4DW2 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF UPA IN COMPLEX WITH THE FAB FRAGMEN 112
• Keywords: UROKINASE-TYPE PLASMINOGEN ACTIVATOR, ANTIBODY, SERINE PROTE ZYMOGEN, HYDROLASE-IMMUNE SYSTEM COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4DW2	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	UROKINASE-TYPE PLASMINOGEN ACTIVATOR	U	221	1763	0
2	Protein	FAB FRAGMENT OF PRO-UPA ANTIBODY MAB-112	H	210	1596	0
3	Protein	FAB FRAGMENT OF PRO-UPA ANTIBODY MAB-112	L	214	1648	0
4	Ligand	FAB FRAGMENT OF PRO-UPA ANTIBODY MAB-112	L	1	0	5
5	Water			10	0	10
total				656	5007	15

Proteins

Unit 1	PHE 21 THR 22 THR 23 ILE 24 GLU 25 ASN 26 GLN 27 PRO 28 TRP 29 PHE 30 ALA 31 ALA 32 ILE 33 TYR 34 ARG 35 ARG 36 VAL 38 THR 39 TYR 40 VAL 41 CYS 42 GLY 43 GLY 44 SER 45 LEU 46 ILE 47 SER 48 PRO 49 CYS 50 TRP 51 VAL 52 ILE 53 SER 54 ALA 55 THR 56 HIS 57 CYS 58 PHE 59 ILE 60 ASP 60A TYR 60B PRO 60C LYS 61 LYS 62 GLU 62A ASP 63 TYR 64 ILE 65 VAL 66 TYR 67 LEU 68 GLY 69 ARG 70 SER 71 ARG 72 LEU 73 ASN 74 SER 75 ASN 76 THR 77 GLN 78 GLY 79 GLU 80 MET 81 LYS 82 PHE 83 GLU 84 VAL 85 GLU 86 ASN 87 LEU 88 ILE 89 LEU 90 HIS 91 LYS 92 ASP 93 TYR 94 SER 95 ALA 96 ASP 97 THR 97A LEU 97B ALA 98 HIS 99 HIS 100 ASN 101 ASP 102 ILE 103 ALA 104 LEU 105 LEU 106 LYS 107 ILE 108 ARG 109 SER 110 LYS 110A GLU 110B GLY 110C ARG 110D CYS 111 ALA 112 GLN 113 PRO 114 SER 115 ARG 116 THR 117 ILE 118 GLN 119 THR 120 ILE 121 ALA 122 LEU 123 PRO 124 SER 125 MET 126 TYR 127 ASN 128 ASP 129 PRO 130 GLN 131 PHE 132 GLY 133 THR 134 SER 135 CYS 136 GLU 137 ILE 138 THR 139 GLY 140 PHE 141 GLY 142 LYS 143 GLU 144 GLN 145 SER 146 THR 147 ASP 148 TYR 149 LEU 150 TYR 151 PRO 152 GLU 153 GLN 154 LEU 155 LYS 156 MET 157 THR 158 VAL 159 VAL 160 LYS 161 LEU 162 ILE 163 SER 164 HIS 165 ARG 166 GLU 167 CYS 168 TYR 171 TYR 172 GLY 173 SER 174 GLU 175 VAL 176 THR 177 THR 178 LYS 179 MET 180 LEU 181 CYS 182 ALA 183 ALA 184 ASP 185 PRO 185A GLN 185B TRP 186 GLN 192 GLY 193 ASP 194 SER 195 GLY 196 GLY 197 PRO 198 LEU 199 VAL 200 CYS 201 SER 202 LEU 203 GLN 204 GLY 205 ARG 206 MET 207 THR 208 LEU 209 THR 210 GLY 211 ILE 212 VAL 213 SER 214 TRP 215 GLY 216 ARG 217 LYS 224 PRO 225 GLY 226 VAL 227 TYR 228 THR 229 ARG 230 VAL 231 SER 232 HIS 233 PHE 234 LEU 235 PRO 236 TRP 237 ILE 238 ARG 239 SER 240 HIS 241 THR 242 LYS 243
Unit 2	GLN 1 VAL 2 LYS 3 LEU 4 GLN 5 GLU 6 SER 7 GLY 8 GLY 9 ASP 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 LYS 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 ARG 31 TYR 32 ALA 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 THR 40 PRO 41 GLU 42 LYS 43 ARG 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 SER 50 ILE 51 THR 52 ASN 53 GLY 54 GLY 55 SER 56 THR 57 TYR 58 TYR 59 SER 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 ILE 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 ALA 74 ARG 75 ASN 76 ILE 77 LEU 78 SER 79 LEU 80 GLN 81 MET 82 SER 82A SER 82B LEU 82C ARG 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 MET 89 TYR 90 TYR 91 CYS 92 GLU 93 ARG 94 GLY 95 GLU 96 LEU 97 THR 98 TYR 99 ALA 100 MET 100A ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 THR 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 PRO 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 MET 129 VAL 130 THR 131 LEU 132 GLY 133 CYS 134 LEU 135 VAL 136 LYS 137 GLY 138 TYR 139 PHE 140 PRO 141 GLU 142 PRO 143 VAL 144 THR 145 VAL 146 THR 147 TRP 148 ASN 149 SER 150 GLY 151 SER 152 LEU 153 SER 154 SER 155 GLY 156 VAL 157 HIS 158 THR 159 PHE 160 PRO 161 ALA 162 VAL 163 LEU 164 GLN 165 SER 166 ASP 167 LEU 168 TYR 169 THR 170 LEU 171 SER 172 SER 173 SER 174 VAL 175 THR 176 VAL 177 PRO 178 SER 179 SER 180 THR 181 TRP 182 PRO 183 SER 184 GLU 185 THR 186 VAL 187 THR 188 CYS 189 ASN 190 VAL 191 ALA 192 HIS 193 PRO 194 ALA 195 SER 196 SER 197 THR 198 LYS 199 VAL 200 ASP 201 LYS 202 LYS 203 ILE 204 VAL 205 VAL 206 LYS 207 GLY 208
Unit 3	ASP 1 ILE 2 GLU 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 ILE 10 MET 11 SER 12 ALA 13 SER 14 PRO 15 GLY 16 GLU 17 LYS 18 VAL 19 THR 20 MET 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 SER 27 THR 27A VAL 28 SER 29 PHE 30 HIS 31 TYR 32 LEU 33 HIS 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 SER 40 GLY 41 ALA 42 SER 43 PRO 44 LYS 45 LEU 46 TRP 47 ILE 48 TYR 49 ALA 50 THR 51 SER 52 ASN 53 LEU 54 ALA 55 SER 56 GLY 57 VAL 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 SER 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 VAL 78 GLU 79 THR 80 GLU 81 ASP 82 ALA 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 HIS 90 TYR 91 SER 92 ALA 93 TYR 94 PRO 95 ARG 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 ASN 212 GLU 213 CYS 214

Ligands

Unit 4

SO4 301