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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF NO-DNA FACTOR
Keywords DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4GCL     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOID OCCLUSION FACTOR SLMA  A 190 1535 0
2  Protein   NUCLEOID OCCLUSION FACTOR SLMA  B 196 1587 0
3  Protein   NUCLEOID OCCLUSION FACTOR SLMA  C 190 1541 0
4  Protein   NUCLEOID OCCLUSION FACTOR SLMA  D 189 1530 0
5  Protein   NUCLEOID OCCLUSION FACTOR SLMA  E 190 1541 0
6  Protein   NUCLEOID OCCLUSION FACTOR SLMA  F 189 1530 0
7  Protein   NUCLEOID OCCLUSION FACTOR SLMA  G 190 1541 0
8  Protein   NUCLEOID OCCLUSION FACTOR SLMA  H 190 1541 0
9  Other macromolecule    W 14 284 0
10  Other macromolecule    Z 14 284 0
11  Other macromolecule    R 14 284 0
12  Other macromolecule    T 14 284 0
13  Ligand   NUCLEOID OCCLUSION FACTOR SLMA  A 1 0 12
14  Ligand   NUCLEOID OCCLUSION FACTOR SLMA  C 1 0 12
15  Ligand   NUCLEOID OCCLUSION FACTOR SLMA  E 1 0 12
16  Ligand   NUCLEOID OCCLUSION FACTOR SLMA  F 1 0 12
17 Water     392 0 392
total       1976 13482 440

Proteins
Unit 1 ARG9 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 2 ALA3 GLU4 LYS5 GLN6 ALA7 LYS8 ARG9 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 3 ARG9 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 4 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 5 ARG9 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 6 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 7 ARG9 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198
Unit 8 ARG9 ASN10 ARG11 ARG12 GLU13 GLU14 ILE15 LEU16 GLN17 SER18 LEU19 ALA20 LEU21 MET22 LEU23 GLU24 SER25 SER26 ASP27 GLY28 SER29 GLN30 ARG31 ILE32 THR33 THR34 ALA35 LYS36 LEU37 ALA38 ALA39 SER40 VAL41 GLY42 VAL43 SER44 GLU45 ALA46 ALA47 LEU48 TYR49 ARG50 HIS51 PHE52 PRO53 SER54 LYS55 THR56 ARG57 MET58 PHE59 ASP60 SER61 LEU62 ILE63 GLU64 PHE65 ILE66 GLU67 ASP68 SER69 LEU70 ILE71 THR72 ARG73 ILE74 ASN75 LEU76 ILE77 LEU78 LYS79 ASP80 GLU81 LYS82 ASP83 THR84 THR85 ALA86 ARG87 LEU88 ARG89 LEU90 ILE91 VAL92 LEU93 LEU94 LEU95 LEU96 GLY97 PHE98 GLY99 GLU100 ARG101 ASN102 PRO103 GLY104 LEU105 THR106 ARG107 ILE108 LEU109 THR110 GLY111 HIS112 ALA113 LEU114 MET115 PHE116 GLU117 GLN118 ASP119 ARG120 LEU121 GLN122 GLY123 ARG124 ILE125 ASN126 GLN127 LEU128 PHE129 GLU130 ARG131 ILE132 GLU133 ALA134 GLN135 LEU136 ARG137 GLN138 VAL139 LEU140 ARG141 GLU142 LYS143 ARG144 MET145 ARG146 GLU147 GLY148 GLU149 GLY150 TYR151 ALA152 THR153 ASP154 GLU155 THR156 LEU157 LEU158 ALA159 SER160 GLN161 ILE162 LEU163 ALA164 PHE165 CYS166 GLU167 GLY168 MET169 LEU170 SER171 ARG172 PHE173 VAL174 ARG175 SER176 GLU177 PHE178 LYS179 TYR180 ARG181 PRO182 THR183 ASP184 ASP185 PHE186 ASP187 ALA188 ARG189 TRP190 PRO191 LEU192 ILE193 ALA194 ALA195 GLN196 LEU197 GLN198

Other macromolecules
Unit 9 DA1 DG2 DT3 DG4 DA5 DG6 DT7 DA8 DC9 DT10 DC11 DA12 DC13 DT14
Unit 10 DA22 DG23 DT24 DG25 DA26 DG27 DT28 DA29 DC30 DT31 DC32 DA33 DC34 DT35
Unit 11 DA1 DG2 DT3 DG4 DA5 DG6 DT7 DA8 DC9 DT10 DC11 DA12 DC13 DT14
Unit 12 DA22 DG23 DT24 DG25 DA26 DG27 DT28 DA29 DC30 DT31 DC32 DA33 DC34 DT35

Ligands
Unit 13 MES201
Unit 14 MES201
Unit 15 MES201
Unit 16 MES201

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany