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Sequence, Chains, Asymmetric and Biological Units

Title EXONUCLEASE X IN COMPLEX WITH 3' OVERHANGING DUPLEX DNA
Keywords EXO, DNAQ FAMILY, DEDDH, EXONUCLEASE, NUCLEASE, MISMATCH REP REPAIR, HOMOLOGOUS RECOMBINATION, STABILIZATION OF TANDEM R HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4FZX     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   DNA (5'- D(P*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3')  B 17 352 0
2  Other macromolecule   DNA (5'- D(P*CP*GP*GP*AP*TP*CP*CP*AP*CP*AP*AP*TP*GP*AP*CP*CP*T)-3')  A 17 345 0
3  Protein   EXODEOXYRIBONUCLEASE 10  C 166 1246 72
4  Protein   EXODEOXYRIBONUCLEASE 10  D 166 1246 72
5  Ligand   DNA (5'- D(P*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3')  B 1 0 1
6  Ligand   DNA (5'- D(P*CP*GP*GP*AP*TP*CP*CP*AP*CP*AP*AP*TP*GP*AP*CP*CP*T)-3')  A 1 0 1
7  Ligand   EXODEOXYRIBONUCLEASE 10  C 1 0 1
8  Ligand   EXODEOXYRIBONUCLEASE 10  D 1 0 1
9 Water     149 0 149
total       519 3189 297

Proteins
Unit 3 MSE1 LEU2 ARG3 ILE4 ILE5 ASP6 THR7 GLU8 THR9 CYS10 GLY11 LEU12 GLN13 GLY14 GLY15 ILE16 VAL17 GLU18 ILE19 ALA20 SER21 VAL22 ASP23 VAL24 ILE25 ASP26 GLY27 LYS28 ILE29 VAL30 ASN31 PRO32 MSE33 SER34 HIS35 LEU36 VAL37 ARG38 PRO39 ASP40 ARG41 PRO42 ILE43 SER44 PRO45 GLN46 ALA47 MSE48 ALA49 ILE50 HIS51 ARG52 ILE53 THR54 GLU55 ALA56 MSE57 VAL58 ALA59 ASP60 LYS61 PRO62 TRP63 ILE64 GLU65 ASP66 VAL67 ILE68 PRO69 HIS70 TYR71 TYR72 GLY73 SER74 GLU75 TRP76 TYR77 VAL78 ALA79 HIS80 ASN81 ALA82 SER83 PHE84 ASP85 ARG86 ARG87 VAL88 LEU89 PRO90 GLU91 MSE92 PRO93 GLY94 GLU95 TRP96 ILE97 CYS98 THR99 MSE100 LYS101 LEU102 ALA103 ARG104 ARG105 LEU106 TRP107 PRO108 GLY109 ILE110 LYS111 TYR112 SER113 ASN114 MSE115 ALA116 LEU117 TYR118 LYS119 THR120 ARG121 LYS122 LEU123 ASN124 VAL125 GLN126 THR127 PRO128 PRO129 GLY130 LEU131 HIS132 HIS133 HIS134 ARG135 ALA136 LEU137 TYR138 ASP139 CYS140 TYR141 ILE142 THR143 ALA144 ALA145 LEU146 LEU147 ILE148 ASP149 ILE150 MSE151 ASN152 THR153 SER154 GLY155 TRP156 THR157 ALA158 GLU159 GLN160 MSE161 ALA162 ASP163 ILE164 THR165 GLY166
Unit 4 MSE1 LEU2 ARG3 ILE4 ILE5 ASP6 THR7 GLU8 THR9 CYS10 GLY11 LEU12 GLN13 GLY14 GLY15 ILE16 VAL17 GLU18 ILE19 ALA20 SER21 VAL22 ASP23 VAL24 ILE25 ASP26 GLY27 LYS28 ILE29 VAL30 ASN31 PRO32 MSE33 SER34 HIS35 LEU36 VAL37 ARG38 PRO39 ASP40 ARG41 PRO42 ILE43 SER44 PRO45 GLN46 ALA47 MSE48 ALA49 ILE50 HIS51 ARG52 ILE53 THR54 GLU55 ALA56 MSE57 VAL58 ALA59 ASP60 LYS61 PRO62 TRP63 ILE64 GLU65 ASP66 VAL67 ILE68 PRO69 HIS70 TYR71 TYR72 GLY73 SER74 GLU75 TRP76 TYR77 VAL78 ALA79 HIS80 ASN81 ALA82 SER83 PHE84 ASP85 ARG86 ARG87 VAL88 LEU89 PRO90 GLU91 MSE92 PRO93 GLY94 GLU95 TRP96 ILE97 CYS98 THR99 MSE100 LYS101 LEU102 ALA103 ARG104 ARG105 LEU106 TRP107 PRO108 GLY109 ILE110 LYS111 TYR112 SER113 ASN114 MSE115 ALA116 LEU117 TYR118 LYS119 THR120 ARG121 LYS122 LEU123 ASN124 VAL125 GLN126 THR127 PRO128 PRO129 GLY130 LEU131 HIS132 HIS133 HIS134 ARG135 ALA136 LEU137 TYR138 ASP139 CYS140 TYR141 ILE142 THR143 ALA144 ALA145 LEU146 LEU147 ILE148 ASP149 ILE150 MSE151 ASN152 THR153 SER154 GLY155 TRP156 THR157 ALA158 GLU159 GLN160 MSE161 ALA162 ASP163 ILE164 THR165 GLY166

Other macromolecules
Unit 1 DG1 DT2 DC3 DA4 DT5 DT6 DG7 DT8 DG9 DG10 DA11 DT12 DC13 DC14 DG15 DA16 DG17
Unit 2 DC1 DG2 DG3 DA4 DT5 DC6 DC7 DA8 DC9 DA10 DA11 DT12 DG13 DA14 DC15 DC16 DT17

Ligands
Unit 5 NA101
Unit 6 NA101
Unit 7 NA201
Unit 8 NA201

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany