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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A PEPTIDE DEFORMYLASE FROM SYNECHOCOCCU ELONGATUS
Keywords HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4DR8     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PEPTIDE DEFORMYLASE  A 188 1442 0
2  Protein   PEPTIDE DEFORMYLASE  B 187 1453 0
3  Protein   PEPTIDE DEFORMYLASE  C 185 1437 0
4  Protein   PEPTIDE DEFORMYLASE  D 183 1419 0
5  Ligand   PEPTIDE DEFORMYLASE  A 3 0 8
6  Ligand   PEPTIDE DEFORMYLASE  B 4 0 9
7  Ligand   PEPTIDE DEFORMYLASE  C 3 0 8
8  Ligand   PEPTIDE DEFORMYLASE  D 2 0 4
9 Water     980 0 980
total       1735 5751 1009
Proteins
Unit 1 THR2 ALA3 ALA4 VAL5 ALA6 ILE7 ARG8 VAL9 ALA10 LYS11 LYS12 LYS13 LEU14 ALA15 LYS16 PRO17 PRO18 LEU19 ASP20 LEU21 HIS22 TYR23 LEU24 GLY25 ASP26 ARG27 VAL28 LEU29 ARG30 GLN31 PRO32 ALA33 LYS34 ARG35 VAL36 SER37 ARG38 ILE39 ASP40 ASP41 GLU42 LEU43 ARG44 GLN45 THR46 ILE47 ARG48 GLN49 MET50 LEU51 GLN52 THR53 MET54 TYR55 SER56 ALA57 ASP58 GLY59 ILE60 GLY61 LEU62 ALA63 ALA64 PRO65 GLN66 VAL67 GLY68 ILE69 ASN70 LYS71 GLN72 LEU73 ILE74 VAL75 ILE76 ASP77 LEU78 GLU79 LEU80 GLU81 ASP82 GLU83 GLN84 ALA85 PRO86 PRO87 LEU88 VAL89 LEU90 ILE91 ASN92 PRO93 LYS94 ILE95 GLU96 ARG97 THR98 ALA99 GLY100 ASP101 LEU102 GLU103 GLN104 CYS105 GLN106 GLU107 GLY108 CYS109 LEU110 SER111 ILE112 PRO113 GLY114 VAL115 TYR116 LEU117 ASP118 VAL119 GLU120 ARG121 PRO122 GLU123 ILE124 VAL125 GLU126 VAL127 SER128 TYR129 LYS130 ASP131 GLU132 ASN133 GLY134 ARG135 PRO136 GLN137 ARG138 LEU139 VAL140 ALA141 ASP142 GLY143 LEU144 LEU145 ALA146 ARG147 CYS148 ILE149 GLN150 HIS151 GLU152 MET153 ASP154 HIS155 LEU156 ASN157 GLY158 VAL159 LEU160 PHE161 VAL162 ASP163 ARG164 VAL165 GLU166 ASN167 ARG168 LEU169 GLU170 LEU171 ASN172 GLU173 ALA174 LEU175 ASP176 LYS177 LYS178 GLY179 PHE180 ALA181 VAL182 GLN183 ALA184 VAL185 ARG186 PRO187 VAL188 ALA189
Unit 2 ALA4 VAL5 ALA6 ILE7 ARG8 VAL9 ALA10 LYS11 LYS12 LYS13 LEU14 ALA15 LYS16 PRO17 PRO18 LEU19 ASP20 LEU21 HIS22 TYR23 LEU24 GLY25 ASP26 ARG27 VAL28 LEU29 ARG30 GLN31 PRO32 ALA33 LYS34 ARG35 VAL36 SER37 ARG38 ILE39 ASP40 ASP41 GLU42 LEU43 ARG44 GLN45 THR46 ILE47 ARG48 GLN49 MET50 LEU51 GLN52 THR53 MET54 TYR55 SER56 ALA57 ASP58 GLY59 ILE60 GLY61 LEU62 ALA63 ALA64 PRO65 GLN66 VAL67 GLY68 ILE69 ASN70 LYS71 GLN72 LEU73 ILE74 VAL75 ILE76 ASP77 LEU78 GLU79 LEU80 GLU81 ASP82 GLU83 GLN84 ALA85 PRO86 PRO87 LEU88 VAL89 LEU90 ILE91 ASN92 PRO93 LYS94 ILE95 GLU96 ARG97 THR98 ALA99 GLY100 ASP101 LEU102 GLU103 GLN104 CYS105 GLN106 GLU107 GLY108 CYS109 LEU110 SER111 ILE112 PRO113 GLY114 VAL115 TYR116 LEU117 ASP118 VAL119 GLU120 ARG121 PRO122 GLU123 ILE124 VAL125 GLU126 VAL127 SER128 TYR129 LYS130 ASP131 GLU132 ASN133 GLY134 ARG135 PRO136 GLN137 ARG138 LEU139 VAL140 ALA141 ASP142 GLY143 LEU144 LEU145 ALA146 ARG147 CYS148 ILE149 GLN150 HIS151 GLU152 MET153 ASP154 HIS155 LEU156 ASN157 GLY158 VAL159 LEU160 PHE161 VAL162 ASP163 ARG164 VAL165 GLU166 ASN167 ARG168 LEU169 GLU170 LEU171 ASN172 GLU173 ALA174 LEU175 ASP176 LYS177 LYS178 GLY179 PHE180 ALA181 VAL182 GLN183 ALA184 VAL185 ARG186 PRO187 VAL188 ALA189 ALA190
Unit 3 ALA4 VAL5 ALA6 ILE7 ARG8 VAL9 ALA10 LYS11 LYS12 LYS13 LEU14 ALA15 LYS16 PRO17 PRO18 LEU19 ASP20 LEU21 HIS22 TYR23 LEU24 GLY25 ASP26 ARG27 VAL28 LEU29 ARG30 GLN31 PRO32 ALA33 LYS34 ARG35 VAL36 SER37 ARG38 ILE39 ASP40 ASP41 GLU42 LEU43 ARG44 GLN45 THR46 ILE47 ARG48 GLN49 MET50 LEU51 GLN52 THR53 MET54 TYR55 SER56 ALA57 ASP58 GLY59 ILE60 GLY61 LEU62 ALA63 ALA64 PRO65 GLN66 VAL67 GLY68 ILE69 ASN70 LYS71 GLN72 LEU73 ILE74 VAL75 ILE76 ASP77 LEU78 GLU79 LEU80 GLU81 ASP82 GLU83 GLN84 ALA85 PRO86 PRO87 LEU88 VAL89 LEU90 ILE91 ASN92 PRO93 LYS94 ILE95 GLU96 ARG97 THR98 ALA99 GLY100 ASP101 LEU102 GLU103 GLN104 CYS105 GLN106 GLU107 GLY108 CYS109 LEU110 SER111 ILE112 PRO113 GLY114 VAL115 TYR116 LEU117 ASP118 VAL119 GLU120 ARG121 PRO122 GLU123 ILE124 VAL125 GLU126 VAL127 SER128 TYR129 LYS130 ASP131 GLU132 ASN133 GLY134 ARG135 PRO136 GLN137 ARG138 LEU139 VAL140 ALA141 ASP142 GLY143 LEU144 LEU145 ALA146 ARG147 CYS148 ILE149 GLN150 HIS151 GLU152 MET153 ASP154 HIS155 LEU156 ASN157 GLY158 VAL159 LEU160 PHE161 VAL162 ASP163 ARG164 VAL165 GLU166 ASN167 ARG168 LEU169 GLU170 LEU171 ASN172 GLU173 ALA174 LEU175 ASP176 LYS177 LYS178 GLY179 PHE180 ALA181 VAL182 GLN183 ALA184 VAL185 ARG186 PRO187 VAL188
Unit 4 ALA6 ILE7 ARG8 VAL9 ALA10 LYS11 LYS12 LYS13 LEU14 ALA15 LYS16 PRO17 PRO18 LEU19 ASP20 LEU21 HIS22 TYR23 LEU24 GLY25 ASP26 ARG27 VAL28 LEU29 ARG30 GLN31 PRO32 ALA33 LYS34 ARG35 VAL36 SER37 ARG38 ILE39 ASP40 ASP41 GLU42 LEU43 ARG44 GLN45 THR46 ILE47 ARG48 GLN49 MET50 LEU51 GLN52 THR53 MET54 TYR55 SER56 ALA57 ASP58 GLY59 ILE60 GLY61 LEU62 ALA63 ALA64 PRO65 GLN66 VAL67 GLY68 ILE69 ASN70 LYS71 GLN72 LEU73 ILE74 VAL75 ILE76 ASP77 LEU78 GLU79 LEU80 GLU81 ASP82 GLU83 GLN84 ALA85 PRO86 PRO87 LEU88 VAL89 LEU90 ILE91 ASN92 PRO93 LYS94 ILE95 GLU96 ARG97 THR98 ALA99 GLY100 ASP101 LEU102 GLU103 GLN104 CYS105 GLN106 GLU107 GLY108 CYS109 LEU110 SER111 ILE112 PRO113 GLY114 VAL115 TYR116 LEU117 ASP118 VAL119 GLU120 ARG121 PRO122 GLU123 ILE124 VAL125 GLU126 VAL127 SER128 TYR129 LYS130 ASP131 GLU132 ASN133 GLY134 ARG135 PRO136 GLN137 ARG138 LEU139 VAL140 ALA141 ASP142 GLY143 LEU144 LEU145 ALA146 ARG147 CYS148 ILE149 GLN150 HIS151 GLU152 MET153 ASP154 HIS155 LEU156 ASN157 GLY158 VAL159 LEU160 PHE161 VAL162 ASP163 ARG164 VAL165 GLU166 ASN167 ARG168 LEU169 GLU170 LEU171 ASN172 GLU173 ALA174 LEU175 ASP176 LYS177 LYS178 GLY179 PHE180 ALA181 VAL182 GLN183 ALA184 VAL185 ARG186 PRO187 VAL188
Ligands
Unit 5 ZN201 EDO202 FMT203
Unit 6 ZN201 CL202 EDO203 FMT204
Unit 7 ZN201 EDO202 FMT203
Unit 8 ZN201 FMT202
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany