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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE MURINE CYTOMEGALOVIRUS MHC-I HOMOLO WITH LIGAND RAE-1 GAMMA
Keywords MHC-I FOLD, IMMUNOEVASION, STRESS INDUCED LIGAND, IMMUNE SYS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4G59     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RETINOIC ACID EARLY-INDUCIBLE PROTEIN 1-GAMMA  A 162 1312 0
2  Protein   M152 PROTEIN  C 264 2142 0
3  Protein   RETINOIC ACID EARLY-INDUCIBLE PROTEIN 1-GAMMA  B 163 1319 0
4  Protein   M152 PROTEIN  D 264 2142 0
5  Ligand   M152 PROTEIN  C 2 0 28
6  Ligand   M152 PROTEIN  D 2 0 28
7 Water     75 0 75
total       932 6915 131

Proteins
Unit 1 ALA2 HIS3 SER4 LEU5 ARG6 CYS7 ASN8 LEU9 THR10 ILE11 LYS12 ALA13 PRO14 THR15 PRO16 ALA17 ASP18 PRO19 LEU20 TRP21 TYR22 GLU23 ALA24 LYS25 CYS26 LEU27 VAL28 ASP29 GLU30 ILE31 LEU32 ILE33 LEU34 HIS35 LEU36 SER37 ASN38 ILE39 ASN40 LYS41 ALA52 ASN53 ALA54 THR55 GLU56 VAL57 GLY58 GLU59 CYS60 LEU61 THR62 GLN63 PRO64 VAL65 ASN66 ASP67 LEU68 CYS69 GLN70 LYS71 LEU72 ARG73 ASP74 LYS75 VAL76 SER77 ASN78 THR79 LYS80 VAL81 ASP82 THR83 HIS84 LYS85 THR86 ASN87 GLY88 TYR89 PRO90 HIS91 LEU92 GLN93 VAL94 THR95 MET96 ILE97 TYR98 PRO99 GLN100 SER101 GLN102 GLY103 GLN104 THR105 PRO106 SER107 ALA108 THR109 TRP110 GLU111 PHE112 ASN113 ILE114 SER115 ASP116 SER117 TYR118 PHE119 PHE120 THR121 PHE122 TYR123 THR124 GLU125 ASN126 MET127 SER128 TRP129 ARG130 SER131 ALA132 ASN133 ASP134 GLU135 SER136 GLY137 VAL138 ILE139 MET140 ASN141 LYS142 TRP143 ASN144 ASP145 ASP146 GLY147 ASP148 LEU149 VAL150 GLN151 ARG152 LEU153 LYS154 TYR155 PHE156 ILE157 PRO158 GLU159 CYS160 ARG161 GLN162 LYS163 ILE164 ASP165 GLU166 PHE167 LEU168 LYS169 GLN170 SER171 LYS172 GLU173
Unit 2 SER1 TYR2 MET3 ASP4 VAL5 ARG6 ILE7 PHE8 GLU9 ASP10 GLU11 ARG12 VAL13 ASP14 ILE15 CYS16 GLN17 ASP18 LEU19 THR20 ALA21 THR22 PHE23 ILE24 SER25 TYR26 ARG27 GLU28 GLY29 PRO30 GLU31 MET32 PHE33 ARG34 HIS35 SER36 ILE37 ASN38 LEU39 GLU40 GLN41 SER42 SER43 ASP44 ILE45 PHE46 ARG47 ILE48 GLU49 ALA50 SER51 GLY52 GLU53 VAL54 LYS55 HIS56 PHE57 PRO58 TRP59 MET60 ASN61 VAL62 SER63 GLU64 LEU65 ALA66 GLN67 GLU68 SER69 ALA70 PHE71 PHE72 VAL73 GLU74 GLN75 GLU76 ARG77 PHE78 VAL79 TYR80 GLU81 TYR82 ILE83 MET84 ASN85 VAL86 PHE87 LYS88 ALA89 GLY90 ARG91 PRO92 VAL93 VAL94 PHE95 GLU96 TYR97 ARG98 CYS99 LYS100 PHE101 VAL102 PRO103 PHE104 GLU105 CYS106 THR107 VAL108 LEU109 GLN110 MET111 MET112 ASP113 GLY114 ASN115 THR116 LEU117 THR118 ARG119 TYR120 THR121 VAL122 ASP123 LYS124 GLY125 VAL126 GLU127 THR128 LEU129 GLY130 SER131 PRO132 PRO133 TYR134 SER135 PRO136 ASP137 VAL138 SER139 GLU140 ASP141 ASP142 ILE143 ALA144 ARG145 TYR146 GLY147 GLN148 GLY149 SER150 GLY151 ILE152 SER153 ILE154 LEU155 ARG156 ASP157 ASN158 ALA159 ALA160 LEU161 LEU162 GLN163 LYS164 ARG165 TRP166 THR167 SER168 PHE169 CYS170 ARG171 LYS172 ILE173 VAL174 ALA175 MET176 ASP177 ASN178 PRO179 ARG180 HIS181 ASN182 GLU183 TYR184 SER185 LEU186 TYR187 SER188 ASN189 ARG190 GLY191 ASN192 GLY193 TYR194 VAL195 SER196 CYS197 THR198 MET199 ARG200 THR201 GLN202 VAL203 PRO204 LEU205 ALA206 TYR207 ASN208 ILE209 SER210 LEU211 ALA212 ASN213 GLY214 VAL215 ASP216 ILE217 TYR218 LYS219 TYR220 MET221 ARG222 MET223 TYR224 SER225 GLY226 GLY227 ARG228 LEU229 LYS230 VAL231 GLU232 ALA233 TRP234 LEU235 ASP236 LEU237 ARG238 ASP239 LEU240 ASN241 GLY242 SER243 THR244 ASP245 PHE246 ALA247 PHE248 VAL249 ILE250 SER251 SER252 PRO253 THR254 GLY255 TRP256 TYR257 ALA258 THR259 VAL260 LYS261 TYR262 SER263 GLU264
Unit 3 ALA2 HIS3 SER4 LEU5 ARG6 CYS7 ASN8 LEU9 THR10 ILE11 LYS12 ALA13 PRO14 THR15 PRO16 ALA17 ASP18 PRO19 LEU20 TRP21 TYR22 GLU23 ALA24 LYS25 CYS26 LEU27 VAL28 ASP29 GLU30 ILE31 LEU32 ILE33 LEU34 HIS35 LEU36 SER37 ASN38 ILE39 ASN40 LYS41 THR42 ALA52 ASN53 ALA54 THR55 GLU56 VAL57 GLY58 GLU59 CYS60 LEU61 THR62 GLN63 PRO64 VAL65 ASN66 ASP67 LEU68 CYS69 GLN70 LYS71 LEU72 ARG73 ASP74 LYS75 VAL76 SER77 ASN78 THR79 LYS80 VAL81 ASP82 THR83 HIS84 LYS85 THR86 ASN87 GLY88 TYR89 PRO90 HIS91 LEU92 GLN93 VAL94 THR95 MET96 ILE97 TYR98 PRO99 GLN100 SER101 GLN102 GLY103 GLN104 THR105 PRO106 SER107 ALA108 THR109 TRP110 GLU111 PHE112 ASN113 ILE114 SER115 ASP116 SER117 TYR118 PHE119 PHE120 THR121 PHE122 TYR123 THR124 GLU125 ASN126 MET127 SER128 TRP129 ARG130 SER131 ALA132 ASN133 ASP134 GLU135 SER136 GLY137 VAL138 ILE139 MET140 ASN141 LYS142 TRP143 ASN144 ASP145 ASP146 GLY147 ASP148 LEU149 VAL150 GLN151 ARG152 LEU153 LYS154 TYR155 PHE156 ILE157 PRO158 GLU159 CYS160 ARG161 GLN162 LYS163 ILE164 ASP165 GLU166 PHE167 LEU168 LYS169 GLN170 SER171 LYS172 GLU173
Unit 4 SER1 TYR2 MET3 ASP4 VAL5 ARG6 ILE7 PHE8 GLU9 ASP10 GLU11 ARG12 VAL13 ASP14 ILE15 CYS16 GLN17 ASP18 LEU19 THR20 ALA21 THR22 PHE23 ILE24 SER25 TYR26 ARG27 GLU28 GLY29 PRO30 GLU31 MET32 PHE33 ARG34 HIS35 SER36 ILE37 ASN38 LEU39 GLU40 GLN41 SER42 SER43 ASP44 ILE45 PHE46 ARG47 ILE48 GLU49 ALA50 SER51 GLY52 GLU53 VAL54 LYS55 HIS56 PHE57 PRO58 TRP59 MET60 ASN61 VAL62 SER63 GLU64 LEU65 ALA66 GLN67 GLU68 SER69 ALA70 PHE71 PHE72 VAL73 GLU74 GLN75 GLU76 ARG77 PHE78 VAL79 TYR80 GLU81 TYR82 ILE83 MET84 ASN85 VAL86 PHE87 LYS88 ALA89 GLY90 ARG91 PRO92 VAL93 VAL94 PHE95 GLU96 TYR97 ARG98 CYS99 LYS100 PHE101 VAL102 PRO103 PHE104 GLU105 CYS106 THR107 VAL108 LEU109 GLN110 MET111 MET112 ASP113 GLY114 ASN115 THR116 LEU117 THR118 ARG119 TYR120 THR121 VAL122 ASP123 LYS124 GLY125 VAL126 GLU127 THR128 LEU129 GLY130 SER131 PRO132 PRO133 TYR134 SER135 PRO136 ASP137 VAL138 SER139 GLU140 ASP141 ASP142 ILE143 ALA144 ARG145 TYR146 GLY147 GLN148 GLY149 SER150 GLY151 ILE152 SER153 ILE154 LEU155 ARG156 ASP157 ASN158 ALA159 ALA160 LEU161 LEU162 GLN163 LYS164 ARG165 TRP166 THR167 SER168 PHE169 CYS170 ARG171 LYS172 ILE173 VAL174 ALA175 MET176 ASP177 ASN178 PRO179 ARG180 HIS181 ASN182 GLU183 TYR184 SER185 LEU186 TYR187 SER188 ASN189 ARG190 GLY191 ASN192 GLY193 TYR194 VAL195 SER196 CYS197 THR198 MET199 ARG200 THR201 GLN202 VAL203 PRO204 LEU205 ALA206 TYR207 ASN208 ILE209 SER210 LEU211 ALA212 ASN213 GLY214 VAL215 ASP216 ILE217 TYR218 LYS219 TYR220 MET221 ARG222 MET223 TYR224 SER225 GLY226 GLY227 ARG228 LEU229 LYS230 VAL231 GLU232 ALA233 TRP234 LEU235 ASP236 LEU237 ARG238 ASP239 LEU240 ASN241 GLY242 SER243 THR244 ASP245 PHE246 ALA247 PHE248 VAL249 ILE250 SER251 SER252 PRO253 THR254 GLY255 TRP256 TYR257 ALA258 THR259 VAL260 LYS261 TYR262 SER263 GLU264

Ligands
Unit 5 NAG401 NAG402
Unit 6 NAG401 NAG402

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany