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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF NUCLEOSIDE-DIPHOSPHATE KINASE FROM BORR BURGDORFERI
Keywords SSGCID, NUCLEOSIDE DIPHOSPHATE KINASE, KINASE, STRUCTURAL GE SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, TRAN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4DI6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  A 169 1354 0
2  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  B 169 1329 0
3  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  C 166 1328 0
4  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  D 169 1340 0
5  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  E 168 1350 0
6  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  F 168 1347 0
7 Water     431 0 431
total       1440 8048 431

Proteins
Unit 1 MET1 SER2 MET3 LEU4 LEU5 GLN6 LYS7 THR8 LEU9 CYS10 ILE11 VAL12 LYS13 PRO14 ASP15 GLY16 VAL17 ARG18 ARG19 GLY20 LEU21 ILE22 GLY23 ASP24 VAL25 VAL26 SER27 ARG28 PHE29 GLU30 ARG31 VAL32 GLY33 LEU34 LYS35 MET36 VAL37 ALA38 ALA39 LYS40 MET41 LEU42 ILE43 VAL44 ASP45 GLU46 SER47 LEU48 ALA49 LYS50 LYS51 HIS52 TYR53 LEU54 TYR55 ASP56 ASP57 ILE58 VAL59 PHE60 ARG61 HIS62 SER63 GLU64 ALA65 VAL66 TRP67 ASN68 SER69 LEU70 ILE71 LYS72 PHE73 ILE74 SER75 ASN76 SER77 PRO78 VAL79 PHE80 THR81 PHE82 VAL83 VAL84 GLU85 GLY86 VAL87 GLU88 SER89 ILE90 GLU91 VAL92 VAL93 ARG94 LYS95 LEU96 CYS97 GLY98 ALA99 THR100 GLU101 PRO102 LYS103 LEU104 ALA105 ILE106 PRO107 GLY108 THR109 ILE110 ARG111 GLY112 ASP113 PHE114 SER115 TYR116 HIS117 SER118 PHE119 LYS120 TYR121 SER122 ASN123 GLU124 LYS125 GLY126 PHE127 SER128 ILE129 TYR130 ASN131 VAL132 ILE133 HIS134 ALA135 SER136 ALA137 ASN138 GLU139 ALA140 ASP141 ALA142 MET143 ARG144 GLU145 ILE146 PRO147 ILE148 TRP149 PHE150 LYS151 ASP152 ASN153 GLU154 ILE155 LEU156 ASN157 TYR158 LYS159 ARG160 ASP161 ASP162 GLU163 CYS164 GLU165 HIS166 TYR167 TYR168 CYS169
Unit 2 MET1 SER2 MET3 LEU4 LEU5 GLN6 LYS7 THR8 LEU9 CYS10 ILE11 VAL12 LYS13 PRO14 ASP15 GLY16 VAL17 ARG18 ARG19 GLY20 LEU21 ILE22 GLY23 ASP24 VAL25 VAL26 SER27 ARG28 PHE29 GLU30 ARG31 VAL32 GLY33 LEU34 LYS35 MET36 VAL37 ALA38 ALA39 LYS40 MET41 LEU42 ILE43 VAL44 ASP45 GLU46 SER47 LEU48 ALA49 LYS50 LYS51 HIS52 TYR53 LEU54 TYR55 ASP56 ASP57 ILE58 VAL59 PHE60 ARG61 HIS62 SER63 GLU64 ALA65 VAL66 TRP67 ASN68 SER69 LEU70 ILE71 LYS72 PHE73 ILE74 SER75 ASN76 SER77 PRO78 VAL79 PHE80 THR81 PHE82 VAL83 VAL84 GLU85 GLY86 VAL87 GLU88 SER89 ILE90 GLU91 VAL92 VAL93 ARG94 LYS95 LEU96 CYS97 GLY98 ALA99 THR100 GLU101 PRO102 LYS103 LEU104 ALA105 ILE106 PRO107 GLY108 THR109 ILE110 ARG111 GLY112 ASP113 PHE114 SER115 TYR116 HIS117 SER118 PHE119 LYS120 TYR121 SER122 ASN123 GLU124 LYS125 GLY126 PHE127 SER128 ILE129 TYR130 ASN131 VAL132 ILE133 HIS134 ALA135 SER136 ALA137 ASN138 GLU139 ALA140 ASP141 ALA142 MET143 ARG144 GLU145 ILE146 PRO147 ILE148 TRP149 PHE150 LYS151 ASP152 ASN153 GLU154 ILE155 LEU156 ASN157 TYR158 LYS159 ARG160 ASP161 ASP162 GLU163 CYS164 GLU165 HIS166 TYR167 TYR168 CYS169
Unit 3 LEU4 LEU5 GLN6 LYS7 THR8 LEU9 CYS10 ILE11 VAL12 LYS13 PRO14 ASP15 GLY16 VAL17 ARG18 ARG19 GLY20 LEU21 ILE22 GLY23 ASP24 VAL25 VAL26 SER27 ARG28 PHE29 GLU30 ARG31 VAL32 GLY33 LEU34 LYS35 MET36 VAL37 ALA38 ALA39 LYS40 MET41 LEU42 ILE43 VAL44 ASP45 GLU46 SER47 LEU48 ALA49 LYS50 LYS51 HIS52 TYR53 LEU54 TYR55 ASP56 ASP57 ILE58 VAL59 PHE60 ARG61 HIS62 SER63 GLU64 ALA65 VAL66 TRP67 ASN68 SER69 LEU70 ILE71 LYS72 PHE73 ILE74 SER75 ASN76 SER77 PRO78 VAL79 PHE80 THR81 PHE82 VAL83 VAL84 GLU85 GLY86 VAL87 GLU88 SER89 ILE90 GLU91 VAL92 VAL93 ARG94 LYS95 LEU96 CYS97 GLY98 ALA99 THR100 GLU101 PRO102 LYS103 LEU104 ALA105 ILE106 PRO107 GLY108 THR109 ILE110 ARG111 GLY112 ASP113 PHE114 SER115 TYR116 HIS117 SER118 PHE119 LYS120 TYR121 SER122 ASN123 GLU124 LYS125 GLY126 PHE127 SER128 ILE129 TYR130 ASN131 VAL132 ILE133 HIS134 ALA135 SER136 ALA137 ASN138 GLU139 ALA140 ASP141 ALA142 MET143 ARG144 GLU145 ILE146 PRO147 ILE148 TRP149 PHE150 LYS151 ASP152 ASN153 GLU154 ILE155 LEU156 ASN157 TYR158 LYS159 ARG160 ASP161 ASP162 GLU163 CYS164 GLU165 HIS166 TYR167 TYR168 CYS169
Unit 4 MET1 SER2 MET3 LEU4 LEU5 GLN6 LYS7 THR8 LEU9 CYS10 ILE11 VAL12 LYS13 PRO14 ASP15 GLY16 VAL17 ARG18 ARG19 GLY20 LEU21 ILE22 GLY23 ASP24 VAL25 VAL26 SER27 ARG28 PHE29 GLU30 ARG31 VAL32 GLY33 LEU34 LYS35 MET36 VAL37 ALA38 ALA39 LYS40 MET41 LEU42 ILE43 VAL44 ASP45 GLU46 SER47 LEU48 ALA49 LYS50 LYS51 HIS52 TYR53 LEU54 TYR55 ASP56 ASP57 ILE58 VAL59 PHE60 ARG61 HIS62 SER63 GLU64 ALA65 VAL66 TRP67 ASN68 SER69 LEU70 ILE71 LYS72 PHE73 ILE74 SER75 ASN76 SER77 PRO78 VAL79 PHE80 THR81 PHE82 VAL83 VAL84 GLU85 GLY86 VAL87 GLU88 SER89 ILE90 GLU91 VAL92 VAL93 ARG94 LYS95 LEU96 CYS97 GLY98 ALA99 THR100 GLU101 PRO102 LYS103 LEU104 ALA105 ILE106 PRO107 GLY108 THR109 ILE110 ARG111 GLY112 ASP113 PHE114 SER115 TYR116 HIS117 SER118 PHE119 LYS120 TYR121 SER122 ASN123 GLU124 LYS125 GLY126 PHE127 SER128 ILE129 TYR130 ASN131 VAL132 ILE133 HIS134 ALA135 SER136 ALA137 ASN138 GLU139 ALA140 ASP141 ALA142 MET143 ARG144 GLU145 ILE146 PRO147 ILE148 TRP149 PHE150 LYS151 ASP152 ASN153 GLU154 ILE155 LEU156 ASN157 TYR158 LYS159 ARG160 ASP161 ASP162 GLU163 CYS164 GLU165 HIS166 TYR167 TYR168 CYS169
Unit 5 SER2 MET3 LEU4 LEU5 GLN6 LYS7 THR8 LEU9 CYS10 ILE11 VAL12 LYS13 PRO14 ASP15 GLY16 VAL17 ARG18 ARG19 GLY20 LEU21 ILE22 GLY23 ASP24 VAL25 VAL26 SER27 ARG28 PHE29 GLU30 ARG31 VAL32 GLY33 LEU34 LYS35 MET36 VAL37 ALA38 ALA39 LYS40 MET41 LEU42 ILE43 VAL44 ASP45 GLU46 SER47 LEU48 ALA49 LYS50 LYS51 HIS52 TYR53 LEU54 TYR55 ASP56 ASP57 ILE58 VAL59 PHE60 ARG61 HIS62 SER63 GLU64 ALA65 VAL66 TRP67 ASN68 SER69 LEU70 ILE71 LYS72 PHE73 ILE74 SER75 ASN76 SER77 PRO78 VAL79 PHE80 THR81 PHE82 VAL83 VAL84 GLU85 GLY86 VAL87 GLU88 SER89 ILE90 GLU91 VAL92 VAL93 ARG94 LYS95 LEU96 CYS97 GLY98 ALA99 THR100 GLU101 PRO102 LYS103 LEU104 ALA105 ILE106 PRO107 GLY108 THR109 ILE110 ARG111 GLY112 ASP113 PHE114 SER115 TYR116 HIS117 SER118 PHE119 LYS120 TYR121 SER122 ASN123 GLU124 LYS125 GLY126 PHE127 SER128 ILE129 TYR130 ASN131 VAL132 ILE133 HIS134 ALA135 SER136 ALA137 ASN138 GLU139 ALA140 ASP141 ALA142 MET143 ARG144 GLU145 ILE146 PRO147 ILE148 TRP149 PHE150 LYS151 ASP152 ASN153 GLU154 ILE155 LEU156 ASN157 TYR158 LYS159 ARG160 ASP161 ASP162 GLU163 CYS164 GLU165 HIS166 TYR167 TYR168 CYS169
Unit 6 SER2 MET3 LEU4 LEU5 GLN6 LYS7 THR8 LEU9 CYS10 ILE11 VAL12 LYS13 PRO14 ASP15 GLY16 VAL17 ARG18 ARG19 GLY20 LEU21 ILE22 GLY23 ASP24 VAL25 VAL26 SER27 ARG28 PHE29 GLU30 ARG31 VAL32 GLY33 LEU34 LYS35 MET36 VAL37 ALA38 ALA39 LYS40 MET41 LEU42 ILE43 VAL44 ASP45 GLU46 SER47 LEU48 ALA49 LYS50 LYS51 HIS52 TYR53 LEU54 TYR55 ASP56 ASP57 ILE58 VAL59 PHE60 ARG61 HIS62 SER63 GLU64 ALA65 VAL66 TRP67 ASN68 SER69 LEU70 ILE71 LYS72 PHE73 ILE74 SER75 ASN76 SER77 PRO78 VAL79 PHE80 THR81 PHE82 VAL83 VAL84 GLU85 GLY86 VAL87 GLU88 SER89 ILE90 GLU91 VAL92 VAL93 ARG94 LYS95 LEU96 CYS97 GLY98 ALA99 THR100 GLU101 PRO102 LYS103 LEU104 ALA105 ILE106 PRO107 GLY108 THR109 ILE110 ARG111 GLY112 ASP113 PHE114 SER115 TYR116 HIS117 SER118 PHE119 LYS120 TYR121 SER122 ASN123 GLU124 LYS125 GLY126 PHE127 SER128 ILE129 TYR130 ASN131 VAL132 ILE133 HIS134 ALA135 SER136 ALA137 ASN138 GLU139 ALA140 ASP141 ALA142 MET143 ARG144 GLU145 ILE146 PRO147 ILE148 TRP149 PHE150 LYS151 ASP152 ASN153 GLU154 ILE155 LEU156 ASN157 TYR158 LYS159 ARG160 ASP161 ASP162 GLU163 CYS164 GLU165 HIS166 TYR167 TYR168 CYS169

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany