Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BETA-PARVIN CH2 DOMAIN IN COMPLEX WITH LD1 MOTIF
Keywords CALPONIN HOMOLOGY DOMAIN, PROTEIN-PROTEIN INTERACTION, LD MO INTEGRIN SIGNALING, FOCAL ADHESION, ADAPTOR PROTEIN, PAXILL INTEGRIN LINKED KINASE, SIGNALING PROTEIN-CELL ADHESION COM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4EDN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-PARVIN  A 127 1043 0
2  Protein   BETA-PARVIN  B 126 1034 0
3  Protein   BETA-PARVIN  C 127 1043 0
4  Protein   BETA-PARVIN  D 125 1023 0
5  Protein   BETA-PARVIN  E 127 1043 0
6  Protein   BETA-PARVIN  F 125 1023 0
7  Protein   BETA-PARVIN  G 125 1023 0
8  Protein   BETA-PARVIN  H 125 1023 0
9  Protein   BETA-PARVIN  I 124 1015 0
10  Protein   BETA-PARVIN  J 125 1023 0
11  Protein   PAXILLIN  K 12 89 0
12  Protein   PAXILLIN  L 20 141 3
13  Protein   PAXILLIN  M 10 75 0
14  Protein   PAXILLIN  N 12 89 0
15  Protein   PAXILLIN  O 12 91 0
16  Protein   PAXILLIN  P 11 83 0
17  Protein   PAXILLIN  Q 14 104 0
18  Ligand   BETA-PARVIN  C 1 0 5
19 Water     37 0 38
total       1385 10965 46

Proteins
Unit 1 GLU238 ARG239 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 2 ARG239 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 3 GLU238 ARG239 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 4 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 5 GLU238 ARG239 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 6 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 7 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 8 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 9 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 10 ASP240 ALA241 PHE242 ASP243 THR244 LEU245 PHE246 ASP247 HIS248 ALA249 PRO250 ASP251 LYS252 LEU253 SER254 VAL255 VAL256 LYS257 LYS258 SER259 LEU260 ILE261 THR262 PHE263 VAL264 ASN265 LYS266 HIS267 LEU268 ASN269 LYS270 LEU271 ASN272 LEU273 GLU274 VAL275 THR276 GLU277 LEU278 GLU279 THR280 GLN281 PHE282 ALA283 ASP284 GLY285 VAL286 TYR287 LEU288 VAL289 LEU290 LEU291 MET292 GLY293 LEU294 LEU295 GLU296 ASP297 TYR298 PHE299 VAL300 PRO301 LEU302 HIS303 HIS304 PHE305 TYR306 LEU307 THR308 PRO309 GLU310 SER311 PHE312 ASP313 GLN314 LYS315 VAL316 HIS317 ASN318 VAL319 SER320 PHE321 ALA322 PHE323 GLU324 LEU325 MET326 LEU327 ASP328 GLY329 GLY330 LEU331 LYS332 LYS333 PRO334 LYS335 ALA336 ARG337 PRO338 GLU339 ASP340 VAL341 VAL342 ASN343 LEU344 ASP345 LEU346 LYS347 SER348 THR349 LEU350 ARG351 VAL352 LEU353 TYR354 ASN355 LEU356 PHE357 THR358 LYS359 TYR360 LYS361 ASN362 VAL363 GLU364
Unit 11 ASP2 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12 SER13
Unit 12 ACE0 MET1 ASP2 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12 SER13 THR14 THR15 SER16 HIS17 ILE18 SER19
Unit 13 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12
Unit 14 ASP2 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12 SER13
Unit 15 MET1 ASP2 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12
Unit 16 ASP2 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12
Unit 17 MET1 ASP2 ASP3 LEU4 ASP5 ALA6 LEU7 LEU8 ALA9 ASP10 LEU11 GLU12 SER13 THR14

Ligands
Unit 18 SO4401

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany