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Title | PHARMACOLOGICAL CHAPERONES FOR HUMAN ALPHA-N-ACETYLGALACTOSA | |
Keywords | BETA/ALPHA)8 BARREL, GLYCOSIDASE, CARBOHYDRATE-BINDING PROTE GLYCOPROTEIN, LYSOSOME, HYDROLASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4DO6 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ALPHA-N-ACETYLGALACTOSAMINIDASE | A | 388 | 3089 | 0 |
2 | Protein | ALPHA-N-ACETYLGALACTOSAMINIDASE | B | 400 | 3198 | 0 |
3 | Ligand | C | 3 | 0 | 39 | |
4 | Ligand | D | 5 | 0 | 61 | |
5 | Ligand | E | 3 | 0 | 38 | |
6 | Ligand | F | 5 | 0 | 61 | |
7 | Ligand | ALPHA-N-ACETYLGALACTOSAMINIDASE | A | 4 | 0 | 51 |
8 | Ligand | ALPHA-N-ACETYLGALACTOSAMINIDASE | B | 5 | 0 | 44 |
9 | Water | 786 | 0 | 786 | ||
total | 1599 | 6287 | 1080 |
Unit 1 | LEU18 ASP19 ASN20 GLY21 LEU22 LEU23 GLN24 THR25 PRO26 PRO27 MET28 GLY29 TRP30 LEU31 ALA32 TRP33 GLU34 ARG35 PHE36 ARG37 CYS38 ASN39 ILE40 ASN41 CYS42 ASP43 GLU44 ASP45 PRO46 LYS47 ASN48 CYS49 ILE50 SER51 GLU52 GLN53 LEU54 PHE55 MET56 GLU57 MET58 ALA59 ASP60 ARG61 MET62 ALA63 GLN64 ASP65 GLY66 TRP67 ARG68 ASP69 MET70 GLY71 TYR72 THR73 TYR74 LEU75 ASN76 ILE77 ASP78 ASP79 CYS80 TRP81 ILE82 GLY83 GLY84 ARG85 ASP86 ALA87 SER88 GLY89 ARG90 LEU91 MET92 PRO93 ASP94 PRO95 LYS96 ARG97 PHE98 PRO99 HIS100 GLY101 ILE102 PRO103 PHE104 LEU105 ALA106 ASP107 TYR108 VAL109 HIS110 SER111 LEU112 GLY113 LEU114 LYS115 LEU116 GLY117 ILE118 TYR119 ALA120 ASP121 MET122 GLY123 ASN124 PHE125 THR126 CYS127 MET128 GLY129 TYR130 PRO131 GLY132 THR133 THR134 LEU135 ASP136 LYS137 VAL138 VAL139 GLN140 ASP141 ALA142 GLN143 THR144 PHE145 ALA146 GLU147 TRP148 LYS149 VAL150 ASP151 MET152 LEU153 LYS154 LEU155 ASP156 GLY157 CYS158 PHE159 SER160 THR161 PRO162 GLU163 GLU164 ARG165 ALA166 GLN167 GLY168 TYR169 PRO170 LYS171 MET172 ALA173 ALA174 ALA175 LEU176 ASN177 ALA178 THR179 GLY180 ARG181 PRO182 ILE183 ALA184 PHE185 SER186 CYS187 SER188 TRP189 PRO190 ALA191 TYR192 GLU193 GLY194 GLY195 LEU196 PRO197 PRO198 ARG199 VAL200 GLN201 TYR202 SER203 LEU204 LEU205 ALA206 ASP207 ILE208 CYS209 ASN210 LEU211 TRP212 ARG213 ASN214 TYR215 ASP216 ASP217 ILE218 GLN219 ASP220 SER221 TRP222 TRP223 SER224 VAL225 LEU226 SER227 ILE228 LEU229 ASN230 TRP231 PHE232 VAL233 GLU234 HIS235 GLN236 ASP237 ILE238 LEU239 GLN240 PRO241 VAL242 ALA243 GLY244 PRO245 GLY246 HIS247 TRP248 ASN249 ASP250 PRO251 ASP252 MET253 LEU254 LEU255 ILE256 GLY257 ASN258 PHE259 GLY260 LEU261 SER262 LEU263 GLU264 GLN265 SER266 ARG267 ALA268 GLN269 MET270 ALA271 LEU272 TRP273 THR274 VAL275 LEU276 ALA277 ALA278 PRO279 LEU280 LEU281 MET282 SER283 THR284 ASP285 LEU286 ARG287 THR288 ILE289 SER290 ALA291 GLN292 ASN293 MET294 ASP295 ILE296 LEU297 GLN298 ASN299 PRO300 LEU301 MET302 ILE303 LYS304 ILE305 ASN306 GLN307 ASP308 PRO309 LEU310 GLY311 ILE312 GLN313 GLY314 ARG315 ARG316 ILE317 HIS318 LYS319 GLU320 LYS321 SER322 LEU323 ILE324 GLU325 VAL326 TYR327 MET328 ARG329 PRO330 LEU331 SER332 ASN333 LYS334 ALA335 SER336 ALA337 LEU338 VAL339 PHE340 PHE341 SER342 CYS343 ARG344 THR345 ASP346 MET347 PRO348 TYR349 ARG350 TYR351 HIS352 SER353 SER354 LEU355 GLY356 GLN357 LEU358 ASN359 PHE360 THR361 GLY362 SER363 VAL364 ILE365 TYR366 GLU367 ALA368 GLN369 ASP370 VAL371 TYR372 SER373 GLY374 ASP375 ILE376 ILE377 SER378 GLY379 LEU380 ARG381 ASP382 GLU383 THR384 ASN385 PHE386 THR387 VAL388 ILE389 ILE390 ASN391 PRO392 SER393 GLY394 VAL395 VAL396 MET397 TRP398 TYR399 LEU400 TYR401 PRO402 ILE403 LYS404 ASN405 |
Unit 2 | LEU18 ASP19 ASN20 GLY21 LEU22 LEU23 GLN24 THR25 PRO26 PRO27 MET28 GLY29 TRP30 LEU31 ALA32 TRP33 GLU34 ARG35 PHE36 ARG37 CYS38 ASN39 ILE40 ASN41 CYS42 ASP43 GLU44 ASP45 PRO46 LYS47 ASN48 CYS49 ILE50 SER51 GLU52 GLN53 LEU54 PHE55 MET56 GLU57 MET58 ALA59 ASP60 ARG61 MET62 ALA63 GLN64 ASP65 GLY66 TRP67 ARG68 ASP69 MET70 GLY71 TYR72 THR73 TYR74 LEU75 ASN76 ILE77 ASP78 ASP79 CYS80 TRP81 ILE82 GLY83 GLY84 ARG85 ASP86 ALA87 SER88 GLY89 ARG90 LEU91 MET92 PRO93 ASP94 PRO95 LYS96 ARG97 PHE98 PRO99 HIS100 GLY101 ILE102 PRO103 PHE104 LEU105 ALA106 ASP107 TYR108 VAL109 HIS110 SER111 LEU112 GLY113 LEU114 LYS115 LEU116 GLY117 ILE118 TYR119 ALA120 ASP121 MET122 GLY123 ASN124 PHE125 THR126 CYS127 MET128 GLY129 TYR130 PRO131 GLY132 THR133 THR134 LEU135 ASP136 LYS137 VAL138 VAL139 GLN140 ASP141 ALA142 GLN143 THR144 PHE145 ALA146 GLU147 TRP148 LYS149 VAL150 ASP151 MET152 LEU153 LYS154 LEU155 ASP156 GLY157 CYS158 PHE159 SER160 THR161 PRO162 GLU163 GLU164 ARG165 ALA166 GLN167 GLY168 TYR169 PRO170 LYS171 MET172 ALA173 ALA174 ALA175 LEU176 ASN177 ALA178 THR179 GLY180 ARG181 PRO182 ILE183 ALA184 PHE185 SER186 CYS187 SER188 TRP189 PRO190 ALA191 TYR192 GLU193 GLY194 GLY195 LEU196 PRO197 PRO198 ARG199 VAL200 GLN201 TYR202 SER203 LEU204 LEU205 ALA206 ASP207 ILE208 CYS209 ASN210 LEU211 TRP212 ARG213 ASN214 TYR215 ASP216 ASP217 ILE218 GLN219 ASP220 SER221 TRP222 TRP223 SER224 VAL225 LEU226 SER227 ILE228 LEU229 ASN230 TRP231 PHE232 VAL233 GLU234 HIS235 GLN236 ASP237 ILE238 LEU239 GLN240 PRO241 VAL242 ALA243 GLY244 PRO245 GLY246 HIS247 TRP248 ASN249 ASP250 PRO251 ASP252 MET253 LEU254 LEU255 ILE256 GLY257 ASN258 PHE259 GLY260 LEU261 SER262 LEU263 GLU264 GLN265 SER266 ARG267 ALA268 GLN269 MET270 ALA271 LEU272 TRP273 THR274 VAL275 LEU276 ALA277 ALA278 PRO279 LEU280 LEU281 MET282 SER283 THR284 ASP285 LEU286 ARG287 THR288 ILE289 SER290 ALA291 GLN292 ASN293 MET294 ASP295 ILE296 LEU297 GLN298 ASN299 PRO300 LEU301 MET302 ILE303 LYS304 ILE305 ASN306 GLN307 ASP308 PRO309 LEU310 GLY311 ILE312 GLN313 GLY314 ARG315 ARG316 ILE317 HIS318 LYS319 GLU320 LYS321 SER322 LEU323 ILE324 GLU325 VAL326 TYR327 MET328 ARG329 PRO330 LEU331 SER332 ASN333 LYS334 ALA335 SER336 ALA337 LEU338 VAL339 PHE340 PHE341 SER342 CYS343 ARG344 THR345 ASP346 MET347 PRO348 TYR349 ARG350 TYR351 HIS352 SER353 SER354 LEU355 GLY356 GLN357 LEU358 ASN359 PHE360 THR361 GLY362 SER363 VAL364 ILE365 TYR366 GLU367 ALA368 GLN369 ASP370 VAL371 TYR372 SER373 GLY374 ASP375 ILE376 ILE377 SER378 GLY379 LEU380 ARG381 ASP382 GLU383 THR384 ASN385 PHE386 THR387 VAL388 ILE389 ILE390 ASN391 PRO392 SER393 GLY394 VAL395 VAL396 MET397 TRP398 TYR399 LEU400 TYR401 PRO402 ILE403 LYS404 ASN405 LEU406 GLU407 MET408 SER409 GLN410 GLN411 HIS412 HIS413 HIS414 HIS415 HIS416 HIS417 |
Unit 3 | NAG1 NAG2 BMA3 |
Unit 4 | NAG1 NAG2 BMA3 MAN4 MAN5 |
Unit 5 | NAG1 NAG2 FUC3 |
Unit 6 | NAG1 NAG2 BMA3 MAN4 MAN5 |
Unit 7 | NAG509 CIT510 GLC511 GLC512 |
Unit 8 | NAG509 2PE510 BGC511 GLC512 2PE513 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |