4F9D - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF ESCHERICHIA COLI PGAB 42-655 IN COMPLEX WITH NI
• Keywords: FAMILY 4 CARBOHYDRATE ESTERASE, TIM BARREL, HYDROLASE, DEACE CARBOHYDRATE/SUGAR BINDING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4F9D	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	592	4728	0
2	Protein		B	592	4720	0
3	Ligand		A	4	0	18
4	Ligand		B	4	0	18
5	Water			1009	0	1009
total				2201	9448	1045

Proteins

Unit 1

PRO 43 TRP 44 PRO 45 HIS 46 ASN 47 GLY 48 PHE 49 VAL 50 ALA 51 ILE 52 SER 53 TRP 54 HIS 55 ASN 56 VAL 57 GLU 58 ASP 59 GLU 60 ALA 61 ASP 63 GLN 64 ARG 65 PHE 66 MET 67 SER 68 VAL 69 ARG 70 THR 71 SER 72 ALA 73 LEU 74 ARG 75 GLU 76 GLN 77 PHE 78 ALA 79 TRP 80 LEU 81 ARG 82 GLU 83 ASN 84 GLY 85 TYR 86 GLN 87 PRO 88 VAL 89 SER 90 ILE 91 ALA 92 GLN 93 ILE 94 ARG 95 GLU 96 ALA 97 HIS 98 ARG 99 GLY 100 GLY 101 LYS 102 PRO 103 LEU 104 PRO 105 GLU 106 LYS 107 ALA 108 VAL 109 VAL 110 LEU 111 THR 112 PHE 113 ASP 114 ASP 115 GLY 116 TYR 117 GLN 118 SER 119 PHE 120 TYR 121 THR 122 ARG 123 VAL 124 PHE 125 PRO 126 ILE 127 LEU 128 GLN 129 ALA 130 PHE 131 GLN 132 TRP 133 PRO 134 ALA 135 VAL 136 TRP 137 ALA 138 PRO 139 VAL 140 GLY 141 SER 142 TRP 143 VAL 144 ASP 145 THR 146 PRO 147 ALA 148 ASP 149 LYS 150 GLN 151 VAL 152 LYS 153 PHE 154 GLY 155 ASP 156 GLU 157 LEU 158 VAL 159 ASP 160 ARG 161 GLU 162 TYR 163 PHE 164 ALA 165 THR 166 TRP 167 GLN 168 GLN 169 VAL 170 ARG 171 GLU 172 VAL 173 ALA 174 ARG 175 SER 176 ARG 177 LEU 178 VAL 179 GLU 180 LEU 181 ALA 182 SER 183 HIS 184 THR 185 TRP 186 ASN 187 SER 188 HIS 189 TYR 190 GLY 191 ILE 192 GLN 193 ALA 194 ASN 195 ALA 196 THR 197 GLY 198 SER 199 LEU 200 LEU 201 PRO 202 VAL 203 TYR 204 VAL 205 ASN 206 ARG 207 ALA 208 TYR 209 PHE 210 THR 211 ASP 212 HIS 213 ALA 214 ARG 215 TYR 216 GLU 217 THR 218 ALA 219 ALA 220 GLU 221 TYR 222 ARG 223 GLU 224 ARG 225 ILE 226 ARG 227 LEU 228 ASP 229 ALA 230 VAL 231 LYS 232 MET 233 THR 234 GLU 235 TYR 236 LEU 237 ARG 238 THR 239 LYS 240 VAL 241 GLU 242 VAL 243 ASN 244 PRO 245 HIS 246 VAL 247 PHE 248 VAL 249 TRP 250 PRO 251 TYR 252 GLY 253 GLU 254 ALA 255 ASN 256 GLY 257 ILE 258 ALA 259 ILE 260 GLU 261 GLU 262 LEU 263 LYS 264 LYS 265 LEU 266 GLY 267 TYR 268 ASP 269 MET 270 PHE 271 PHE 272 THR 273 LEU 274 GLU 275 SER 276 GLY 277 LEU 278 ALA 279 ASN 280 ALA 281 SER 282 GLN 283 LEU 284 ASP 285 SER 286 ILE 287 PRO 288 ARG 289 VAL 290 LEU 291 ILE 292 ALA 293 ASN 294 ASN 295 PRO 296 SER 297 LEU 298 LYS 299 GLU 300 PHE 301 ALA 302 GLN 303 GLN 304 ILE 305 ILE 306 THR 307 VAL 308 GLN 309 GLU 310 LYS 311 SER 312 PRO 313 GLN 314 ARG 315 ILE 316 MET 317 HIS 318 ILE 319 ASP 320 LEU 321 ASP 322 TYR 323 VAL 324 TYR 325 ASP 326 GLU 327 ASN 328 LEU 329 GLN 330 GLN 331 MET 332 ASP 333 ARG 334 ASN 335 ILE 336 ASP 337 VAL 338 LEU 339 ILE 340 GLN 341 ARG 342 VAL 343 LYS 344 ASP 345 MET 346 GLN 347 ILE 348 SER 349 THR 350 VAL 351 TYR 352 LEU 353 GLN 354 ALA 355 PHE 356 ALA 357 ASP 358 PRO 359 ASP 360 GLY 361 ASP 362 GLY 363 LEU 364 VAL 365 LYS 366 GLU 367 VAL 368 TRP 369 PHE 370 PRO 371 ASN 372 ARG 373 LEU 374 LEU 375 PRO 376 MET 377 LYS 378 ALA 379 ASP 380 ILE 381 PHE 382 SER 383 ARG 384 VAL 385 ALA 386 TRP 387 GLN 388 LEU 389 ARG 390 THR 391 ARG 392 SER 393 GLY 394 VAL 395 ASN 396 ILE 397 TYR 398 ALA 399 TRP 400 MET 401 PRO 402 VAL 403 LEU 404 SER 405 TRP 406 ASP 407 LEU 408 ASP 409 PRO 410 THR 411 LEU 412 THR 413 ARG 414 VAL 415 LYS 416 TYR 417 LEU 418 PRO 419 THR 420 GLY 421 GLU 422 LYS 423 LYS 424 ALA 425 GLN 426 ILE 427 HIS 428 PRO 429 GLU 430 GLN 431 TYR 432 HIS 433 ARG 434 LEU 435 SER 436 PRO 437 PHE 438 ASP 439 ASP 440 ARG 441 VAL 442 ARG 443 ALA 444 GLN 445 VAL 446 GLY 447 MET 448 LEU 449 TYR 450 GLU 451 ASP 452 LEU 453 ALA 454 GLY 455 HIS 456 ALA 457 ALA 458 PHE 459 ASP 460 GLY 461 ILE 462 LEU 463 PHE 464 HIS 465 ASP 466 ASP 467 ALA 468 LEU 469 LEU 470 SER 471 ASP 472 TYR 473 GLU 474 ASP 475 ALA 476 SER 477 ALA 478 PRO 479 ALA 480 ILE 481 THR 482 ALA 483 TYR 484 GLN 485 GLN 486 ALA 487 GLY 488 PHE 489 SER 490 GLY 491 SER 492 LEU 493 SER 494 GLU 495 ILE 496 ARG 497 GLN 498 ASN 499 PRO 500 GLU 501 GLN 502 PHE 503 LYS 504 GLN 505 TRP 506 ALA 507 ARG 508 PHE 509 LYS 510 SER 511 ARG 512 ALA 513 LEU 514 THR 515 ASP 516 PHE 517 THR 518 LEU 519 GLU 520 LEU 521 SER 522 ALA 523 ARG 524 VAL 525 LYS 526 ALA 527 ILE 528 ARG 529 GLY 530 PRO 531 HIS 532 ILE 533 LYS 534 THR 535 ALA 536 ARG 537 ASN 538 ILE 539 PHE 540 ALA 541 LEU 542 PRO 543 VAL 544 ILE 545 GLN 546 PRO 547 GLU 548 SER 549 GLU 550 ALA 551 TRP 552 PHE 553 ALA 554 GLN 555 ASN 556 TYR 557 ALA 558 ASP 559 PHE 560 LEU 561 LYS 562 SER 563 TYR 564 ASP 565 TRP 566 THR 567 ALA 568 ILE 569 MET 570 ALA 571 MET 572 PRO 573 TYR 574 LEU 575 GLU 576 GLY 577 VAL 578 ALA 579 GLU 580 LYS 581 SER 582 ALA 583 ASP 584 GLN 585 TRP 586 LEU 587 ILE 588 GLN 589 LEU 590 THR 591 ASN 592 GLN 593 ILE 594 LYS 595 ASN 596 ILE 597 PRO 598 GLN 599 ALA 600 LYS 601 ASP 602 LYS 603 SER 604 ILE 605 LEU 606 GLU 607 LEU 608 GLN 609 ALA 621 ILE 622 SER 623 SER 624 GLN 625 GLN 626 LEU 627 ALA 628 HIS 629 TRP 630 MET 631 SER 632 LEU 633 LEU 634 GLN 635 LEU 636 ASN 637 GLY 638 VAL 639 LYS 640 ASN 641 TYR 642 GLY 643 TYR 644 TYR 645 PRO 646

Unit 2

PRO 43 TRP 44 PRO 45 HIS 46 ASN 47 GLY 48 PHE 49 VAL 50 ALA 51 ILE 52 SER 53 TRP 54 HIS 55 ASN 56 VAL 57 GLU 58 ASP 59 GLU 60 ALA 61 ASP 63 GLN 64 ARG 65 PHE 66 MET 67 SER 68 VAL 69 ARG 70 THR 71 SER 72 ALA 73 LEU 74 ARG 75 GLU 76 GLN 77 PHE 78 ALA 79 TRP 80 LEU 81 ARG 82 GLU 83 ASN 84 GLY 85 TYR 86 GLN 87 PRO 88 VAL 89 SER 90 ILE 91 ALA 92 GLN 93 ILE 94 ARG 95 GLU 96 ALA 97 HIS 98 ARG 99 GLY 100 GLY 101 LYS 102 PRO 103 LEU 104 PRO 105 GLU 106 LYS 107 ALA 108 VAL 109 VAL 110 LEU 111 THR 112 PHE 113 ASP 114 ASP 115 GLY 116 TYR 117 GLN 118 SER 119 PHE 120 TYR 121 THR 122 ARG 123 VAL 124 PHE 125 PRO 126 ILE 127 LEU 128 GLN 129 ALA 130 PHE 131 GLN 132 TRP 133 PRO 134 ALA 135 VAL 136 TRP 137 ALA 138 PRO 139 VAL 140 GLY 141 SER 142 TRP 143 VAL 144 ASP 145 THR 146 PRO 147 ALA 148 ASP 149 LYS 150 GLN 151 VAL 152 LYS 153 PHE 154 GLY 155 ASP 156 GLU 157 LEU 158 VAL 159 ASP 160 ARG 161 GLU 162 TYR 163 PHE 164 ALA 165 THR 166 TRP 167 GLN 168 GLN 169 VAL 170 ARG 171 GLU 172 VAL 173 ALA 174 ARG 175 SER 176 ARG 177 LEU 178 VAL 179 GLU 180 LEU 181 ALA 182 SER 183 HIS 184 THR 185 TRP 186 ASN 187 SER 188 HIS 189 TYR 190 GLY 191 ILE 192 GLN 193 ALA 194 ASN 195 ALA 196 THR 197 GLY 198 SER 199 LEU 200 LEU 201 PRO 202 VAL 203 TYR 204 VAL 205 ASN 206 ARG 207 ALA 208 TYR 209 PHE 210 THR 211 ASP 212 HIS 213 ALA 214 ARG 215 TYR 216 GLU 217 THR 218 ALA 219 ALA 220 GLU 221 TYR 222 ARG 223 GLU 224 ARG 225 ILE 226 ARG 227 LEU 228 ASP 229 ALA 230 VAL 231 LYS 232 MET 233 THR 234 GLU 235 TYR 236 LEU 237 ARG 238 THR 239 LYS 240 VAL 241 GLU 242 VAL 243 ASN 244 PRO 245 HIS 246 VAL 247 PHE 248 VAL 249 TRP 250 PRO 251 TYR 252 GLY 253 GLU 254 ALA 255 ASN 256 GLY 257 ILE 258 ALA 259 ILE 260 GLU 261 GLU 262 LEU 263 LYS 264 LYS 265 LEU 266 GLY 267 TYR 268 ASP 269 MET 270 PHE 271 PHE 272 THR 273 LEU 274 GLU 275 SER 276 GLY 277 LEU 278 ALA 279 ASN 280 ALA 281 SER 282 GLN 283 LEU 284 ASP 285 SER 286 ILE 287 PRO 288 ARG 289 VAL 290 LEU 291 ILE 292 ALA 293 ASN 294 ASN 295 PRO 296 SER 297 LEU 298 LYS 299 GLU 300 PHE 301 ALA 302 GLN 303 GLN 304 ILE 305 ILE 306 THR 307 VAL 308 GLN 309 GLU 310 LYS 311 SER 312 PRO 313 GLN 314 ARG 315 ILE 316 MET 317 HIS 318 ILE 319 ASP 320 LEU 321 ASP 322 TYR 323 VAL 324 TYR 325 ASP 326 GLU 327 ASN 328 LEU 329 GLN 330 GLN 331 MET 332 ASP 333 ARG 334 ASN 335 ILE 336 ASP 337 VAL 338 LEU 339 ILE 340 GLN 341 ARG 342 VAL 343 LYS 344 ASP 345 MET 346 GLN 347 ILE 348 SER 349 THR 350 VAL 351 TYR 352 LEU 353 GLN 354 ALA 355 PHE 356 ALA 357 ASP 358 PRO 359 ASP 360 GLY 361 ASP 362 GLY 363 LEU 364 VAL 365 LYS 366 GLU 367 VAL 368 TRP 369 PHE 370 PRO 371 ASN 372 ARG 373 LEU 374 LEU 375 PRO 376 MET 377 LYS 378 ALA 379 ASP 380 ILE 381 PHE 382 SER 383 ARG 384 VAL 385 ALA 386 TRP 387 GLN 388 LEU 389 ARG 390 THR 391 ARG 392 SER 393 GLY 394 VAL 395 ASN 396 ILE 397 TYR 398 ALA 399 TRP 400 MET 401 PRO 402 VAL 403 LEU 404 SER 405 TRP 406 ASP 407 LEU 408 ASP 409 PRO 410 THR 411 LEU 412 THR 413 ARG 414 VAL 415 LYS 416 TYR 417 LEU 418 PRO 419 THR 420 GLY 421 GLU 422 LYS 423 LYS 424 ALA 425 GLN 426 ILE 427 HIS 428 PRO 429 GLU 430 GLN 431 TYR 432 HIS 433 ARG 434 LEU 435 SER 436 PRO 437 PHE 438 ASP 439 ASP 440 ARG 441 VAL 442 ARG 443 ALA 444 GLN 445 VAL 446 GLY 447 MET 448 LEU 449 TYR 450 GLU 451 ASP 452 LEU 453 ALA 454 GLY 455 HIS 456 ALA 457 ALA 458 PHE 459 ASP 460 GLY 461 ILE 462 LEU 463 PHE 464 HIS 465 ASP 466 ASP 467 ALA 468 LEU 469 LEU 470 SER 471 ASP 472 TYR 473 GLU 474 ASP 475 ALA 476 SER 477 ALA 478 PRO 479 ALA 480 ILE 481 THR 482 ALA 483 TYR 484 GLN 485 GLN 486 ALA 487 GLY 488 PHE 489 SER 490 GLY 491 SER 492 LEU 493 SER 494 GLU 495 ILE 496 ARG 497 GLN 498 ASN 499 PRO 500 GLU 501 GLN 502 PHE 503 LYS 504 GLN 505 TRP 506 ALA 507 ARG 508 PHE 509 LYS 510 SER 511 ARG 512 ALA 513 LEU 514 THR 515 ASP 516 PHE 517 THR 518 LEU 519 GLU 520 LEU 521 SER 522 ALA 523 ARG 524 VAL 525 LYS 526 ALA 527 ILE 528 ARG 529 GLY 530 PRO 531 HIS 532 ILE 533 LYS 534 THR 535 ALA 536 ARG 537 ASN 538 ILE 539 PHE 540 ALA 541 LEU 542 PRO 543 VAL 544 ILE 545 GLN 546 PRO 547 GLU 548 SER 549 GLU 550 ALA 551 TRP 552 PHE 553 ALA 554 GLN 555 ASN 556 TYR 557 ALA 558 ASP 559 PHE 560 LEU 561 LYS 562 SER 563 TYR 564 ASP 565 TRP 566 THR 567 ALA 568 ILE 569 MET 570 ALA 571 MET 572 PRO 573 TYR 574 LEU 575 GLU 576 GLY 577 VAL 578 ALA 579 GLU 580 LYS 581 SER 582 ALA 583 ASP 584 GLN 585 TRP 586 LEU 587 ILE 588 GLN 589 LEU 590 THR 591 ASN 592 GLN 593 ILE 594 LYS 595 ASN 596 ILE 597 PRO 598 GLN 599 ALA 600 LYS 601 ASP 602 LYS 603 SER 604 ILE 605 LEU 606 GLU 607 LEU 608 GLN 609 ALA 621 ILE 622 SER 623 SER 624 GLN 625 GLN 626 LEU 627 ALA 628 HIS 629 TRP 630 MET 631 SER 632 LEU 633 LEU 634 GLN 635 LEU 636 ASN 637 GLY 638 VAL 639 LYS 640 ASN 641 TYR 642 GLY 643 TYR 644 TYR 645 PRO 646

Ligands

Unit 3	NI 701 ACY 702 CA 703 MES 704
Unit 4	NI 701 ACY 702 CA 703 MES 704