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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF NATIVE PROTEASE NEXIN-1 WITH HEPARIN
Keywords SERPIN, PROTEASE INHIBITOR, THROMBIN, CELL SURFACE, HYDROLAS INHIBITOR
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4DY0     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLIA-DERIVED NEXIN  A 362 2748 0
2  Protein   GLIA-DERIVED NEXIN  B 370 2832 0
3  Ligand    C 2 0 35
4  Ligand   GLIA-DERIVED NEXIN  A 2 0 11
5  Ligand   GLIA-DERIVED NEXIN  B 4 0 21
6 Water     248 0 248
total       988 5580 315
Proteins
Unit 1 PHE3 ASN4 PRO5 LEU6 SER7 LEU8 GLU9 GLU10 LEU11 GLY12 SER13 ASN14 THR15 GLY16 ILE17 GLN18 VAL19 PHE20 ASN21 GLN22 ILE23 VAL24 LYS25 SER26 ARG27 PRO28 HIS29 ASP30 ASN31 ILE32 VAL33 ILE34 SER35 PRO36 HIS37 GLY38 ILE39 ALA40 SER41 VAL42 LEU43 GLY44 MET45 LEU46 GLN47 LEU48 GLY49 ALA50 ASP51 GLY52 ARG53 THR54 LYS55 LYS56 GLN57 LEU58 ALA59 MET60 VAL61 MET62 ARG63 TYR64 GLY65 VAL66 ASN67 GLY68 VAL69 GLY70 LYS71 ILE72 LEU73 LYS74 LYS75 ILE76 ASN77 LYS78 ALA79 ILE80 VAL81 SER82 LYS83 LYS84 ASN85 LYS86 ASP87 ILE88 VAL89 THR90 VAL91 ALA92 ASN93 ALA94 VAL95 PHE96 VAL97 LYS98 ASN99 ALA100 SER101 GLU102 ILE103 GLU104 VAL105 PRO106 PHE107 VAL108 THR109 ARG110 ASN111 LYS112 ASP113 VAL114 PHE115 GLN116 CYS117 GLU118 VAL119 ARG120 ASN121 VAL122 ASN123 PHE124 GLU125 ASP126 PRO127 ALA128 SER129 ALA130 CYS131 ASP132 SER133 ILE134 ASN135 ALA136 TRP137 VAL138 LYS139 ASN140 GLU141 THR142 ARG143 ASP144 MET145 ILE146 ASP147 ASN148 LEU149 LEU150 SER151 PRO152 ASP153 LEU154 ILE155 ASP156 GLY157 VAL158 LEU159 THR160 ARG161 LEU162 VAL163 LEU164 VAL165 ASN166 ALA167 VAL168 TYR169 PHE170 LYS171 GLY172 LEU173 TRP174 LYS175 SER176 ARG177 PHE178 GLN179 PRO180 GLU181 ASN182 THR183 LYS184 LYS185 ARG186 THR187 PHE188 VAL189 ALA190 ALA191 ASP192 GLY193 LYS194 SER195 TYR196 GLN197 VAL198 PRO199 MET200 LEU201 ALA202 GLN203 LEU204 SER205 VAL206 PHE207 ARG208 CYS209 GLY210 SER211 THR212 SER213 ALA214 PRO215 ASN216 ASP217 LEU218 TRP219 TYR220 ASN221 PHE222 ILE223 GLU224 LEU225 PRO226 TYR227 HIS228 GLY229 GLU230 SER231 ILE232 SER233 MET234 LEU235 ILE236 ALA237 LEU238 PRO239 THR240 GLU241 SER242 SER243 THR244 PRO245 LEU246 SER247 ALA248 ILE249 ILE250 PRO251 HIS252 ILE253 SER254 THR255 LYS256 THR257 ILE258 ASP259 SER260 TRP261 MET262 SER263 ILE264 MET265 VAL266 PRO267 LYS268 ARG269 VAL270 GLN271 VAL272 ILE273 LEU274 PRO275 LYS276 PHE277 THR278 ALA279 VAL280 ALA281 GLN282 THR283 ASP284 LEU285 LYS286 GLU287 PRO288 LEU289 LYS290 VAL291 LEU292 GLY293 ILE294 THR295 ASP296 MET297 PHE298 ASP299 SER300 SER301 LYS302 ALA303 ASN304 PHE305 ALA306 LYS307 ILE308 THR309 THR310 ASN314 LEU315 HIS316 VAL317 SER318 HIS319 ILE320 LEU321 GLN322 LYS323 ALA324 LYS325 ILE326 GLU327 VAL328 SER329 GLU330 ASP331 GLY332 THR333 ARG346 SER347 SER348 PRO349 PRO350 TRP351 PHE352 ILE353 VAL354 ASP355 ARG356 PRO357 PHE358 LEU359 PHE360 PHE361 ILE362 ARG363 HIS364 ASN365 PRO366 THR367 GLY368 ALA369 VAL370 LEU371 PHE372 MET373 GLY374 GLN375 ILE376 ASN377 LYS378 PRO379
Unit 2 ASN4 PRO5 LEU6 SER7 LEU8 GLU9 GLU10 LEU11 GLY12 SER13 ASN14 THR15 GLY16 ILE17 GLN18 VAL19 PHE20 ASN21 GLN22 ILE23 VAL24 LYS25 SER26 ARG27 PRO28 HIS29 ASP30 ASN31 ILE32 VAL33 ILE34 SER35 PRO36 HIS37 GLY38 ILE39 ALA40 SER41 VAL42 LEU43 GLY44 MET45 LEU46 GLN47 LEU48 GLY49 ALA50 ASP51 GLY52 ARG53 THR54 LYS55 LYS56 GLN57 LEU58 ALA59 MET60 VAL61 MET62 ARG63 TYR64 GLY65 VAL66 ASN67 GLY68 VAL69 GLY70 LYS71 ILE72 LEU73 LYS74 LYS75 ILE76 ASN77 LYS78 ALA79 ILE80 VAL81 SER82 LYS83 LYS84 ASN85 LYS86 ASP87 ILE88 VAL89 THR90 VAL91 ALA92 ASN93 ALA94 VAL95 PHE96 VAL97 LYS98 ASN99 ALA100 SER101 GLU102 ILE103 GLU104 VAL105 PRO106 PHE107 VAL108 THR109 ARG110 ASN111 LYS112 ASP113 VAL114 PHE115 GLN116 CYS117 GLU118 VAL119 ARG120 ASN121 VAL122 ASN123 PHE124 GLU125 ASP126 PRO127 ALA128 SER129 ALA130 CYS131 ASP132 SER133 ILE134 ASN135 ALA136 TRP137 VAL138 LYS139 ASN140 GLU141 THR142 ARG143 ASP144 MET145 ILE146 ASP147 ASN148 LEU149 LEU150 SER151 PRO152 ASP153 LEU154 ILE155 ASP156 GLY157 VAL158 LEU159 THR160 ARG161 LEU162 VAL163 LEU164 VAL165 ASN166 ALA167 VAL168 TYR169 PHE170 LYS171 GLY172 LEU173 TRP174 LYS175 SER176 ARG177 PHE178 GLN179 PRO180 GLU181 ASN182 THR183 LYS184 LYS185 ARG186 THR187 PHE188 VAL189 ALA190 ALA191 ASP192 GLY193 LYS194 SER195 TYR196 GLN197 VAL198 PRO199 MET200 LEU201 ALA202 GLN203 LEU204 SER205 VAL206 PHE207 ARG208 CYS209 GLY210 SER211 THR212 SER213 ALA214 PRO215 ASN216 ASP217 LEU218 TRP219 TYR220 ASN221 PHE222 ILE223 GLU224 LEU225 PRO226 TYR227 HIS228 GLY229 GLU230 SER231 ILE232 SER233 MET234 LEU235 ILE236 ALA237 LEU238 PRO239 THR240 GLU241 SER242 SER243 THR244 PRO245 LEU246 SER247 ALA248 ILE249 ILE250 PRO251 HIS252 ILE253 SER254 THR255 LYS256 THR257 ILE258 ASP259 SER260 TRP261 MET262 SER263 ILE264 MET265 VAL266 PRO267 LYS268 ARG269 VAL270 GLN271 VAL272 ILE273 LEU274 PRO275 LYS276 PHE277 THR278 ALA279 VAL280 ALA281 GLN282 THR283 ASP284 LEU285 LYS286 GLU287 PRO288 LEU289 LYS290 VAL291 LEU292 GLY293 ILE294 THR295 ASP296 MET297 PHE298 ASP299 SER300 SER301 LYS302 ALA303 ASN304 PHE305 ALA306 LYS307 ILE308 THR309 THR310 GLY311 SER312 GLU313 ASN314 LEU315 HIS316 VAL317 SER318 HIS319 ILE320 LEU321 GLN322 LYS323 ALA324 LYS325 ILE326 GLU327 VAL328 SER329 GLU330 ASP331 GLY332 THR333 LYS334 ALA341 ILE342 LEU343 ILE344 ALA345 ARG346 SER347 SER348 PRO349 PRO350 TRP351 PHE352 ILE353 VAL354 ASP355 ARG356 PRO357 PHE358 LEU359 PHE360 PHE361 ILE362 ARG363 HIS364 ASN365 PRO366 THR367 GLY368 ALA369 VAL370 LEU371 PHE372 MET373 GLY374 GLN375 ILE376 ASN377 LYS378 PRO379
Ligands
Unit 3 IDS1 SGN2
Unit 4 SO4401 GOL404
Unit 5 SO4401 SO4402 SO4403 GOL404
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany