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Sequence, Chains, Asymmetric and Biological Units

Title HIV-1 NEF IN COMPLEX WITH MHC-I CYTOPLASMIC DOMAIN AND MU1 A SUBUNIT OF AP1 ADAPTOR (SECOND DOMAIN)
Keywords HUMAN IMMUNODEFICIENCY VIRUS 1, HIV, NEF, MHC-I, ANTIGEN PRESENTATION, HOST DEFENSE, ADAPTOR PROTEIN COMPLEX 1, MU1 SUBUNIT, SORTING MOTIF RECOGNITION, CLASP, MEMBRANE TRAFFIC VIRAL HIJACKING, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4EN2     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AP-1 COMPLEX SUBUNIT MU-1  M 256 2085 0
2  Protein   PROTEIN NEF  B 149 1238 0
3  Protein   PROTEIN NEF  C 133 1123 0
4  Protein   AP-1 COMPLEX SUBUNIT MU-1  A 255 2073 0
5  Protein   MHC-I  D 12 81 0
6  Protein   MHC-I  E 18 121 0
7 Water     52 0 53
total       875 6721 53

Proteins
Unit 1 SER158 TRP159 ARG160 SER161 GLU162 GLY163 ILE164 LYS165 TYR166 ARG167 LYS168 ASN169 GLU170 VAL171 PHE172 LEU173 ASP174 VAL175 ILE176 GLU177 ALA178 VAL179 ASN180 LEU181 LEU182 VAL183 SER184 ALA185 ASN186 GLY187 ASN188 VAL189 LEU190 ARG191 SER192 GLU193 ILE194 VAL195 GLY196 SER197 ILE198 LYS199 MET200 ARG201 VAL202 PHE203 LEU204 SER205 GLY206 MET207 PRO208 GLU209 LEU210 ARG211 LEU212 GLY213 LEU214 ASN215 ASP216 LYS217 VAL218 LEU219 PHE220 ASP221 ASN222 THR223 GLY224 ARG225 GLY226 LYS227 SER228 LYS229 SER230 VAL231 GLU232 LEU233 GLU234 ASP235 VAL236 LYS237 PHE238 HIS239 GLN240 CYS241 VAL242 ARG243 LEU244 SER245 ARG246 PHE247 GLU248 ASN249 ASP250 ARG251 THR252 ILE253 SER254 PHE255 ILE256 PRO257 PRO258 ASP259 GLY260 GLU261 PHE262 GLU263 LEU264 MET265 SER266 TYR267 ARG268 LEU269 ASN270 THR271 HIS272 VAL273 LYS274 PRO275 LEU276 ILE277 TRP278 ILE279 GLU280 SER281 VAL282 ILE283 GLU284 LYS285 HIS286 SER287 HIS288 SER289 ARG290 ILE291 GLU292 TYR293 MET294 VAL295 LYS296 ALA297 LYS298 SER299 GLN300 PHE301 LYS302 ARG303 ARG304 SER305 THR306 ALA307 ASN308 ASN309 VAL310 GLU311 ILE312 HIS313 ILE314 PRO315 VAL316 PRO317 ASN318 ASP319 ALA320 ASP321 SER322 PRO323 LYS324 PHE325 LYS326 THR327 THR328 VAL329 GLY330 SER331 VAL332 LYS333 TRP334 VAL335 PRO336 GLU337 ASN338 SER339 GLU340 ILE341 VAL342 TRP343 SER344 VAL345 LYS346 SER347 PHE348 PRO349 GLY350 GLY351 LYS352 GLU353 TYR354 LEU355 MET356 ARG357 ALA358 HIS359 PHE360 GLY361 LEU362 LYS373 PRO374 PRO375 ILE376 SER377 VAL378 LYS379 PHE380 GLU381 ILE382 PRO383 TYR384 PHE385 THR386 THR387 SER388 GLY389 ILE390 GLN391 VAL392 ARG393 TYR394 LEU395 LYS396 ILE397 ILE398 GLU399 LYS400 SER401 GLY402 TYR403 GLN404 ALA405 LEU406 PRO407 TRP408 VAL409 ARG410 TYR411 ILE412 THR413 GLN414 ASN415 GLY416 ASP417 TYR418 GLN419 LEU420 ARG421 THR422 GLN423
Unit 2 SER6 LYS7 SER8 SER9 VAL10 ILE11 GLY12 TRP13 PRO14 ALA15 VAL16 ARG17 GLU18 ARG19 MET20 ARG21 ARG22 ALA23 GLU24 PRO25 ALA26 GLU64 GLU65 VAL66 GLY67 PHE68 PRO69 VAL70 THR71 PRO72 GLN73 VAL74 PRO75 LEU76 ARG77 PRO78 MET79 THR80 TYR81 LYS82 ALA83 ALA84 VAL85 ASP86 LEU87 SER88 HIS89 PHE90 LEU91 LYS92 GLU93 LYS94 GLY95 GLY96 LEU97 GLU98 GLY99 LEU100 ILE101 HIS102 SER103 GLN104 ARG105 ARG106 GLN107 ASP108 ILE109 LEU110 ASP111 LEU112 TRP113 ILE114 TYR115 HIS116 THR117 GLN118 GLY119 TYR120 PHE121 PRO122 ASP123 TRP124 GLN125 ASN126 TYR127 THR128 PRO129 GLY130 PRO131 GLY132 VAL133 ARG134 TYR135 PRO136 LEU137 THR138 PHE139 GLY140 TRP141 CYS142 TYR143 LYS144 LEU145 VAL146 PRO147 VAL148 GLU149 PRO150 ASP151 LYS152 VAL153 GLU154 GLU155 ALA156 ASN157 LYS158 GLY159 GLU160 ASN161 ASP175 PRO176 GLU177 ARG178 GLU179 VAL180 LEU181 GLU182 TRP183 ARG184 PHE185 ASP186 SER187 ARG188 LEU189 ALA190 PHE191 HIS192 HIS193 VAL194 ALA195 ARG196 GLU197 LEU198 HIS199 PRO200 GLU201 TYR202 PHE203 LYS204
Unit 3 SER9 VAL10 ILE11 GLY12 TRP13 PRO14 ALA15 VAL16 ARG17 GLU18 ARG19 MET20 ARG21 ARG22 ALA23 GLU24 TRP57 LEU58 GLU59 ALA60 GLN61 GLU62 GLU63 GLU64 GLU65 VAL66 GLY67 PHE68 PRO69 VAL70 THR71 PRO72 GLN73 VAL74 PRO75 LEU76 ARG77 PRO78 MET79 THR80 TYR81 LYS82 ALA83 ALA84 VAL85 ASP86 LEU87 SER88 HIS89 PHE90 LEU91 LYS92 GLU93 LYS94 GLY95 GLY96 LEU97 GLU98 GLY99 LEU100 ILE101 HIS102 SER103 GLN104 ARG105 ARG106 GLN107 ASP108 ILE109 LEU110 ASP111 LEU112 TRP113 ILE114 TYR115 HIS116 THR117 GLN118 GLY119 TYR120 PHE121 PRO122 ASP123 TRP124 GLN125 ASN126 TYR127 THR128 PRO129 GLY130 PRO131 GLY132 VAL133 ARG134 TYR135 PRO136 LEU137 THR138 PHE139 GLY140 TRP141 CYS142 TYR143 LYS144 LEU145 VAL146 PRO147 VAL148 GLU179 VAL180 LEU181 GLU182 TRP183 ARG184 PHE185 ASP186 SER187 ARG188 LEU189 ALA190 PHE191 HIS192 HIS193 VAL194 ALA195 ARG196 GLU197 LEU198 HIS199 PRO200 GLU201 TYR202 PHE203
Unit 4 ARG160 SER161 GLU162 GLY163 ILE164 LYS165 TYR166 ARG167 LYS168 ASN169 GLU170 VAL171 PHE172 LEU173 ASP174 VAL175 ILE176 GLU177 ALA178 VAL179 ASN180 LEU181 LEU182 VAL183 SER184 ALA185 ASN186 GLY187 ASN188 VAL189 LEU190 ARG191 SER192 GLU193 ILE194 VAL195 GLY196 SER197 ILE198 LYS199 MET200 ARG201 VAL202 PHE203 LEU204 SER205 GLY206 MET207 PRO208 GLU209 LEU210 ARG211 LEU212 GLY213 LEU214 ASN215 ASP216 LYS217 VAL218 LEU219 PHE220 ASP221 ASN222 THR223 GLY224 ARG225 GLY226 LYS227 SER228 LYS229 SER230 VAL231 GLU232 LEU233 GLU234 ASP235 VAL236 LYS237 PHE238 HIS239 GLN240 CYS241 VAL242 ARG243 LEU244 SER245 ARG246 PHE247 GLU248 ASN249 ASP250 ARG251 THR252 ILE253 SER254 PHE255 ILE256 PRO257 PRO258 ASP259 GLY260 GLU261 PHE262 GLU263 LEU264 MET265 SER266 TYR267 ARG268 LEU269 ASN270 THR271 HIS272 VAL273 LYS274 PRO275 LEU276 ILE277 TRP278 ILE279 GLU280 SER281 VAL282 ILE283 GLU284 LYS285 HIS286 SER287 HIS288 SER289 ARG290 ILE291 GLU292 TYR293 MET294 VAL295 LYS296 ALA297 LYS298 SER299 GLN300 PHE301 LYS302 ARG303 ARG304 SER305 THR306 ALA307 ASN308 ASN309 VAL310 GLU311 ILE312 HIS313 ILE314 PRO315 VAL316 PRO317 ASN318 ASP319 ALA320 ASP321 SER322 PRO323 LYS324 PHE325 LYS326 THR327 THR328 VAL329 GLY330 SER331 VAL332 LYS333 TRP334 VAL335 PRO336 GLU337 ASN338 SER339 GLU340 ILE341 VAL342 TRP343 SER344 VAL345 LYS346 SER347 PHE348 PRO349 GLY350 GLY351 LYS352 GLU353 TYR354 LEU355 MET356 ARG357 ALA358 HIS359 PHE360 GLY361 LEU362 PRO363 LYS373 PRO374 PRO375 ILE376 SER377 VAL378 LYS379 PHE380 GLU381 ILE382 PRO383 TYR384 PHE385 THR386 THR387 SER388 GLY389 ILE390 GLN391 VAL392 ARG393 TYR394 LEU395 LYS396 ILE397 ILE398 GLU399 LYS400 SER401 GLY402 TYR403 GLN404 ALA405 LEU406 PRO407 TRP408 VAL409 ARG410 TYR411 ILE412 THR413 GLN414 ASN415 GLY416 ASP417 TYR418 GLN419 LEU420 ARG421 THR422 GLN423
Unit 5 SER319 TYR320 SER321 GLN322 ALA323 ALA324 GLY325 SER326 ASP327 SER328 ALA329 GLN330
Unit 6 ASP314 ARG315 LYS316 GLY317 GLY318 SER319 TYR320 SER321 GLN322 ALA323 ALA324 GLY325 SER326 ASP327 SER328 ALA329 GLN330 GLY331

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany