4FJV - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN OTUBAIN2 AND UBIQUITIN COMPLEX
• Keywords: UBIQUITIN, OTUBAIN, NEDD8,CLEAVAGE SPECIFICITY, DEUBIQUITYLA CYSTEINE PROTEASE, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4FJV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	UBIQUITIN THIOESTERASE OTUB2	A	231	1892	0
2	Protein	POLYUBIQUITIN-C	B	82	654	0
3	Protein	UBIQUITIN THIOESTERASE OTUB2	C	230	1886	0
4	Protein	POLYUBIQUITIN-C	D	82	654	0
5	Ligand	UBIQUITIN THIOESTERASE OTUB2	A	3	0	18
6	Ligand	POLYUBIQUITIN-C	B	1	0	3
7	Ligand	UBIQUITIN THIOESTERASE OTUB2	C	3	0	18
8	Ligand	POLYUBIQUITIN-C	D	1	0	3
9	Water			560	0	560
total				1193	5086	602

Proteins

Unit 1	SER 2 GLU 3 THR 4 SER 5 PHE 6 ASN 7 LEU 8 ILE 9 SER 10 GLU 11 LYS 12 CYS 13 ASP 14 ILE 15 LEU 16 SER 17 ILE 18 LEU 19 ARG 20 ASP 21 HIS 22 PRO 23 GLU 24 ASN 25 ARG 26 ILE 27 TYR 28 ARG 29 ARG 30 LYS 31 ILE 32 GLU 33 GLU 34 LEU 35 SER 36 LYS 37 ARG 38 PHE 39 THR 40 ALA 41 ILE 42 ARG 43 LYS 44 THR 45 LYS 46 GLY 47 ASP 48 GLY 49 ASN 50 CYS 51 PHE 52 TYR 53 ARG 54 ALA 55 LEU 56 GLY 57 TYR 58 SER 59 TYR 60 LEU 61 GLU 62 SER 63 LEU 64 LEU 65 GLY 66 LYS 67 SER 68 ARG 69 GLU 70 ILE 71 PHE 72 LYS 73 PHE 74 LYS 75 GLU 76 ARG 77 VAL 78 LEU 79 GLN 80 THR 81 PRO 82 ASN 83 ASP 84 LEU 85 LEU 86 ALA 87 ALA 88 GLY 89 PHE 90 GLU 91 GLU 92 HIS 93 LYS 94 PHE 95 ARG 96 ASN 97 PHE 98 PHE 99 ASN 100 ALA 101 PHE 102 TYR 103 SER 104 VAL 105 VAL 106 GLU 107 LEU 108 VAL 109 GLU 110 LYS 111 ASP 112 GLY 113 SER 114 VAL 115 SER 116 SER 117 LEU 118 LEU 119 LYS 120 VAL 121 PHE 122 ASN 123 ASP 124 GLN 125 SER 126 ALA 127 SER 128 ASP 129 HIS 130 ILE 131 VAL 132 GLN 133 PHE 134 LEU 135 ARG 136 LEU 137 LEU 138 THR 139 SER 140 ALA 141 PHE 142 ILE 143 ARG 144 ASN 145 ARG 146 ALA 147 ASP 148 PHE 149 PHE 150 ARG 151 HIS 152 PHE 153 ILE 154 ASP 155 GLU 156 GLU 157 MET 158 ASP 159 ILE 160 LYS 161 ASP 162 PHE 163 CYS 164 THR 165 HIS 166 GLU 167 VAL 168 GLU 169 PRO 170 MET 171 ALA 172 THR 173 GLU 174 CYS 175 ASP 176 HIS 177 ILE 178 GLN 179 ILE 180 THR 181 ALA 182 LEU 183 SER 184 GLN 185 ALA 186 LEU 187 SER 188 ILE 189 ALA 190 LEU 191 GLN 192 VAL 193 GLU 194 TYR 195 VAL 196 ASP 197 GLU 198 MET 199 ASP 200 THR 201 ALA 202 LEU 203 ASN 204 HIS 205 HIS 206 VAL 207 PHE 208 PRO 209 GLU 210 ALA 211 ALA 212 THR 213 PRO 214 SER 215 VAL 216 TYR 217 LEU 218 LEU 219 TYR 220 LYS 221 THR 222 SER 223 HIS 224 TYR 225 ASN 226 ILE 227 LEU 228 TYR 229 ALA 230 ALA 231 ASP 232
Unit 2	ASP -6 VAL -5 PRO -4 ASP -3 TYR -2 ALA -1 HIS 0 MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73 ARG 74 GLY 75
Unit 3	GLU 3 THR 4 SER 5 PHE 6 ASN 7 LEU 8 ILE 9 SER 10 GLU 11 LYS 12 CYS 13 ASP 14 ILE 15 LEU 16 SER 17 ILE 18 LEU 19 ARG 20 ASP 21 HIS 22 PRO 23 GLU 24 ASN 25 ARG 26 ILE 27 TYR 28 ARG 29 ARG 30 LYS 31 ILE 32 GLU 33 GLU 34 LEU 35 SER 36 LYS 37 ARG 38 PHE 39 THR 40 ALA 41 ILE 42 ARG 43 LYS 44 THR 45 LYS 46 GLY 47 ASP 48 GLY 49 ASN 50 CYS 51 PHE 52 TYR 53 ARG 54 ALA 55 LEU 56 GLY 57 TYR 58 SER 59 TYR 60 LEU 61 GLU 62 SER 63 LEU 64 LEU 65 GLY 66 LYS 67 SER 68 ARG 69 GLU 70 ILE 71 PHE 72 LYS 73 PHE 74 LYS 75 GLU 76 ARG 77 VAL 78 LEU 79 GLN 80 THR 81 PRO 82 ASN 83 ASP 84 LEU 85 LEU 86 ALA 87 ALA 88 GLY 89 PHE 90 GLU 91 GLU 92 HIS 93 LYS 94 PHE 95 ARG 96 ASN 97 PHE 98 PHE 99 ASN 100 ALA 101 PHE 102 TYR 103 SER 104 VAL 105 VAL 106 GLU 107 LEU 108 VAL 109 GLU 110 LYS 111 ASP 112 GLY 113 SER 114 VAL 115 SER 116 SER 117 LEU 118 LEU 119 LYS 120 VAL 121 PHE 122 ASN 123 ASP 124 GLN 125 SER 126 ALA 127 SER 128 ASP 129 HIS 130 ILE 131 VAL 132 GLN 133 PHE 134 LEU 135 ARG 136 LEU 137 LEU 138 THR 139 SER 140 ALA 141 PHE 142 ILE 143 ARG 144 ASN 145 ARG 146 ALA 147 ASP 148 PHE 149 PHE 150 ARG 151 HIS 152 PHE 153 ILE 154 ASP 155 GLU 156 GLU 157 MET 158 ASP 159 ILE 160 LYS 161 ASP 162 PHE 163 CYS 164 THR 165 HIS 166 GLU 167 VAL 168 GLU 169 PRO 170 MET 171 ALA 172 THR 173 GLU 174 CYS 175 ASP 176 HIS 177 ILE 178 GLN 179 ILE 180 THR 181 ALA 182 LEU 183 SER 184 GLN 185 ALA 186 LEU 187 SER 188 ILE 189 ALA 190 LEU 191 GLN 192 VAL 193 GLU 194 TYR 195 VAL 196 ASP 197 GLU 198 MET 199 ASP 200 THR 201 ALA 202 LEU 203 ASN 204 HIS 205 HIS 206 VAL 207 PHE 208 PRO 209 GLU 210 ALA 211 ALA 212 THR 213 PRO 214 SER 215 VAL 216 TYR 217 LEU 218 LEU 219 TYR 220 LYS 221 THR 222 SER 223 HIS 224 TYR 225 ASN 226 ILE 227 LEU 228 TYR 229 ALA 230 ALA 231 ASP 232
Unit 4	ASP -6 VAL -5 PRO -4 ASP -3 TYR -2 ALA -1 HIS 0 MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73 ARG 74 GLY 75

Ligands

Unit 5	GOL 301 GOL 302 GOL 303
Unit 6	NEH 101
Unit 7	GOL 301 GOL 302 GOL 303
Unit 8	NEH 101