Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE PABP-BINDING SITE OF EIF4G IN COMPL RRM1-2 OF PABP AND POLY(A)
Keywords TRANSLATION INITIATION, MRNA, EUKARYOTIC INITIATION FACTORS PAIP1 AND PAIP2, TRANSLATION-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4F02     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLYADENYLATE-BINDING PROTEIN 1  A 175 1376 0
2  RNA    B 9 195 0
3  Protein    C 20 149 0
4  Protein   POLYADENYLATE-BINDING PROTEIN 1  D 174 1376 0
5  RNA    E 9 198 0
6  Protein    F 20 157 0
7 Water     196 0 196
total       603 3451 196

Proteins
Unit 1 MET10 ALA11 SER12 LEU13 TYR14 VAL15 GLY16 ASP17 LEU18 HIS19 PRO20 ASP21 VAL22 THR23 GLU24 ALA25 MET26 LEU27 TYR28 GLU29 LYS30 PHE31 SER32 PRO33 ALA34 GLY35 PRO36 ILE37 LEU38 SER39 ILE40 ARG41 VAL42 CYS43 ARG44 ASP45 MET46 ILE47 THR48 ARG49 ARG50 SER51 LEU52 GLY53 TYR54 ALA55 TYR56 VAL57 ASN58 PHE59 GLN60 GLN61 PRO62 ALA63 ASP64 ALA65 GLU66 ARG67 ALA68 LEU69 ASP70 THR71 MET72 ASN73 PHE74 ASP75 VAL76 ILE77 LYS78 GLY79 LYS80 PRO81 VAL82 ARG83 ILE84 MET85 TRP86 SER87 GLN88 ARG89 ASP90 PRO91 SER92 LEU93 ARG94 LYS95 SER96 GLY97 VAL98 GLY99 ASN100 ILE101 PHE102 ILE103 LYS104 ASN105 LEU106 ASP107 LYS108 SER109 ILE110 ASP111 ASN112 LYS113 ALA114 LEU115 TYR116 ASP117 THR118 PHE119 SER120 ALA121 PHE122 GLY123 ASN124 ILE125 LEU126 SER127 CYS128 LYS129 VAL130 VAL131 CYS132 ASP133 GLU134 ASN135 GLY136 SER137 LYS138 GLY139 TYR140 GLY141 PHE142 VAL143 HIS144 PHE145 GLU146 THR147 GLN148 GLU149 ALA150 ALA151 GLU152 ARG153 ALA154 ILE155 GLU156 LYS157 MET158 ASN159 GLY160 MET161 LEU162 LEU163 ASN164 ASP165 ARG166 LYS167 VAL168 PHE169 VAL170 GLY171 ARG172 PHE173 LYS174 SER175 ARG176 LYS177 GLU178 ARG179 GLU180 ALA181 GLU182 LEU183 GLY184
Unit 3 THR179 ILE180 ARG181 ILE182 ARG183 ASP184 PRO185 ASN186 GLN187 GLY188 GLY189 LYS190 ASP191 ILE192 THR193 GLU194 GLU195 ILE196 MET197 SER198
Unit 4 MET10 ALA11 SER12 LEU13 TYR14 VAL15 GLY16 ASP17 LEU18 HIS19 PRO20 ASP21 VAL22 THR23 GLU24 ALA25 MET26 LEU27 TYR28 GLU29 LYS30 PHE31 SER32 PRO33 ALA34 GLY35 PRO36 ILE37 LEU38 SER39 ILE40 ARG41 VAL42 CYS43 ARG44 ASP45 MET46 ILE47 THR48 ARG49 ARG50 SER51 LEU52 GLY53 TYR54 ALA55 TYR56 VAL57 ASN58 PHE59 GLN60 GLN61 PRO62 ALA63 ASP64 ALA65 GLU66 ARG67 ALA68 LEU69 ASP70 THR71 MET72 ASN73 PHE74 ASP75 VAL76 ILE77 LYS78 GLY79 LYS80 PRO81 VAL82 ARG83 ILE84 MET85 TRP86 SER87 GLN88 ARG89 ASP90 PRO91 SER92 LEU93 ARG94 LYS95 SER96 GLY97 VAL98 GLY99 ASN100 ILE101 PHE102 ILE103 LYS104 ASN105 LEU106 ASP107 LYS108 SER109 ILE110 ASP111 ASN112 LYS113 ALA114 LEU115 TYR116 ASP117 THR118 PHE119 SER120 ALA121 PHE122 GLY123 ASN124 ILE125 LEU126 SER127 CYS128 LYS129 VAL130 VAL131 CYS132 ASP133 GLU134 ASN135 GLY136 SER137 LYS138 GLY139 TYR140 GLY141 PHE142 VAL143 HIS144 PHE145 GLU146 THR147 GLN148 GLU149 ALA150 ALA151 GLU152 ARG153 ALA154 ILE155 GLU156 LYS157 MET158 ASN159 GLY160 MET161 LEU162 LEU163 ASN164 ASP165 ARG166 LYS167 VAL168 PHE169 VAL170 GLY171 ARG172 PHE173 LYS174 SER175 ARG176 LYS177 GLU178 ARG179 GLU180 ALA181 GLU182 LEU183
Unit 6 THR179 ILE180 ARG181 ILE182 ARG183 ASP184 PRO185 ASN186 GLN187 GLY188 GLY189 LYS190 ASP191 ILE192 THR193 GLU194 GLU195 ILE196 MET197 SER198

Nucleic acids
Unit 2 A1 A2 A3 A4 A5 A6 A7 A8 A9
Unit 5 A1 A2 A3 A4 A5 A6 A7 A8 A9

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany