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Title | CRYSTAL STRUCTURE OF I-GZEII LAGLIDADG HOMING ENDONUCLEASE I WITH DNA TARGET SITE | |
Keywords | DNA-CUTTING ENZYME, HYDROLASE-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4EFJ | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | DNA TARGET SITE TOP STRAND | C | 27 | 565 | 0 |
2 | Other macromolecule | DNA TARGET SITE BOTTOM STRAND | D | 26 | 523 | 0 |
3 | Other macromolecule | DNA TARGET SITE TOP STRAND | E | 27 | 562 | 0 |
4 | Other macromolecule | DNA TARGET SITE BOTTOM STRAND | F | 26 | 520 | 0 |
5 | Protein | LAGLIDADG ENDONUCLEASE | A | 291 | 2329 | 0 |
6 | Protein | LAGLIDADG ENDONUCLEASE | B | 291 | 2314 | 0 |
7 | Ligand | DNA TARGET SITE TOP STRAND | C | 1 | 0 | 1 |
8 | Ligand | LAGLIDADG ENDONUCLEASE | A | 2 | 0 | 2 |
9 | Ligand | LAGLIDADG ENDONUCLEASE | B | 1 | 0 | 1 |
10 | Water | 29 | 0 | 29 | ||
total | 721 | 6813 | 33 |
Unit 5 | SER6 ILE7 ASN8 PRO9 TRP10 PHE11 VAL12 THR13 GLY14 PHE15 THR16 ASP17 ALA18 GLU19 GLY20 SER21 PHE22 MET23 ILE24 HIS25 LEU26 GLU27 LYS28 ASN29 LYS30 ASP31 LYS32 TRP33 ARG34 VAL35 ARG36 PRO37 THR38 PHE39 GLN40 ILE41 LYS42 LEU43 ASP44 ILE45 ARG46 ASP47 LYS48 SER49 LEU50 LEU51 GLU52 GLU53 ILE54 LYS55 ASN56 TYR57 PHE58 ASN59 ASN60 THR61 GLY62 SER63 ILE64 ASN65 THR66 SER67 ASN68 LYS69 GLU70 CYS71 VAL72 TYR73 LYS74 VAL75 ARG76 SER77 LEU78 LYS79 ASP80 ILE81 SER82 ILE83 ILE84 ILE85 SER86 HIS87 PHE88 ASP89 LYS90 TYR91 ASN92 LEU93 ILE94 THR95 GLN96 LYS97 LYS98 ALA99 ASP100 PHE101 GLU102 LEU103 PHE104 LYS105 LYS106 ILE107 ILE108 ASN109 LYS110 LEU111 ASN112 SER113 GLN114 GLU115 HIS116 LEU117 SER118 TYR119 GLU120 VAL121 GLY122 ALA123 THR124 VAL125 LEU126 GLN127 GLU128 ILE129 ILE130 SER131 ILE132 ARG133 ALA134 SER135 MET136 ASN137 LEU138 GLY139 LEU140 SER141 SER142 SER143 VAL144 LYS145 GLU146 ASP147 PHE148 PRO149 HIS150 ILE151 ILE152 PRO153 SER154 ASN155 ARG156 PRO157 LEU158 ILE159 GLU160 ASN161 MET162 ASN163 ILE164 PRO165 HIS166 PRO167 GLU168 TRP169 MET170 ALA171 GLY172 PHE173 VAL174 SER175 GLY176 GLU177 GLY178 SER179 PHE180 SER181 VAL182 TYR183 THR184 THR185 SER186 ASP187 ASP188 LYS189 TYR190 VAL191 SER192 LEU193 SER194 PHE195 ARG196 VAL197 SER198 GLN199 HIS200 ASN201 LYS202 ASP203 LYS204 GLN205 LEU206 LEU207 LYS208 SER209 PHE210 VAL211 ASP212 PHE213 PHE214 GLY215 CYS216 GLY217 GLY218 PHE219 ASN220 TYR221 HIS222 ASN223 LYS224 GLY225 ASN226 LYS227 ALA228 VAL229 ILE230 PHE231 VAL232 THR233 ARG234 LYS235 PHE236 GLU237 ASP238 ILE239 ASN240 ASP241 LYS242 ILE243 ILE244 PRO245 LEU246 PHE247 ASN248 GLU249 TYR250 LYS251 ILE252 LYS253 GLY254 VAL255 LYS256 TYR257 LYS258 ASP259 PHE260 LYS261 ASP262 TRP263 SER264 LYS265 VAL266 ALA267 LYS268 MET269 ILE270 GLU271 SER272 LYS273 SER274 HIS275 LEU276 THR277 THR278 ASN279 GLY280 TYR281 LYS282 GLU283 ILE284 CYS285 LYS286 ILE287 LYS288 GLU289 ASN290 MET291 ASN292 SER293 TYR294 ARG295 LYS296 |
Unit 6 | SER6 ILE7 ASN8 PRO9 TRP10 PHE11 VAL12 THR13 GLY14 PHE15 THR16 ASP17 ALA18 GLU19 GLY20 SER21 PHE22 MET23 ILE24 HIS25 LEU26 GLU27 LYS28 ASN29 LYS30 ASP31 LYS32 TRP33 ARG34 VAL35 ARG36 PRO37 THR38 PHE39 GLN40 ILE41 LYS42 LEU43 ASP44 ILE45 ARG46 ASP47 LYS48 SER49 LEU50 LEU51 GLU52 GLU53 ILE54 LYS55 ASN56 TYR57 PHE58 ASN59 ASN60 THR61 GLY62 SER63 ILE64 ASN65 THR66 SER67 ASN68 LYS69 GLU70 CYS71 VAL72 TYR73 LYS74 VAL75 ARG76 SER77 LEU78 LYS79 ASP80 ILE81 SER82 ILE83 ILE84 ILE85 SER86 HIS87 PHE88 ASP89 LYS90 TYR91 ASN92 LEU93 ILE94 THR95 GLN96 LYS97 LYS98 ALA99 ASP100 PHE101 GLU102 LEU103 PHE104 LYS105 LYS106 ILE107 ILE108 ASN109 LYS110 LEU111 ASN112 SER113 GLN114 GLU115 HIS116 LEU117 SER118 TYR119 GLU120 VAL121 GLY122 ALA123 THR124 VAL125 LEU126 GLN127 GLU128 ILE129 ILE130 SER131 ILE132 ARG133 ALA134 SER135 MET136 ASN137 LEU138 GLY139 LEU140 SER141 SER142 SER143 VAL144 LYS145 GLU146 ASP147 PHE148 PRO149 HIS150 ILE151 ILE152 PRO153 SER154 ASN155 ARG156 PRO157 LEU158 ILE159 GLU160 ASN161 MET162 ASN163 ILE164 PRO165 HIS166 PRO167 GLU168 TRP169 MET170 ALA171 GLY172 PHE173 VAL174 SER175 GLY176 GLU177 GLY178 SER179 PHE180 SER181 VAL182 TYR183 THR184 THR185 SER186 ASP187 ASP188 LYS189 TYR190 VAL191 SER192 LEU193 SER194 PHE195 ARG196 VAL197 SER198 GLN199 HIS200 ASN201 LYS202 ASP203 LYS204 GLN205 LEU206 LEU207 LYS208 SER209 PHE210 VAL211 ASP212 PHE213 PHE214 GLY215 CYS216 GLY217 GLY218 PHE219 ASN220 TYR221 HIS222 ASN223 LYS224 GLY225 ASN226 LYS227 ALA228 VAL229 ILE230 PHE231 VAL232 THR233 ARG234 LYS235 PHE236 GLU237 ASP238 ILE239 ASN240 ASP241 LYS242 ILE243 ILE244 PRO245 LEU246 PHE247 ASN248 GLU249 TYR250 LYS251 ILE252 LYS253 GLY254 VAL255 LYS256 TYR257 LYS258 ASP259 PHE260 LYS261 ASP262 TRP263 SER264 LYS265 VAL266 ALA267 LYS268 MET269 ILE270 GLU271 SER272 LYS273 SER274 HIS275 LEU276 THR277 THR278 ASN279 GLY280 TYR281 LYS282 GLU283 ILE284 CYS285 LYS286 ILE287 LYS288 GLU289 ASN290 MET291 ASN292 SER293 TYR294 ARG295 LYS296 |
Unit 1 | DG1 DG2 DA3 DT4 DG5 DG6 DG7 DT8 DA9 DC10 DC11 DA12 DT13 DA14 DT15 DT16 DG17 DG18 DT19 DA20 DC21 DA22 DA23 DA24 DG25 DG26 DG27 |
Unit 2 | DC1 DC2 DT3 DT4 DT5 DG6 DT7 DA8 DC9 DC10 DA11 DA12 DT13 DA14 DT15 DG16 DG17 DT18 DA19 DC20 DC21 DC22 DA23 DT24 DC25 DC26 |
Unit 3 | DG1 DG2 DA3 DT4 DG5 DG6 DG7 DT8 DA9 DC10 DC11 DA12 DT13 DA14 DT15 DT16 DG17 DG18 DT19 DA20 DC21 DA22 DA23 DA24 DG25 DG26 DG27 |
Unit 4 | DC1 DC2 DT3 DT4 DT5 DG6 DT7 DA8 DC9 DC10 DA11 DA12 DT13 DA14 DT15 DG16 DG17 DT18 DA19 DC20 DC21 DC22 DA23 DT24 DC25 DC26 |
Unit 7 | CA101 |
Unit 8 | CA401 CA402 |
Unit 9 | CA401 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |