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Sequence, Chains, Asymmetric and Biological Units

Title HUMAN TOPOISOMERASE II ALPHA BOUND TO DNA
Keywords TOPOISOMERASE, DNA-BINDING, PROTEIN-DNA COMPLEX, ISOMERASE-D COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4FM9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA TOPOISOMERASE 2-ALPHA  A 727 5918 0
2  Other macromolecule    C 13 275 0
3  Other macromolecule   DNA (5'- D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3')  D 17 337 0
4  Ligand   DNA TOPOISOMERASE 2-ALPHA  A 2 0 7
5  Ligand    C 1 0 1
6 Water     44 0 44
total       804 6530 52

Proteins
Unit 1 ASN433 ARG434 ILE435 LYS436 GLY437 ILE438 PRO439 LYS440 LEU441 ASP442 ASP443 ALA444 ASN445 ASP446 ALA447 GLY448 GLY449 ARG450 ASN451 SER452 THR453 GLU454 CYS455 THR456 LEU457 ILE458 LEU459 THR460 GLU461 GLY462 ASP463 SER464 ALA465 LYS466 THR467 LEU468 ALA469 VAL470 SER471 GLY472 LEU473 GLY474 VAL475 VAL476 GLY477 ARG478 ASP479 LYS480 TYR481 GLY482 VAL483 PHE484 PRO485 LEU486 ARG487 GLY488 LYS489 ILE490 LEU491 ASN492 VAL493 ARG494 GLU495 ALA496 SER497 HIS498 LYS499 GLN500 ILE501 MET502 GLU503 ASN504 ALA505 GLU506 ILE507 ASN508 ASN509 ILE510 ILE511 LYS512 ILE513 VAL514 GLY515 LEU516 GLN517 TYR518 LYS519 LYS520 ASN521 TYR522 GLU523 ASP524 GLU525 ASP526 SER527 LEU528 LYS529 THR530 LEU531 ARG532 TYR533 GLY534 LYS535 ILE536 MET537 ILE538 MET539 THR540 ASP541 GLN542 ASP543 GLN544 ASP545 GLY546 SER547 HIS548 ILE549 LYS550 GLY551 LEU552 LEU553 ILE554 ASN555 PHE556 ILE557 HIS558 HIS559 ASN560 TRP561 PRO562 SER563 LEU564 LEU565 ARG566 HIS567 ARG568 PHE569 LEU570 GLU571 GLU572 PHE573 ILE574 THR575 PRO576 ILE577 VAL578 LYS579 VAL580 SER581 LYS582 ASN583 LYS584 GLN585 GLU586 MET587 ALA588 PHE589 TYR590 SER591 LEU592 PRO593 GLU594 PHE595 GLU596 GLU597 TRP598 LYS599 SER600 SER601 THR602 PRO603 ASN604 HIS605 LYS606 LYS607 TRP608 LYS609 VAL610 LYS611 TYR612 TYR613 LYS614 GLY615 LEU616 GLY617 THR618 SER619 THR620 SER621 LYS622 GLU623 ALA624 LYS625 GLU626 TYR627 PHE628 ALA629 ASP630 MET631 LYS632 ARG633 HIS634 ARG635 ILE636 GLN637 PHE638 LYS639 TYR640 SER641 GLY642 PRO643 GLU644 ASP645 ASP646 ALA647 ALA648 ILE649 SER650 LEU651 ALA652 PHE653 SER654 LYS655 LYS656 GLN657 ILE658 ASP659 ASP660 ARG661 LYS662 GLU663 TRP664 LEU665 THR666 ASN667 PHE668 MET669 GLU670 ASP671 ARG672 ARG673 GLN674 ARG675 LYS676 LEU677 LEU678 GLY679 LEU680 PRO681 GLU682 ASP683 TYR684 LEU685 TYR686 GLY687 GLN688 THR689 THR690 THR691 TYR692 LEU693 THR694 TYR695 ASN696 ASP697 PHE698 ILE699 ASN700 LYS701 GLU702 LEU703 ILE704 LEU705 PHE706 SER707 ASN708 SER709 ASP710 ASN711 GLU712 ARG713 SER714 ILE715 PRO716 SER717 MET718 VAL719 ASP720 GLY721 LEU722 LYS723 PRO724 GLY725 GLN726 ARG727 LYS728 VAL729 LEU730 PHE731 THR732 CYS733 PHE734 LYS735 ARG736 ASN737 ASP738 LYS739 ARG740 GLU741 VAL742 LYS743 VAL744 ALA745 GLN746 LEU747 ALA748 GLY749 SER750 VAL751 ALA752 GLU753 MET754 SER755 SER756 TYR757 HIS758 HIS759 GLY760 GLU761 MET762 SER763 LEU764 MET765 MET766 THR767 ILE768 ILE769 ASN770 LEU771 ALA772 GLN773 ASN774 PHE775 VAL776 GLY777 SER778 ASN779 ASN780 LEU781 ASN782 LEU783 LEU784 GLN785 PRO786 ILE787 GLY788 GLN789 PHE790 GLY791 THR792 ARG793 LEU794 HIS795 GLY796 GLY797 LYS798 ASP799 SER800 ALA801 SER802 PRO803 ARG804 TYR805 ILE806 PHE807 THR808 MET809 LEU810 SER811 SER812 LEU813 ALA814 ARG815 LEU816 LEU817 PHE818 PRO819 PRO820 LYS821 ASP822 ASP823 HIS824 THR825 LEU826 LYS827 PHE828 LEU829 TYR830 ASP831 ASP832 ASN833 GLN834 ARG835 VAL836 GLU837 PRO838 GLU839 TRP840 TYR841 ILE842 PRO843 ILE844 ILE845 PRO846 MET847 VAL848 LEU849 ILE850 ASN851 GLY852 ALA853 GLU854 GLY855 ILE856 GLY857 THR858 GLY859 TRP860 SER861 CYS862 LYS863 ILE864 PRO865 ASN866 PHE867 ASP868 VAL869 ARG870 GLU871 ILE872 VAL873 ASN874 ASN875 ILE876 ARG877 ARG878 LEU879 MET880 ASP881 GLY882 GLU883 GLU884 PRO885 LEU886 PRO887 MET888 LEU889 PRO890 SER891 TYR892 LYS893 ASN894 PHE895 LYS896 GLY897 THR898 ILE899 GLU900 GLU901 LEU902 ALA903 PRO904 ASN905 GLN906 TYR907 VAL908 ILE909 SER910 GLY911 GLU912 VAL913 ALA914 ILE915 LEU916 ASN917 SER918 THR919 THR920 ILE921 GLU922 ILE923 SER924 GLU925 LEU926 PRO927 VAL928 ARG929 THR930 TRP931 THR932 GLN933 THR934 TYR935 LYS936 GLU937 GLN938 VAL939 LEU940 GLU941 PRO942 MET943 LEU944 ASN945 GLY946 THR947 GLU948 LYS949 THR950 PRO951 PRO952 LEU953 ILE954 THR955 ASP956 TYR957 ARG958 GLU959 TYR960 HIS961 THR962 ASP963 THR964 THR965 VAL966 LYS967 PHE968 VAL969 VAL970 LYS971 MET972 THR973 GLU974 GLU975 LYS976 LEU977 ALA978 GLU979 ALA980 GLU981 ARG982 VAL983 GLY984 LEU985 HIS986 LYS987 VAL988 PHE989 LYS990 LEU991 GLN992 THR993 SER994 LEU995 THR996 CYS997 ASN998 SER999 MET1000 VAL1001 LEU1002 PHE1003 ASP1004 HIS1005 VAL1006 GLY1007 CYS1008 LEU1009 LYS1010 LYS1011 TYR1012 ASP1013 THR1014 VAL1015 LEU1016 ASP1017 ILE1018 LEU1019 ARG1020 ASP1021 PHE1022 PHE1023 GLU1024 LEU1025 ARG1026 LEU1027 LYS1028 TYR1029 TYR1030 GLY1031 LEU1032 ARG1033 LYS1034 GLU1035 TRP1036 LEU1037 LEU1038 GLY1039 MET1040 LEU1041 GLY1042 ALA1043 GLU1044 SER1045 ALA1046 LYS1047 LEU1048 ASN1049 ASN1050 GLN1051 ALA1052 ARG1053 PHE1054 ILE1055 LEU1056 GLU1057 LYS1058 ILE1059 ASP1060 GLY1061 LYS1062 ILE1063 ILE1064 ILE1065 GLU1066 ASN1067 LYS1068 PRO1069 LYS1070 LYS1071 GLU1072 LEU1073 ILE1074 LYS1075 VAL1076 LEU1077 ILE1078 GLN1079 ARG1080 GLY1081 TYR1082 ASP1083 SER1084 ASP1085 PRO1086 VAL1087 LYS1088 ALA1089 TRP1090 LYS1091 GLU1092 THR1124 PHE1125 ASN1126 TYR1127 LEU1128 LEU1129 ASP1130 MET1131 PRO1132 LEU1133 TRP1134 TYR1135 LEU1136 THR1137 LYS1138 GLU1139 LYS1140 LYS1141 ASP1142 GLU1143 LEU1144 CYS1145 ARG1146 LEU1147 ARG1148 ASN1149 GLU1150 LYS1151 GLU1152 GLN1153 GLU1154 LEU1155 ASP1156 THR1157 LEU1158 LYS1159 ARG1160 LYS1161 SER1162 PRO1163 SER1164 ASP1165 LEU1166 TRP1167 LYS1168 GLU1169 ASP1170 LEU1171 ALA1172 THR1173 PHE1174 ILE1175 GLU1176 GLU1177 LEU1178 GLU1179 ALA1180 VAL1181 GLU1182 ALA1183 LYS1184 GLU1185 LYS1186 GLN1187 ASP1188 GLU1189 GLN1190

Other macromolecules
Unit 2 DG1 DA2 DG3 DG4 DA5 DT6 DG7 DA8 DC9 DG10 DA11 DT12 DG13
Unit 3 DC1 DG2 DC3 DG4 DC5 DA6 DT7 DC8 DG9 DT10 DC11 DA12 DT13 DC14 DC15 DT16 DC17

Ligands
Unit 4 MG1201 GOL1202
Unit 5 MG101

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany