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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOUSE NECTIN-2 EXTRACELLULAR FRAGMENT D CRYSTAL FORM
Keywords IMMUNOGLOBULIN-LIKE DOMAIN, IG DOMAIN, VIRAL ENTRY RECEPTOR, ADHESION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4FN0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLIOVIRUS RECEPTOR-RELATED PROTEIN 2  A 220 1706 0
2  Protein   POLIOVIRUS RECEPTOR-RELATED PROTEIN 2  B 220 1706 0
3  Protein   POLIOVIRUS RECEPTOR-RELATED PROTEIN 2  C 219 1696 0
4  Ligand    D 4 0 49
5  Ligand    E 4 0 49
6  Ligand    F 4 0 49
7  Ligand    G 4 0 49
8  Ligand    H 4 0 49
9  Ligand   POLIOVIRUS RECEPTOR-RELATED PROTEIN 2  C 1 0 14
10 Water     16 0 16
total       696 5108 275

Proteins
Unit 1 GLN32 ASP33 VAL34 ARG35 VAL36 ARG37 VAL38 LEU39 PRO40 GLU41 VAL42 ARG43 GLY44 ARG45 LEU46 GLY47 GLY48 THR49 VAL50 GLU51 LEU52 PRO53 CYS54 HIS55 LEU56 LEU57 PRO58 PRO59 THR60 THR61 GLU62 ARG63 VAL64 SER65 GLN66 VAL67 THR68 TRP69 GLN70 ARG71 LEU72 ASP73 GLY74 THR75 VAL76 VAL77 ALA78 ALA79 PHE80 HIS81 PRO82 SER83 PHE84 GLY85 VAL86 ASP87 PHE88 PRO89 ASN90 SER91 GLN92 PHE93 SER94 LYS95 ASP96 ARG97 LEU98 SER99 PHE100 VAL101 ARG102 ALA103 ARG104 PRO105 GLU106 THR107 ASN108 ALA109 ASP110 LEU111 ARG112 ASP113 ALA114 THR115 LEU116 ALA117 PHE118 ARG119 GLY120 LEU121 ARG122 VAL123 GLU124 ASP125 GLU126 GLY127 ASN128 TYR129 THR130 CYS131 GLU132 PHE133 ALA134 THR135 PHE136 PRO137 ASN138 GLY139 THR140 ARG141 ARG142 GLY143 VAL144 THR145 TRP146 LEU147 ARG148 VAL149 ILE150 ALA151 GLN152 PRO153 GLU154 ASN155 HIS156 ALA157 GLU158 ALA159 GLN160 GLU161 VAL162 THR163 ILE164 GLY165 PRO166 GLN167 SER168 VAL169 ALA170 VAL171 ALA172 ARG173 CYS174 VAL175 SER176 THR177 GLY178 GLY179 ARG180 PRO181 PRO182 ALA183 ARG184 ILE185 THR186 TRP187 ILE188 SER189 SER190 LEU191 GLY192 GLY193 GLU194 ALA195 LYS196 ASP197 THR198 GLN199 GLU200 PRO201 GLY202 ILE203 GLN204 ALA205 GLY206 THR207 VAL208 THR209 ILE210 ILE211 SER212 ARG213 TYR214 SER215 LEU216 VAL217 PRO218 VAL219 GLY220 ARG221 ALA222 ASP223 GLY224 VAL225 LYS226 VAL227 THR228 CYS229 ARG230 VAL231 GLU232 HIS233 GLU234 SER235 PHE236 GLU237 GLU238 PRO239 ILE240 LEU241 LEU242 PRO243 VAL244 THR245 LEU246 SER247 VAL248 ARG249 TYR250 HIS251
Unit 2 GLN32 ASP33 VAL34 ARG35 VAL36 ARG37 VAL38 LEU39 PRO40 GLU41 VAL42 ARG43 GLY44 ARG45 LEU46 GLY47 GLY48 THR49 VAL50 GLU51 LEU52 PRO53 CYS54 HIS55 LEU56 LEU57 PRO58 PRO59 THR60 THR61 GLU62 ARG63 VAL64 SER65 GLN66 VAL67 THR68 TRP69 GLN70 ARG71 LEU72 ASP73 GLY74 THR75 VAL76 VAL77 ALA78 ALA79 PHE80 HIS81 PRO82 SER83 PHE84 GLY85 VAL86 ASP87 PHE88 PRO89 ASN90 SER91 GLN92 PHE93 SER94 LYS95 ASP96 ARG97 LEU98 SER99 PHE100 VAL101 ARG102 ALA103 ARG104 PRO105 GLU106 THR107 ASN108 ALA109 ASP110 LEU111 ARG112 ASP113 ALA114 THR115 LEU116 ALA117 PHE118 ARG119 GLY120 LEU121 ARG122 VAL123 GLU124 ASP125 GLU126 GLY127 ASN128 TYR129 THR130 CYS131 GLU132 PHE133 ALA134 THR135 PHE136 PRO137 ASN138 GLY139 THR140 ARG141 ARG142 GLY143 VAL144 THR145 TRP146 LEU147 ARG148 VAL149 ILE150 ALA151 GLN152 PRO153 GLU154 ASN155 HIS156 ALA157 GLU158 ALA159 GLN160 GLU161 VAL162 THR163 ILE164 GLY165 PRO166 GLN167 SER168 VAL169 ALA170 VAL171 ALA172 ARG173 CYS174 VAL175 SER176 THR177 GLY178 GLY179 ARG180 PRO181 PRO182 ALA183 ARG184 ILE185 THR186 TRP187 ILE188 SER189 SER190 LEU191 GLY192 GLY193 GLU194 ALA195 LYS196 ASP197 THR198 GLN199 GLU200 PRO201 GLY202 ILE203 GLN204 ALA205 GLY206 THR207 VAL208 THR209 ILE210 ILE211 SER212 ARG213 TYR214 SER215 LEU216 VAL217 PRO218 VAL219 GLY220 ARG221 ALA222 ASP223 GLY224 VAL225 LYS226 VAL227 THR228 CYS229 ARG230 VAL231 GLU232 HIS233 GLU234 SER235 PHE236 GLU237 GLU238 PRO239 ILE240 LEU241 LEU242 PRO243 VAL244 THR245 LEU246 SER247 VAL248 ARG249 TYR250 HIS251
Unit 3 GLN32 ASP33 VAL34 ARG35 VAL36 ARG37 VAL38 LEU39 PRO40 GLU41 VAL42 ARG43 GLY44 ARG45 LEU46 GLY47 GLY48 THR49 VAL50 GLU51 LEU52 PRO53 CYS54 HIS55 LEU56 LEU57 PRO58 PRO59 THR60 THR61 GLU62 ARG63 VAL64 SER65 GLN66 VAL67 THR68 TRP69 GLN70 ARG71 LEU72 ASP73 GLY74 THR75 VAL76 VAL77 ALA78 ALA79 PHE80 HIS81 PRO82 SER83 PHE84 GLY85 VAL86 ASP87 PHE88 PRO89 ASN90 SER91 GLN92 PHE93 SER94 LYS95 ASP96 ARG97 LEU98 SER99 PHE100 VAL101 ARG102 ALA103 ARG104 PRO105 GLU106 THR107 ASN108 ALA109 ASP110 LEU111 ARG112 ASP113 ALA114 THR115 LEU116 ALA117 PHE118 ARG119 GLY120 LEU121 ARG122 VAL123 GLU124 ASP125 GLU126 GLY127 ASN128 TYR129 THR130 CYS131 GLU132 PHE133 ALA134 THR135 PHE136 PRO137 ASN138 GLY139 THR140 ARG141 ARG142 GLY143 VAL144 THR145 TRP146 LEU147 ARG148 VAL149 ILE150 ALA151 GLN152 PRO153 GLU154 ASN155 HIS156 ALA157 GLU158 ALA159 GLN160 GLU161 VAL162 THR163 ILE164 GLY165 PRO166 GLN167 SER168 VAL169 ALA170 VAL171 ALA172 ARG173 CYS174 VAL175 SER176 THR177 GLY178 GLY179 ARG180 PRO181 PRO182 ALA183 ARG184 ILE185 THR186 TRP187 ILE188 SER189 SER190 LEU191 GLY192 GLY193 GLU194 ALA195 LYS196 ASP197 THR198 GLN199 GLU200 PRO201 GLY202 ILE203 GLN204 ALA205 GLY206 THR207 VAL208 THR209 ILE210 ILE211 SER212 ARG213 TYR214 SER215 LEU216 VAL217 PRO218 VAL219 GLY220 ARG221 ALA222 ASP223 GLY224 VAL225 LYS226 VAL227 THR228 CYS229 ARG230 VAL231 GLU232 HIS233 GLU234 SER235 PHE236 GLU237 GLU238 PRO239 ILE240 LEU241 LEU242 PRO243 VAL244 THR245 LEU246 SER247 VAL248 ARG249 TYR250

Ligands
Unit 4 NAG1 NAG2 BMA3 FUC4
Unit 5 NAG1 NAG2 BMA3 FUC4
Unit 6 NAG1 NAG2 BMA3 FUC4
Unit 7 NAG1 NAG2 BMA3 FUC4
Unit 8 NAG1 NAG2 BMA3 FUC4
Unit 9 NAG305

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany