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Sequence, Chains, Asymmetric and Biological Units

Title N-TERMINAL DOMAIN OF VDUP-1
Keywords ALPHA-ARRESTIN, OXIDATIVE STRESS, METABOLISM, THIOREDOXIN, P BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4GEJ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   THIOREDOXIN-INTERACTING PROTEIN  A 134 1077 0
2  Protein   THIOREDOXIN-INTERACTING PROTEIN  B 136 1094 0
3  Protein   THIOREDOXIN-INTERACTING PROTEIN  C 136 1094 0
4  Protein   THIOREDOXIN-INTERACTING PROTEIN  D 131 1049 0
5  Protein   THIOREDOXIN-INTERACTING PROTEIN  E 142 1138 0
6  Protein   THIOREDOXIN-INTERACTING PROTEIN  F 136 1094 0
7  Protein   THIOREDOXIN-INTERACTING PROTEIN  G 136 1094 0
8  Protein   THIOREDOXIN-INTERACTING PROTEIN  H 139 1116 0
9  Protein   THIOREDOXIN-INTERACTING PROTEIN  I 142 1138 0
10  Protein   THIOREDOXIN-INTERACTING PROTEIN  J 129 1039 0
11  Ligand   THIOREDOXIN-INTERACTING PROTEIN  A 1 0 1
12  Ligand   THIOREDOXIN-INTERACTING PROTEIN  C 1 0 1
13  Ligand   THIOREDOXIN-INTERACTING PROTEIN  D 1 0 1
14  Ligand   THIOREDOXIN-INTERACTING PROTEIN  H 1 0 1
15  Ligand   THIOREDOXIN-INTERACTING PROTEIN  I 1 0 1
total       1366 10933 5

Proteins
Unit 1 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 2 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 3 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 4 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 5 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLN81 PRO82 THR83 GLY84 GLU85 ASN86 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 6 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 7 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 8 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLN81 PRO82 THR83 GLY84 GLU85 ASN86 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 9 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLN81 PRO82 THR83 GLY84 GLU85 ASN86 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER113 PHE114 LYS115 GLY116 LYS117 TYR118 GLY119 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149
Unit 10 LYS8 SER9 PHE10 GLU11 VAL12 VAL13 PHE14 ASN15 ASP16 PRO17 GLU18 LYS19 VAL20 TYR21 GLY22 SER23 GLY24 GLU25 ARG26 VAL27 ALA28 GLY29 ARG30 VAL31 ILE32 VAL33 GLU34 VAL35 SER36 GLU37 VAL38 THR39 ARG40 VAL41 LYS42 ALA43 VAL44 ARG45 ILE46 LEU47 ALA48 SER49 GLY50 VAL51 ALA52 LYS53 VAL54 LEU55 TRP56 MET57 GLN58 GLY59 SER60 GLN61 GLN62 CYS63 LYS64 GLN65 THR66 SER67 GLU68 TYR69 LEU70 ARG71 TYR72 GLU73 ASP74 THR75 LEU76 LEU77 LEU78 GLU79 ASP80 GLU87 MET88 VAL89 ILE90 MET91 ARG92 PRO93 GLY94 ASN95 LYS96 TYR97 GLU98 TYR99 LYS100 PHE101 GLY102 PHE103 GLU104 LEU105 PRO106 GLN107 GLY108 PRO109 LEU110 GLY111 THR112 SER120 VAL121 ASP122 TYR123 TRP124 VAL125 LYS126 ALA127 PHE128 LEU129 ASP130 ARG131 PRO132 SER133 GLN134 PRO135 THR136 GLN137 GLU138 THR139 LYS140 LYS141 ASN142 PHE143 GLU144 VAL145 VAL146 ASP147 LEU148 VAL149

Ligands
Unit 11 CA201
Unit 12 CA201
Unit 13 CA201
Unit 14 CA201
Unit 15 CA201

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany