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Sequence, Chains, Asymmetric and Biological Units

Title MOUSE MBD4 GLYCOSYLASE DOMAIN IN COMPLEX WITH DNA CONTAINING SUGAR
Keywords STABLE INTERMEDIATE, N-GLYCOSIDIC BOND, HELIX-HAIRPIN-HELIX, GLYCOSYLASE, HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4EW4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   METHYL-CPG-BINDING DOMAIN PROTEIN 4  A 142 1176 0
2  Other macromolecule   DNA (5'-D(*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3')  B 11 224 0
3  Other macromolecule    C 11 200 11
4  Ligand   METHYL-CPG-BINDING DOMAIN PROTEIN 4  A 2 0 2
5 Water     17 0 18
total       183 1600 31

Proteins
Unit 1 LYS411 TRP412 THR413 PRO414 PRO415 ARG416 SER417 PRO418 PHE419 ASN420 LEU421 VAL422 GLN423 GLU424 ILE425 LEU426 PHE427 HIS428 ASP429 PRO430 TRP431 LYS432 LEU433 LEU434 ILE435 ALA436 THR437 ILE438 PHE439 LEU440 ASN441 ARG442 THR443 SER444 GLY445 LYS446 MET447 ALA448 ILE449 PRO450 VAL451 LEU452 TRP453 GLU454 PHE455 LEU456 GLU457 LYS458 TYR459 PRO460 SER461 ALA462 GLU463 VAL464 ALA465 ARG466 ALA467 ALA468 ASP469 TRP470 ARG471 ASP472 VAL473 SER474 GLU475 LEU476 LEU477 LYS478 PRO479 LEU480 GLY481 LEU482 TYR483 ASP484 LEU485 ARG486 ALA487 LYS488 THR489 ILE490 ILE491 LYS492 PHE493 SER494 ASP495 GLU496 TYR497 LEU498 THR499 LYS500 GLN501 TRP502 ARG503 TYR504 PRO505 ILE506 GLU507 LEU508 HIS509 GLY510 ILE511 GLY512 LYS513 TYR514 GLY515 ASN516 ASP517 SER518 TYR519 ARG520 ILE521 PHE522 CYS523 VAL524 ASN525 GLU526 TRP527 LYS528 GLN529 VAL530 HIS531 PRO532 GLU533 ASP534 HIS535 LYS536 LEU537 ASN538 LYS539 TYR540 HIS541 ASP542 TRP543 LEU544 TRP545 GLU546 ASN547 HIS548 GLU549 LYS550 LEU551 SER552

Other macromolecules
Unit 2 DT1 DC2 DA3 DG4 DC5 DG6 DC7 DA8 DT9 DG10 DG11
Unit 3 DC12 DC13 DA14 DT15 DG16 3DR17 DG18 DC19 DT20 DG21 DA22

Ligands
Unit 4 NI601 UNX602

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany