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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PIKA GITRL
Keywords GITRL, GLUCOCORTICOID-INDUCED TNF RECEPTOR LIGAND, IMMUNE SY TNFRSF18, STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCT GENOMICS RESEARCH CONSORTIUM, NYSGRC, IFN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4E4S     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 113 894 0
2  Protein    B 115 906 0
3  Protein    C 114 903 0
4  Protein    D 112 889 0
5  Protein    E 119 941 0
6  Protein    F 114 909 0
7  Ligand    A 1 0 6
8  Ligand    B 1 0 6
9  Ligand    C 2 0 12
10  Ligand    D 1 0 6
11  Ligand    E 2 0 12
12  Ligand    F 2 0 7
13 Water     241 0 241
total       937 5442 290

Proteins
Unit 1 PRO5 CYS6 VAL7 ALA8 LYS9 PHE10 GLY11 PRO12 SER13 PRO14 SER15 GLU16 TRP17 GLN18 MET19 ALA20 SER25 CYS26 LEU27 ASN28 LYS29 MET30 SER31 ASP32 TRP33 LYS34 LEU35 ARG36 ILE37 LEU38 GLN39 ASN40 GLY41 LEU42 TYR43 ALA44 ILE45 TYR46 GLY47 ARG48 VAL49 THR50 PRO51 ASN52 PRO53 THR54 TYR55 LYS56 GLY57 PHE58 ALA59 PRO60 PHE61 GLU62 VAL63 GLN64 LEU65 CYS66 LYS67 ASN68 LYS69 ASP70 ALA71 ILE72 GLN73 THR74 LEU75 THR76 ASP77 SER78 SER79 LYS80 ILE81 GLN82 ASN83 LEU84 GLY85 ASN86 ILE87 TYR88 GLU89 PHE90 ASN91 ALA92 GLY93 ASP94 THR95 ILE96 GLU97 LEU98 ARG99 PHE100 ASN101 SER102 ASP103 ASP104 GLN105 VAL106 LEU107 LYS108 THR109 ASN110 THR111 TYR112 PHE113 GLY114 ILE115 ILE116 LEU117 LEU118 ALA119 ASN120 PRO121
Unit 2 PRO5 CYS6 VAL7 ALA8 LYS9 PHE10 GLY11 PRO12 SER13 PRO14 SER15 GLU16 TRP17 GLN18 MET19 ALA20 SER21 SER22 GLU23 SER25 CYS26 LEU27 ASN28 LYS29 MET30 SER31 ASP32 TRP33 LYS34 LEU35 ARG36 ILE37 LEU38 GLN39 ASN40 GLY41 LEU42 TYR43 ALA44 ILE45 TYR46 GLY47 ARG48 VAL49 THR50 PRO51 ASN52 PRO53 THR54 TYR55 LYS56 GLY57 PHE58 ALA59 PRO60 PHE61 GLU62 VAL63 GLN64 LEU65 CYS66 LYS67 ASN68 ASP70 ALA71 ILE72 GLN73 THR74 LEU75 THR76 ASP77 SER78 SER79 LYS80 ILE81 GLN82 ASN83 LEU84 GLY85 ASN86 ILE87 TYR88 GLU89 PHE90 ASN91 ALA92 GLY93 ASP94 THR95 ILE96 GLU97 LEU98 ARG99 PHE100 ASN101 SER102 ASP103 ASP104 GLN105 VAL106 LEU107 LYS108 THR109 ASN110 THR111 TYR112 PHE113 GLY114 ILE115 ILE116 LEU117 LEU118 ALA119 ASN120 PRO121
Unit 3 PRO5 CYS6 VAL7 ALA8 LYS9 PHE10 GLY11 PRO12 SER13 PRO14 SER15 GLU16 TRP17 GLN18 MET19 ALA20 SER25 CYS26 LEU27 ASN28 LYS29 MET30 SER31 ASP32 TRP33 LYS34 LEU35 ARG36 ILE37 LEU38 GLN39 ASN40 GLY41 LEU42 TYR43 ALA44 ILE45 TYR46 GLY47 ARG48 VAL49 THR50 PRO51 ASN52 PRO53 THR54 TYR55 LYS56 GLY57 PHE58 ALA59 PRO60 PHE61 GLU62 VAL63 GLN64 LEU65 CYS66 LYS67 ASN68 LYS69 ASP70 ALA71 ILE72 GLN73 THR74 LEU75 THR76 ASP77 SER78 SER79 LYS80 ILE81 GLN82 ASN83 LEU84 GLY85 ASN86 ILE87 TYR88 GLU89 PHE90 ASN91 ALA92 GLY93 ASP94 THR95 ILE96 GLU97 LEU98 ARG99 PHE100 ASN101 SER102 ASP103 ASP104 GLN105 VAL106 LEU107 LYS108 THR109 ASN110 THR111 TYR112 PHE113 GLY114 ILE115 ILE116 LEU117 LEU118 ALA119 ASN120 PRO121 GLN122
Unit 4 PRO5 CYS6 VAL7 ALA8 LYS9 PHE10 GLY11 PRO12 SER13 PRO14 SER15 GLU16 TRP17 GLN18 MET19 SER25 CYS26 LEU27 ASN28 LYS29 MET30 SER31 ASP32 TRP33 LYS34 LEU35 ARG36 ILE37 LEU38 GLN39 ASN40 GLY41 LEU42 TYR43 ALA44 ILE45 TYR46 GLY47 ARG48 VAL49 THR50 PRO51 ASN52 PRO53 THR54 TYR55 LYS56 GLY57 PHE58 ALA59 PRO60 PHE61 GLU62 VAL63 GLN64 LEU65 CYS66 LYS67 ASN68 LYS69 ASP70 ALA71 ILE72 GLN73 THR74 LEU75 THR76 ASP77 SER78 SER79 LYS80 ILE81 GLN82 ASN83 LEU84 GLY85 ASN86 ILE87 TYR88 GLU89 PHE90 ASN91 ALA92 GLY93 ASP94 THR95 ILE96 GLU97 LEU98 ARG99 PHE100 ASN101 SER102 ASP103 ASP104 GLN105 VAL106 LEU107 LYS108 THR109 ASN110 THR111 TYR112 PHE113 GLY114 ILE115 ILE116 LEU117 LEU118 ALA119 ASN120 PRO121
Unit 5 LYS3 ASP4 PRO5 CYS6 VAL7 ALA8 LYS9 PHE10 GLY11 PRO12 SER13 PRO14 SER15 GLU16 TRP17 GLN18 MET19 ALA20 SER21 SER22 GLU23 SER25 CYS26 LEU27 ASN28 LYS29 MET30 SER31 ASP32 TRP33 LYS34 LEU35 ARG36 ILE37 LEU38 GLN39 ASN40 GLY41 LEU42 TYR43 ALA44 ILE45 TYR46 GLY47 ARG48 VAL49 THR50 PRO51 ASN52 PRO53 THR54 TYR55 LYS56 GLY57 PHE58 ALA59 PRO60 PHE61 GLU62 VAL63 GLN64 LEU65 CYS66 LYS67 ASN68 LYS69 ASP70 ALA71 ILE72 GLN73 THR74 LEU75 THR76 ASP77 SER78 SER79 LYS80 ILE81 GLN82 ASN83 LEU84 GLY85 ASN86 ILE87 TYR88 GLU89 PHE90 ASN91 ALA92 GLY93 ASP94 THR95 ILE96 GLU97 LEU98 ARG99 PHE100 ASN101 SER102 ASP103 ASP104 GLN105 VAL106 LEU107 LYS108 THR109 ASN110 THR111 TYR112 PHE113 GLY114 ILE115 ILE116 LEU117 LEU118 ALA119 ASN120 PRO121 GLN122
Unit 6 PRO5 CYS6 VAL7 ALA8 LYS9 PHE10 GLY11 PRO12 SER13 PRO14 SER15 GLU16 TRP17 GLN18 MET19 SER25 CYS26 LEU27 ASN28 LYS29 MET30 SER31 ASP32 TRP33 LYS34 LEU35 ARG36 ILE37 LEU38 GLN39 ASN40 GLY41 LEU42 TYR43 ALA44 ILE45 TYR46 GLY47 ARG48 VAL49 THR50 PRO51 ASN52 PRO53 THR54 TYR55 LYS56 GLY57 PHE58 ALA59 PRO60 PHE61 GLU62 VAL63 GLN64 LEU65 CYS66 LYS67 ASN68 LYS69 ASP70 ALA71 ILE72 GLN73 THR74 LEU75 THR76 ASP77 SER78 SER79 LYS80 ILE81 GLN82 ASN83 LEU84 GLY85 ASN86 ILE87 TYR88 GLU89 PHE90 ASN91 ALA92 GLY93 ASP94 THR95 ILE96 GLU97 LEU98 ARG99 PHE100 ASN101 SER102 ASP103 ASP104 GLN105 VAL106 LEU107 LYS108 THR109 ASN110 THR111 TYR112 PHE113 GLY114 ILE115 ILE116 LEU117 LEU118 ALA119 ASN120 PRO121 GLN122 PHE123

Ligands
Unit 7 GOL201
Unit 8 GOL201
Unit 9 GOL201 GOL202
Unit 10 GOL201
Unit 11 GOL201 GOL202
Unit 12 GOL201 MG202

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany