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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF GCC(LCG)CCGC DUPLEX CONTAINING LNA RESI
Keywords CCG REPEATS, 5' SLIPPERY DUPLEXES, X-LINKED MENTAL RETARDATI HUNTINGTON'S DISEASE, MYOTONIC DYSTROPHY TYPE 1, LNA GUANOS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4E58     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    C 8 143 24
2  DNA/RNA    E 8 128 24
3  RNA    D 8 143 24
4  Ligand   RNA DUPLEX CONTAINING CCG REPEATS  C 1 0 5
5  Ligand   RNA DUPLEX CONTAINING CCG REPEATS  D 1 0 5
6 Water     14 0 14
total       40 414 96

Nucleic acids
Unit 1 G1 C2 C3 LCG4 C5 C6 G7 C8
Unit 2 G1 C2 C3 LCG4 C5 C6 G7 C8
Unit 3 G1 C2 C3 LCG4 C5 C6 G7 C8

Ligands
Unit 4 SO4101
Unit 5 SO4101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany