRP 166 SER 167 HIS 168 TYR 169 ARG 170 ALA 171

Ligands

Unit 5	STE 201
Unit 6	LP5 501
Unit 7	GOL 201