4EDA - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURES OF MONOMERIC HEMAGGLUTININ AND ITS COMPLEX WITH A FRAGMENT OF A NEUTRALIZING ANTIBODY THAT BINDS TO H1 SUBTYP INFLUENZA VIRUSES: MOLECULAR BASIS OF INFECTIVITY OF 2009 P H1N1 INFLUENZA A VIRUSES
• Keywords: INFLUENZA VIRUS, HAEMAGGLUTININ, CONFORMATION, ANTIBODY, VIR PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4EDA	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HEMAGGLUTININ	A	321	2508	0
2	Protein	HEMAGGLUTININ	B	148	1200	0
3	Protein	HEMAGGLUTININ	C	311	2432	0
4	Protein	HEMAGGLUTININ	D	115	910	0
5	Ligand		E	2	0	28
6	Ligand		F	2	0	28
7	Ligand	HEMAGGLUTININ	A	2	0	28
8	Ligand	HEMAGGLUTININ	C	2	0	28
9	Water			63	0	63
total				966	7050	175

Proteins

Unit 1	ASP 1 THR 2 LEU 3 CYS 4 ILE 5 GLY 6 TYR 7 HIS 8 ALA 9 ASN 10 ASN 11 SER 12 THR 13 ASP 14 THR 15 VAL 16 ASP 17 THR 18 VAL 19 LEU 20 GLU 21 LYS 22 ASN 23 VAL 24 THR 25 VAL 26 THR 27 HIS 28 SER 29 VAL 30 ASN 31 LEU 32 LEU 33 GLU 34 ASP 35 LYS 36 HIS 37 ASN 38 GLY 39 LYS 40 LEU 41 CYS 42 LYS 43 LEU 44 ARG 45 GLY 46 VAL 47 ALA 48 PRO 49 LEU 50 HIS 51 LEU 52 GLY 53 LYS 54 CYS 55 ASN 56 ILE 57 ALA 58 GLY 59 TRP 60 ILE 61 LEU 62 GLY 63 ASN 64 PRO 65 GLU 66 CYS 67 GLU 68 SER 69 LEU 70 SER 71 THR 72 ALA 73 SER 74 SER 75 TRP 76 SER 77 TYR 78 ILE 79 VAL 80 GLU 81 THR 82 SER 83 SER 84 SER 85 ASP 86 ASN 87 GLY 88 THR 89 CYS 90 TYR 91 PRO 92 GLY 93 ASP 94 PHE 95 ILE 96 ASP 97 TYR 98 GLU 99 GLU 100 LEU 101 ARG 102 GLU 103 GLN 104 LEU 105 SER 106 SER 107 VAL 108 SER 109 SER 110 PHE 111 GLU 112 ARG 113 PHE 114 GLU 115 ILE 116 PHE 117 PRO 118 LYS 119 THR 120 SER 121 SER 122 TRP 123 PRO 124 ASN 125 HIS 126 ASP 127 SER 128 ASN 129 LYS 130 GLY 131 VAL 132 THR 133 ALA 134 ALA 135 CYS 136 PRO 137 HIS 138 ALA 139 GLY 140 ALA 141 LYS 142 SER 143 PHE 144 TYR 145 LYS 146 ASN 147 LEU 148 ILE 149 TRP 150 LEU 151 VAL 152 LYS 153 LYS 154 GLY 155 ASN 156 SER 157 TYR 158 PRO 159 LYS 160 LEU 161 SER 162 LYS 163 SER 164 TYR 165 ILE 166 ASN 167 ASP 168 LYS 169 GLY 170 LYS 171 GLU 172 VAL 173 LEU 174 VAL 175 LEU 176 TRP 177 GLY 178 ILE 179 HIS 180 HIS 181 PRO 182 SER 183 THR 184 SER 185 ALA 186 ASP 187 GLN 188 GLN 189 SER 190 LEU 191 TYR 192 GLN 193 ASN 194 ALA 195 ASP 196 ALA 197 TYR 198 VAL 199 PHE 200 VAL 201 GLY 202 SER 203 SER 204 ARG 205 TYR 206 SER 207 LYS 208 LYS 209 PHE 210 LYS 211 PRO 212 GLU 213 ILE 214 ALA 215 ILE 216 ARG 217 PRO 218 LYS 219 VAL 220 ARG 221 ASP 222 GLN 223 GLU 224 GLY 225 ARG 226 MET 227 ASN 228 TYR 229 TYR 230 TRP 231 THR 232 LEU 233 VAL 234 GLU 235 PRO 236 GLY 237 ASP 238 LYS 239 ILE 240 THR 241 PHE 242 GLU 243 ALA 244 THR 245 GLY 246 ASN 247 LEU 248 VAL 249 VAL 250 PRO 251 ARG 252 TYR 253 ALA 254 PHE 255 ALA 256 MET 257 GLU 258 ARG 259 ASN 260 ALA 261 GLY 262 SER 263 GLY 264 ILE 265 ILE 266 ILE 267 SER 268 ASP 269 THR 270 PRO 271 VAL 272 HIS 273 ASP 274 CYS 275 ASN 276 THR 277 THR 278 CYS 279 GLN 280 THR 281 PRO 282 LYS 283 GLY 284 ALA 285 ILE 286 ASN 287 THR 288 SER 289 LEU 290 PRO 291 PHE 292 GLN 293 ASN 294 ILE 295 HIS 296 PRO 297 ILE 298 THR 299 ILE 300 GLY 301 LYS 302 CYS 303 PRO 304 LYS 305 TYR 306 VAL 307 LYS 308 SER 309 THR 310 LYS 311 LEU 312 ARG 313 LEU 314 ALA 315 THR 316 GLY 317 LEU 318 ARG 319 ASN 320 VAL 321
Unit 2	ILE 10 GLU 11 GLY 12 GLY 13 TRP 14 THR 15 GLY 16 MET 17 VAL 18 ASP 19 GLY 20 TRP 21 TYR 22 GLY 23 TYR 24 HIS 25 HIS 26 GLN 27 ASN 28 GLU 29 GLN 30 GLY 31 SER 32 GLY 33 TYR 34 ALA 35 ALA 36 ASP 37 LEU 38 LYS 39 SER 40 THR 41 GLN 42 ASN 43 ALA 44 ILE 45 ASP 46 GLU 47 ILE 48 THR 49 ASN 50 LYS 51 VAL 52 ASN 53 SER 54 VAL 55 ILE 56 GLU 57 LYS 58 MET 59 ASN 60 THR 61 GLN 62 PHE 63 THR 64 ALA 65 LYS 83 VAL 84 ASP 85 ASP 86 GLY 87 PHE 88 LEU 89 ASP 90 ILE 91 TRP 92 THR 93 TYR 94 ASN 95 ALA 96 GLU 97 LEU 98 LEU 99 VAL 100 LEU 101 LEU 102 GLU 103 ASN 104 GLU 105 ARG 106 THR 107 LEU 108 ASP 109 TYR 110 HIS 111 ASP 112 SER 113 ASN 114 VAL 115 LYS 116 ASN 117 LEU 118 TYR 119 GLU 120 LYS 121 VAL 122 ARG 123 SER 124 GLN 125 LEU 126 LYS 127 ASN 128 ASN 129 ALA 130 LYS 131 GLU 132 ILE 133 GLY 134 ASN 135 GLY 136 CYS 137 PHE 138 GLU 139 PHE 140 TYR 141 HIS 142 LYS 143 CYS 144 ASP 145 ASN 146 THR 147 CYS 148 MET 149 GLU 150 SER 151 VAL 152 LYS 153 ASN 154 GLY 155 THR 156 TYR 157 ASP 158 TYR 159 PRO 160 LYS 161 TYR 162 SER 163 GLU 164 GLU 165 ALA 166 LYS 167 LEU 168 ASN 169 ARG 170 GLU 171 GLU 172 ILE 173 ASP 174
Unit 3	ASN 11 SER 12 THR 13 ASP 14 THR 15 VAL 16 ASP 17 THR 18 VAL 19 LEU 20 GLU 21 LYS 22 ASN 23 VAL 24 THR 25 VAL 26 THR 27 HIS 28 SER 29 VAL 30 ASN 31 LEU 32 LEU 33 GLU 34 ASP 35 LYS 36 HIS 37 ASN 38 GLY 39 LYS 40 LEU 41 CYS 42 LYS 43 LEU 44 ARG 45 GLY 46 VAL 47 ALA 48 PRO 49 LEU 50 HIS 51 LEU 52 GLY 53 LYS 54 CYS 55 ASN 56 ILE 57 ALA 58 GLY 59 TRP 60 ILE 61 LEU 62 GLY 63 ASN 64 PRO 65 GLU 66 CYS 67 GLU 68 SER 69 LEU 70 SER 71 THR 72 ALA 73 SER 74 SER 75 TRP 76 SER 77 TYR 78 ILE 79 VAL 80 GLU 81 THR 82 SER 83 SER 84 SER 85 ASP 86 ASN 87 GLY 88 THR 89 CYS 90 TYR 91 PRO 92 GLY 93 ASP 94 PHE 95 ILE 96 ASP 97 TYR 98 GLU 99 GLU 100 LEU 101 ARG 102 GLU 103 GLN 104 LEU 105 SER 106 SER 107 VAL 108 SER 109 SER 110 PHE 111 GLU 112 ARG 113 PHE 114 GLU 115 ILE 116 PHE 117 PRO 118 LYS 119 THR 120 SER 121 SER 122 TRP 123 PRO 124 ASN 125 HIS 126 ASP 127 SER 128 ASN 129 LYS 130 GLY 131 VAL 132 THR 133 ALA 134 ALA 135 CYS 136 PRO 137 HIS 138 ALA 139 GLY 140 ALA 141 LYS 142 SER 143 PHE 144 TYR 145 LYS 146 ASN 147 LEU 148 ILE 149 TRP 150 LEU 151 VAL 152 LYS 153 LYS 154 GLY 155 ASN 156 SER 157 TYR 158 PRO 159 LYS 160 LEU 161 SER 162 LYS 163 SER 164 TYR 165 ILE 166 ASN 167 ASP 168 LYS 169 GLY 170 LYS 171 GLU 172 VAL 173 LEU 174 VAL 175 LEU 176 TRP 177 GLY 178 ILE 179 HIS 180 HIS 181 PRO 182 SER 183 THR 184 SER 185 ALA 186 ASP 187 GLN 188 GLN 189 SER 190 LEU 191 TYR 192 GLN 193 ASN 194 ALA 195 ASP 196 ALA 197 TYR 198 VAL 199 PHE 200 VAL 201 GLY 202 SER 203 SER 204 ARG 205 TYR 206 SER 207 LYS 208 LYS 209 PHE 210 LYS 211 PRO 212 GLU 213 ILE 214 ALA 215 ILE 216 ARG 217 PRO 218 LYS 219 VAL 220 ARG 221 ASP 222 GLN 223 GLU 224 GLY 225 ARG 226 MET 227 ASN 228 TYR 229 TYR 230 TRP 231 THR 232 LEU 233 VAL 234 GLU 235 PRO 236 GLY 237 ASP 238 LYS 239 ILE 240 THR 241 PHE 242 GLU 243 ALA 244 THR 245 GLY 246 ASN 247 LEU 248 VAL 249 VAL 250 PRO 251 ARG 252 TYR 253 ALA 254 PHE 255 ALA 256 MET 257 GLU 258 ARG 259 ASN 260 ALA 261 GLY 262 SER 263 GLY 264 ILE 265 ILE 266 ILE 267 SER 268 ASP 269 THR 270 PRO 271 VAL 272 HIS 273 ASP 274 CYS 275 ASN 276 THR 277 THR 278 CYS 279 GLN 280 THR 281 PRO 282 LYS 283 GLY 284 ALA 285 ILE 286 ASN 287 THR 288 SER 289 LEU 290 PRO 291 PHE 292 GLN 293 ASN 294 ILE 295 HIS 296 PRO 297 ILE 298 THR 299 ILE 300 GLY 301 LYS 302 CYS 303 PRO 304 LYS 305 TYR 306 VAL 307 LYS 308 SER 309 THR 310 LYS 311 LEU 312 ARG 313 LEU 314 ALA 315 THR 316 GLY 317 LEU 318 ARG 319 ASN 320 VAL 321
Unit 4	ILE 10 GLU 11 GLY 12 GLY 13 TRP 14 THR 15 GLY 16 MET 17 VAL 18 ASP 19 ALA 35 ALA 36 ASP 37 LEU 38 LYS 39 SER 40 THR 41 GLN 42 ASN 43 ALA 44 ILE 45 ASP 46 GLU 47 ILE 48 THR 49 ASN 50 LYS 51 VAL 52 ASN 53 SER 54 VAL 55 ILE 56 GLU 57 LYS 58 MET 59 ASN 60 THR 61 LYS 83 VAL 84 ASP 85 ASP 86 GLY 87 PHE 88 LEU 89 ASP 90 ILE 91 TRP 92 THR 93 TYR 94 ASN 95 ALA 96 GLU 97 LEU 98 LEU 99 VAL 100 LEU 101 LEU 102 GLU 103 ASN 104 GLU 105 ARG 106 THR 107 LEU 108 ASP 109 TYR 110 HIS 111 ASP 112 SER 113 ASN 114 VAL 115 LYS 116 ASN 117 LEU 118 TYR 119 GLU 120 LYS 121 VAL 122 ARG 123 SER 124 GLN 125 LEU 126 ASN 129 ALA 130 LYS 131 GLU 132 ILE 133 GLY 134 ASN 135 GLY 136 CYS 137 CYS 144 ASP 145 ASN 146 THR 147 CYS 148 MET 149 GLU 150 SER 151 VAL 152 LYS 153 ASN 154 GLY 155 TYR 159 PRO 160 LYS 161 TYR 162 SER 163 GLU 164 GLU 165 ALA 166 LYS 167 LEU 168 ASN 169 ARG 170 GLU 171

Ligands

Unit 5	NAG 1 NAG 2
Unit 6	NAG 1 NAG 2
Unit 7	NAG 403 NAG 404
Unit 8	NAG 403 NAG 404