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Sequence, Chains, Asymmetric and Biological Units

Title Y-FAMILY DNA POLYMERASE CHIMERA DPO4-DPO4-DBH
Keywords Y-FAMILY POLYMERASE, TRANSFERASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4F4Z     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA POLYMERASE IV  B 341 2711 0
2  Protein   DNA POLYMERASE IV  A 342 2729 0
3  Other macromolecule    P 12 252 0
4  Other macromolecule    T 13 256 0
5  Other macromolecule    C 12 252 0
6  Other macromolecule    D 12 237 0
7  Ligand   DNA POLYMERASE IV  B 2 0 2
8  Ligand   DNA POLYMERASE IV  A 1 0 1
9 Water     91 0 91
total       826 6437 94
Proteins
Unit 1 MET1 ILE2 VAL3 LEU4 PHE5 VAL6 ASP7 PHE8 ASP9 TYR10 PHE11 TYR12 ALA13 GLN14 VAL15 GLU16 GLU17 VAL18 LEU19 ASN20 PRO21 SER22 LEU23 LYS24 GLY25 LYS26 PRO27 VAL28 VAL29 VAL30 CYS31 VAL32 PHE33 SER34 GLY35 ARG36 PHE37 GLU38 ASP39 SER40 GLY41 ALA42 VAL43 ALA44 THR45 ALA46 ASN47 TYR48 GLU49 ALA50 ARG51 LYS52 PHE53 GLY54 VAL55 LYS56 ALA57 GLY58 ILE59 PRO60 ILE61 VAL62 GLU63 ALA64 LYS65 LYS66 ILE67 LEU68 PRO69 ASN70 ALA71 VAL72 TYR73 LEU74 PRO75 MET76 ARG77 LYS78 GLU79 VAL80 TYR81 GLN82 GLN83 VAL84 SER85 SER86 ARG87 ILE88 MET89 ASN90 LEU91 LEU92 ARG93 GLU94 TYR95 SER96 GLU97 LYS98 ILE99 GLU100 ILE101 ALA102 SER103 ILE104 ASP105 GLU106 ALA107 TYR108 LEU109 ASP110 ILE111 SER112 ASP113 LYS114 VAL115 ARG116 ASP117 TYR118 ARG119 GLU120 ALA121 TYR122 ASN123 LEU124 GLY125 LEU126 GLU127 ILE128 LYS129 ASN130 LYS131 ILE132 LEU133 GLU134 LYS135 GLU136 LYS137 ILE138 THR139 VAL140 THR141 VAL142 GLY143 ILE144 SER145 LYS146 ASN147 LYS148 VAL149 PHE150 ALA151 LYS152 ILE153 ALA154 ALA155 ASP156 MET157 ALA158 LYS159 PRO160 ASN161 GLY162 ILE163 LYS164 VAL165 ILE166 ASP167 ASP168 GLU169 GLU170 VAL171 LYS172 ARG173 LEU174 ILE175 ARG176 GLU177 LEU178 ASP179 ILE180 ALA181 ASP182 VAL183 PRO184 GLY185 ILE186 GLY187 ASN188 ILE189 THR190 ALA191 GLU192 LYS193 LEU194 LYS195 LYS196 LEU197 GLY198 ILE199 ASN200 LYS201 LEU202 VAL203 ASP204 THR205 LEU206 SER207 ILE208 GLU209 PHE210 ASP211 LYS212 LEU213 LYS214 GLY215 MET216 ILE217 GLY218 GLU219 ALA220 LYS221 ALA222 LYS223 TYR224 LEU225 ILE226 SER227 LEU228 ALA229 ARG230 ASP231 GLU232 TYR233 ASN234 GLU235 PRO236 ILE237 ARG238 THR239 ARG240 VAL241 ARG242 LYS243 SER244 ILE245 GLY246 ARG247 TYR248 LEU249 THR250 LEU251 PRO252 TYR253 ASN254 THR255 ARG256 ASP257 VAL258 LYS259 VAL260 ILE261 LEU262 PRO263 TYR264 LEU265 LYS266 LYS267 ALA268 ILE269 ASN270 GLU271 ALA272 TYR273 ASN274 LYS275 VAL276 ASN277 GLY278 ILE279 PRO280 MET281 ARG282 ILE283 THR284 VAL285 ILE286 ALA287 ILE288 MET289 GLU290 ASP291 LEU292 ASP293 ILE294 LEU295 SER296 LYS297 GLY298 LYS299 LYS300 PHE301 LYS302 HIS303 GLY304 ILE305 SER306 ILE307 ASP308 ASN309 ALA310 TYR311 LYS312 VAL313 ALA314 GLU315 ASP316 LEU317 LEU318 ARG319 GLU320 LEU321 LEU322 VAL323 ARG324 ASP325 LYS326 ARG327 ARG328 ASN329 VAL330 ARG331 ARG332 ILE333 GLY334 VAL335 LYS336 LEU337 ASP338 ASN339 ILE340 ILE341
Unit 2 MET1 ILE2 VAL3 LEU4 PHE5 VAL6 ASP7 PHE8 ASP9 TYR10 PHE11 TYR12 ALA13 GLN14 VAL15 GLU16 GLU17 VAL18 LEU19 ASN20 PRO21 SER22 LEU23 LYS24 GLY25 LYS26 PRO27 VAL28 VAL29 VAL30 CYS31 VAL32 PHE33 SER34 GLY35 ARG36 PHE37 GLU38 ASP39 SER40 GLY41 ALA42 VAL43 ALA44 THR45 ALA46 ASN47 TYR48 GLU49 ALA50 ARG51 LYS52 PHE53 GLY54 VAL55 LYS56 ALA57 GLY58 ILE59 PRO60 ILE61 VAL62 GLU63 ALA64 LYS65 LYS66 ILE67 LEU68 PRO69 ASN70 ALA71 VAL72 TYR73 LEU74 PRO75 MET76 ARG77 LYS78 GLU79 VAL80 TYR81 GLN82 GLN83 VAL84 SER85 SER86 ARG87 ILE88 MET89 ASN90 LEU91 LEU92 ARG93 GLU94 TYR95 SER96 GLU97 LYS98 ILE99 GLU100 ILE101 ALA102 SER103 ILE104 ASP105 GLU106 ALA107 TYR108 LEU109 ASP110 ILE111 SER112 ASP113 LYS114 VAL115 ARG116 ASP117 TYR118 ARG119 GLU120 ALA121 TYR122 ASN123 LEU124 GLY125 LEU126 GLU127 ILE128 LYS129 ASN130 LYS131 ILE132 LEU133 GLU134 LYS135 GLU136 LYS137 ILE138 THR139 VAL140 THR141 VAL142 GLY143 ILE144 SER145 LYS146 ASN147 LYS148 VAL149 PHE150 ALA151 LYS152 ILE153 ALA154 ALA155 ASP156 MET157 ALA158 LYS159 PRO160 ASN161 GLY162 ILE163 LYS164 VAL165 ILE166 ASP167 ASP168 GLU169 GLU170 VAL171 LYS172 ARG173 LEU174 ILE175 ARG176 GLU177 LEU178 ASP179 ILE180 ALA181 ASP182 VAL183 PRO184 GLY185 ILE186 GLY187 ASN188 ILE189 THR190 ALA191 GLU192 LYS193 LEU194 LYS195 LYS196 LEU197 GLY198 ILE199 ASN200 LYS201 LEU202 VAL203 ASP204 THR205 LEU206 SER207 ILE208 GLU209 PHE210 ASP211 LYS212 LEU213 LYS214 GLY215 MET216 ILE217 GLY218 GLU219 ALA220 LYS221 ALA222 LYS223 TYR224 LEU225 ILE226 SER227 LEU228 ALA229 ARG230 ASP231 GLU232 TYR233 ASN234 GLU235 PRO236 ILE237 ARG238 THR239 ARG240 VAL241 ARG242 LYS243 SER244 ILE245 GLY246 ARG247 TYR248 LEU249 THR250 LEU251 PRO252 TYR253 ASN254 THR255 ARG256 ASP257 VAL258 LYS259 VAL260 ILE261 LEU262 PRO263 TYR264 LEU265 LYS266 LYS267 ALA268 ILE269 ASN270 GLU271 ALA272 TYR273 ASN274 LYS275 VAL276 ASN277 GLY278 ILE279 PRO280 MET281 ARG282 ILE283 THR284 VAL285 ILE286 ALA287 ILE288 MET289 GLU290 ASP291 LEU292 ASP293 ILE294 LEU295 SER296 LYS297 GLY298 LYS299 LYS300 PHE301 LYS302 HIS303 GLY304 ILE305 SER306 ILE307 ASP308 ASN309 ALA310 TYR311 LYS312 VAL313 ALA314 GLU315 ASP316 LEU317 LEU318 ARG319 GLU320 LEU321 LEU322 VAL323 ARG324 ASP325 LYS326 ARG327 ARG328 ASN329 VAL330 ARG331 ARG332 ILE333 GLY334 VAL335 LYS336 LEU337 ASP338 ASN339 ILE340 ILE341 ILE342
Other macromolecules
Unit 3 DA2 DG3 DG4 DG5 DG6 DG7 DA8 DA9 DG10 DC11 DC12 DG13
Unit 4 DC5 DC6 DG7 DG8 DC9 DT10 DT11 DC12 DC13 DC14 DC15 DC16 DT17
Unit 5 DA2 DG3 DG4 DG5 DG6 DG7 DA8 DA9 DG10 DC11 DC12 DG13
Unit 6 DC6 DG7 DG8 DC9 DT10 DT11 DC12 DC13 DC14 DC15 DC16 DT17
Ligands
Unit 7 CA401 CA402
Unit 8 CA401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany