4GAG - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE BROADLY NEUTRALIZING ANTIBODY AP33 IN COMPL ITS HCV EPITOPE (E2 RESIDUES 412-423)
• Keywords: ANTIBODY FAB, NEUTRALIZING ANTIBODY, HCV E2 BINDING, IMMUNE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4GAG	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN	H	212	1629	0
2	Protein	NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN	L	215	1659	0
3	Protein	GENOME POLYPROTEIN	P	12	88	8
4	Ligand	NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN	H	2	0	12
5	Water			346	0	346
total				787	3376	366

Proteins

Unit 1	GLU 1 VAL 2 GLN 3 LEU 4 GLN 5 GLU 6 SER 7 GLY 8 PRO 9 SER 10 LEU 11 VAL 12 LYS 13 PRO 14 SER 15 GLN 16 THR 17 LEU 18 SER 19 LEU 20 THR 21 CYS 22 SER 23 VAL 24 THR 25 GLY 26 ASP 27 SER 28 ILE 29 THR 30 SER 31 GLY 32 TYR 33 TRP 34 ASN 35 TRP 36 ILE 37 ARG 38 LYS 39 PHE 40 PRO 41 GLY 42 ASN 43 LYS 44 LEU 45 GLU 46 TYR 47 MET 48 GLY 49 TYR 50 ILE 51 SER 52 TYR 53 SER 54 GLY 55 SER 56 THR 57 TYR 58 TYR 59 ASN 60 LEU 61 SER 62 LEU 63 ARG 64 SER 65 ARG 66 ILE 67 SER 68 ILE 69 THR 70 ARG 71 ASP 72 THR 73 SER 74 LYS 75 ASN 76 GLN 77 TYR 78 TYR 79 LEU 80 GLN 81 LEU 82 ASN 82A SER 82B VAL 82C THR 83 THR 84 GLU 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 TYR 91 CYS 92 ALA 93 LEU 94 ILE 95 THR 96 THR 97 THR 98 THR 99 TYR 100 ALA 100A MET 100B ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 PRO 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 ASN 133 SER 134 MET 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 SER 158 LEU 159 SER 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 ASP 173 LEU 174 TYR 175 THR 176 LEU 177 SER 178 SER 179 SER 180 VAL 181 THR 182 VAL 183 PRO 184 SER 185 SER 186 THR 187 TRP 188 PRO 189 SER 190 GLU 191 THR 192 VAL 193 THR 194 CYS 195 ASN 196 VAL 197 ALA 198 HIS 199 PRO 200 ALA 201 SER 202 SER 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 ILE 210 VAL 211 PRO 212 ARG 213
Unit 2	ASN 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 VAL 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 LEU 15 GLY 16 GLN 17 ARG 18 ALA 19 THR 20 ILE 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLU 27 SER 27A VAL 27B ASP 27C GLY 27D TYR 28 GLY 29 ASN 30 SER 31 PHE 32 LEU 33 HIS 34 TRP 35 PHE 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 PRO 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 LEU 50 ALA 51 SER 52 ASN 53 LEU 54 ASN 55 SER 56 GLY 57 VAL 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 ARG 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 ASP 76 PRO 77 VAL 78 GLU 79 ALA 80 ASP 81 ASP 82 ALA 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 ASN 91 ASN 92 VAL 93 ASP 94 PRO 95 TRP 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211
Unit 3	PCA 412 LEU 413 ILE 414 ASN 415 THR 416 ASN 417 GLY 418 SER 419 TRP 420 HIS 421 VAL 422 ASN 423

Ligands

Unit 4

GOL 301 GOL 302