4G0R - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURAL CHARACTERIZATION OF H-1 PARVOVIRUS: COMPARISON OF INFECTIOUS VIRIONS TO REPLICATION DEFECTIVE PARTICLES
• Keywords: BETA-BARREL, SSDNA BINDING, SSDNA, ICOSAHEDRAL VIRUS, VIRUS, CAPSID PROTEIN, CELL, VIRUS-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4G0R	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CAPSID PROTEIN VP1	A	554	4375	0
2	Other macromolecule	DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3')	C	10	194	0
3	Ligand	CAPSID PROTEIN VP1	A	8	0	38
4	Ligand	DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3')	C	2	0	2
5	Water			131	0	131
total				705	4569	171

Proteins

Unit 1

GLY 38 ILE 39 GLY 40 VAL 41 SER 42 THR 43 GLY 44 THR 45 TYR 46 ASP 47 ASN 48 GLN 49 THR 50 THR 51 TYR 52 LYS 53 PHE 54 LEU 55 GLY 56 ASP 57 GLY 58 TRP 59 VAL 60 GLU 61 ILE 62 THR 63 ALA 64 HIS 65 ALA 66 SER 67 ARG 68 LEU 69 LEU 70 HIS 71 LEU 72 GLY 73 MET 74 PRO 75 PRO 76 SER 77 GLU 78 ASN 79 TYR 80 CYS 81 ARG 82 VAL 83 THR 84 VAL 85 HIS 86 ASN 87 ASN 88 GLN 89 THR 90 THR 91 GLY 92 HIS 93 GLY 94 THR 95 LYS 96 VAL 97 LYS 98 GLY 99 ASN 100 MET 101 ALA 102 TYR 103 ASP 104 ASP 105 THR 106 HIS 107 GLN 108 GLN 109 ILE 110 TRP 111 THR 112 PRO 113 TRP 114 SER 115 LEU 116 VAL 117 ASP 118 ALA 119 ASN 120 ALA 121 TRP 122 GLY 123 VAL 124 TRP 125 PHE 126 GLN 127 PRO 128 SER 129 ASP 130 TRP 131 GLN 132 PHE 133 ILE 134 GLN 135 ASN 136 SER 137 MET 138 GLU 139 SER 140 LEU 141 ASN 142 LEU 143 ASP 144 SER 145 LEU 146 SER 147 GLN 148 GLU 149 LEU 150 PHE 151 ASN 152 VAL 153 VAL 154 VAL 155 LYS 156 THR 157 VAL 158 THR 159 GLU 160 GLN 161 GLN 162 GLY 163 ALA 164 GLY 165 ALA 168 ILE 169 LYS 170 VAL 171 TYR 172 ASN 173 ASN 174 ASP 175 LEU 176 THR 177 ALA 178 CYS 179 MET 180 MET 181 VAL 182 ALA 183 LEU 184 ASP 185 SER 186 ASN 187 ASN 188 ILE 189 LEU 190 PRO 191 TYR 192 THR 193 PRO 194 ALA 195 ALA 196 GLN 197 THR 198 SER 199 GLU 200 THR 201 LEU 202 GLY 203 PHE 204 TYR 205 PRO 206 TRP 207 LYS 208 PRO 209 THR 210 ALA 211 PRO 212 ALA 213 PRO 214 TYR 215 ARG 216 TYR 217 TYR 218 PHE 219 PHE 220 MET 221 PRO 222 ARG 223 GLN 224 LEU 225 SER 226 VAL 227 THR 228 SER 229 SER 230 ASN 231 SER 232 ALA 233 GLU 234 GLY 235 THR 236 GLN 237 ILE 238 THR 239 ASP 240 THR 241 ILE 242 GLY 243 GLU 244 PRO 245 GLN 246 ALA 247 LEU 248 ASN 249 SER 250 GLN 251 PHE 252 PHE 253 THR 254 ILE 255 GLU 256 ASN 257 THR 258 LEU 259 PRO 260 ILE 261 THR 262 LEU 263 LEU 264 ARG 265 THR 266 GLY 267 ASP 268 GLU 269 PHE 270 THR 271 THR 272 GLY 273 THR 274 TYR 275 ILE 276 PHE 277 ASN 278 THR 279 ASP 280 PRO 281 LEU 282 LYS 283 LEU 284 THR 285 HIS 286 THR 287 TRP 288 GLN 289 THR 290 ASN 291 ARG 292 HIS 293 LEU 294 GLY 295 MET 296 PRO 297 PRO 298 ARG 299 ILE 300 THR 301 ASP 302 LEU 303 PRO 304 THR 305 SER 306 ASP 307 THR 308 ALA 309 THR 310 ALA 311 SER 312 LEU 313 THR 314 ALA 315 ASN 316 GLY 317 ASP 318 ARG 319 PHE 320 GLY 321 SER 322 THR 323 GLN 324 THR 325 GLN 326 ASN 327 VAL 328 ASN 329 TYR 330 VAL 331 THR 332 GLU 333 ALA 334 LEU 335 ARG 336 THR 337 ARG 338 PRO 339 ALA 340 GLN 341 ILE 342 GLY 343 PHE 344 MET 345 GLN 346 PRO 347 HIS 348 ASP 349 ASN 350 PHE 351 GLU 352 ALA 353 ASN 354 ARG 355 GLY 356 GLY 357 PRO 358 PHE 359 LYS 360 VAL 361 PRO 362 VAL 363 VAL 364 PRO 365 LEU 366 ASP 367 ILE 368 THR 369 ALA 370 GLY 371 GLU 372 ASP 373 HIS 374 ASP 375 ALA 376 ASN 377 GLY 378 ALA 379 ILE 380 ARG 381 PHE 382 ASN 383 TYR 384 GLY 385 LYS 386 GLN 387 HIS 388 GLY 389 GLU 390 ASP 391 TRP 392 ALA 393 LYS 394 GLN 395 GLY 396 ALA 397 ALA 398 PRO 399 GLU 400 ARG 401 TYR 402 THR 403 TRP 404 ASP 405 ALA 406 ILE 407 ASP 408 SER 409 ALA 410 ALA 411 GLY 412 ARG 413 ASP 414 THR 415 ALA 416 ARG 417 CYS 418 PHE 419 VAL 420 GLN 421 SER 422 ALA 423 PRO 424 ILE 425 SER 426 ILE 427 PRO 428 PRO 429 ASN 430 GLN 431 ASN 432 GLN 433 ILE 434 LEU 435 GLN 436 ARG 437 GLU 438 ASP 439 ALA 440 ILE 441 ALA 442 GLY 443 ARG 444 THR 445 ASN 446 MET 447 HIS 448 TYR 449 THR 450 ASN 451 VAL 452 PHE 453 ASN 454 SER 455 TYR 456 GLY 457 PRO 458 LEU 459 SER 460 ALA 461 PHE 462 PRO 463 HIS 464 PRO 465 ASP 466 PRO 467 ILE 468 TYR 469 PRO 470 ASN 471 GLY 472 GLN 473 ILE 474 TRP 475 ASP 476 LYS 477 GLU 478 LEU 479 ASP 480 LEU 481 GLU 482 HIS 483 LYS 484 PRO 485 ARG 486 LEU 487 HIS 488 VAL 489 THR 490 ALA 491 PRO 492 PHE 493 VAL 494 CYS 495 LYS 496 ASN 497 ASN 498 PRO 499 PRO 500 GLY 501 GLN 502 LEU 503 PHE 504 VAL 505 ARG 506 LEU 507 GLY 508 PRO 509 ASN 510 LEU 511 THR 512 ASP 513 GLN 514 PHE 515 ASP 516 PRO 517 ASN 518 SER 519 THR 520 THR 521 VAL 522 SER 523 ARG 524 ILE 525 VAL 526 THR 527 TYR 528 SER 529 THR 530 PHE 531 TYR 532 TRP 533 LYS 534 GLY 535 ILE 536 LEU 537 LYS 538 PHE 539 LYS 540 ALA 541 LYS 542 LEU 543 ARG 544 PRO 545 ASN 546 LEU 547 THR 548 TRP 549 ASN 550 PRO 551 VAL 552 TYR 553 GLN 554 ALA 555 THR 556 THR 557 ASP 558 SER 559 VAL 560 ALA 561 ASN 562 SER 563 TYR 564 MET 565 ASN 566 VAL 567 LYS 568 LYS 569 TRP 570 LEU 571 PRO 572 SER 573 ALA 574 THR 575 GLY 576 ASN 577 MET 578 HIS 579 SER 580 ASP 581 PRO 582 LEU 583 ILE 584 CYS 585 ARG 586 PRO 587 VAL 588 PRO 589 HIS 590 MET 591 THR 592 TYR 593

Other macromolecules

Unit 2

DC 1 DT 2 DG 3 DA 4 DC 5 DT 6 DT 7 DC 8 DA 9 DA 10

Ligands

Unit 3	EDO 601 EDO 602 EDO 603 DC 604 NA 605 EDO 606 NA 607 CL 608
Unit 4	MG 101 MG 102